| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is guaA [H]
Identifier: 103486127
GI number: 103486127
Start: 643677
End: 645290
Strand: Reverse
Name: guaA [H]
Synonym: Sala_0634
Alternate gene names: 103486127
Gene position: 645290-643677 (Counterclockwise)
Preceding gene: 103486129
Following gene: 103486125
Centisome position: 19.29
GC content: 65.49
Gene sequence:
>1614_bases ATGGCCCGGCTTCCTTATCGGCCAGCCATGCCGACTCCCGACCCCTCCGCCGCCCCTGAATCGATCCTGATCATCGACTT CGGATCGCAAGTCACCCAGCTCATCGCCCGTCGCGTCCGCGAGGCGGGCGTGTATAGCGAGATTGTCCCGTTCAGCGCCG CCGAGGCGGCGCTCGCACGGATGCGGCCCAAGGGGGTGATCCTGTCAGGATCGCCCGCGTCGGTTCCCGCCGAGGGCAGC CCGCGCGCACCCCGGTCGATCTTTGACAGCGGCCTGCCGATCCTGGGCATCTGTTACGGCCAGCAGGTGATGAGCCAGCA GCTCGGCGGAAAAGTCGAACCCGGCGGCATCGATGGCGAACGCGACGGCGAATTCGGCCGCGCCTTCCTGACCGTCACCG AACCCTGCGTGCTGTTCGATGGGCTGTGGCAGGTCGGCGAACGGCATCAGGTGTGGATGAGCCACGGCGACCGCGTGACC CGGTTCGCGCCGGGTTTCCGTATCGTGGCAGTCAGCGACGGCGCGCCTTTCGCAGTCATCGCGAATGACGAGCGCCGCTA TTATGGTACCCAATTCCACCCCGAAGTCGTCCATACCCCCGACGGCGCGAAGCTGATCGCCAATTTCGTGCGCCACGTCT GCGGGTGCAGCGGCGACTGGACGATGGCCGAGTTTCGCACCACCAAGATCGCCGAAATCCGCGCACAGGTCGGCGACCAG CGCGTGCTGTGCGGCCTGTCGGGCGGGGTCGACAGCGCGGTCGCCGCGGTGCTGATCCACGAAGCGATCGGCGAACAGCT GACCTGCGTTTTCGTCGACCACGGCCTCTTGCGCATGAACGAGCGCGAACAGGTCGAACGCCTGTTCCGCGACCATTACA ACATCCCGCTGGTCGTCGTCGACGCCGAGGAGCGCTTCATGGCGGGGCTTGCGGGCATCACCGACCCCGAACAGAAGCGC AAGTTCATCGGCGCCGAGTTCATCAATGTGTTCGAGGAAGAGGCCAGGAAGATCGGCGGCGCCGATTTCCTCGCGCAAGG CACGCTCTATCCCGATGTGATCGAGAGCGTCAGCTTCACCGGCGGGCCGAGCGTCACGATCAAGAGTCATCACAATGTCG GCGGCCTGCCCGAACGCATGAACATGAAGCTCGTCGAGCCGCTGCGCGAGCTGTTCAAGGACGAGGTCCGCCTGCTCGGC AAGGAGCTGGGCCTGCCCGACATTTTTGTCGGCCGCCACCCCTTCCCCGGCCCCGGCCTCGCGATCCGCATTCCAGGCGA AGTCAGCAAAGAGCGCTGCGACATCCTCCGCAAGGCCGATGCGGTCTATCTCGAGGAAATCCGCAACGCCGGGCTGTACG ATGCGATCTGGCAGGCGTTTGCGGTGCTCCTGCCGGTCAAGACGGTCGGCGTGATGGGCGACGGGCGCACTTACGACCAT GTCTGCGCGCTGCGCGCCGTGACCTCGACCGATGGCATGACCGCCGACATCTATCCCTTCGACGCCAGCTTCCTGAGCCG CTGCGCGACGCGCATCATCAACGAGGTGCAGGGCATCAACCGGGTGGTGTATGATTATACGTCGAAGCCGCCGGGGACGA TCGAGTGGGAGTGA
Upstream 100 bases:
>100_bases CGCCCTGCTTGTCGCGGCGTTCACCTATGTCGCAATTGTCGCAACAATGTGTCGGGGACACGGCCGTTCGACGAGCAGCC CATATCGACCGCTGGACAGC
Downstream 100 bases:
>100_bases CGCGCTAGTCCGCGGCGACCACGGTCGCGTCCGCTGGTGCGGCAACCATCGAACCCCACCAGTCGCCAAGCGCGTCGATC AGCGGCACCAGCCTTTCGCC
Product: GMP synthase
Products: NA
Alternate protein names: GMP synthetase; Glutamine amidotransferase [H]
Number of amino acids: Translated: 537; Mature: 536
Protein sequence:
>537_residues MARLPYRPAMPTPDPSAAPESILIIDFGSQVTQLIARRVREAGVYSEIVPFSAAEAALARMRPKGVILSGSPASVPAEGS PRAPRSIFDSGLPILGICYGQQVMSQQLGGKVEPGGIDGERDGEFGRAFLTVTEPCVLFDGLWQVGERHQVWMSHGDRVT RFAPGFRIVAVSDGAPFAVIANDERRYYGTQFHPEVVHTPDGAKLIANFVRHVCGCSGDWTMAEFRTTKIAEIRAQVGDQ RVLCGLSGGVDSAVAAVLIHEAIGEQLTCVFVDHGLLRMNEREQVERLFRDHYNIPLVVVDAEERFMAGLAGITDPEQKR KFIGAEFINVFEEEARKIGGADFLAQGTLYPDVIESVSFTGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRLLG KELGLPDIFVGRHPFPGPGLAIRIPGEVSKERCDILRKADAVYLEEIRNAGLYDAIWQAFAVLLPVKTVGVMGDGRTYDH VCALRAVTSTDGMTADIYPFDASFLSRCATRIINEVQGINRVVYDYTSKPPGTIEWE
Sequences:
>Translated_537_residues MARLPYRPAMPTPDPSAAPESILIIDFGSQVTQLIARRVREAGVYSEIVPFSAAEAALARMRPKGVILSGSPASVPAEGS PRAPRSIFDSGLPILGICYGQQVMSQQLGGKVEPGGIDGERDGEFGRAFLTVTEPCVLFDGLWQVGERHQVWMSHGDRVT RFAPGFRIVAVSDGAPFAVIANDERRYYGTQFHPEVVHTPDGAKLIANFVRHVCGCSGDWTMAEFRTTKIAEIRAQVGDQ RVLCGLSGGVDSAVAAVLIHEAIGEQLTCVFVDHGLLRMNEREQVERLFRDHYNIPLVVVDAEERFMAGLAGITDPEQKR KFIGAEFINVFEEEARKIGGADFLAQGTLYPDVIESVSFTGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRLLG KELGLPDIFVGRHPFPGPGLAIRIPGEVSKERCDILRKADAVYLEEIRNAGLYDAIWQAFAVLLPVKTVGVMGDGRTYDH VCALRAVTSTDGMTADIYPFDASFLSRCATRIINEVQGINRVVYDYTSKPPGTIEWE >Mature_536_residues ARLPYRPAMPTPDPSAAPESILIIDFGSQVTQLIARRVREAGVYSEIVPFSAAEAALARMRPKGVILSGSPASVPAEGSP RAPRSIFDSGLPILGICYGQQVMSQQLGGKVEPGGIDGERDGEFGRAFLTVTEPCVLFDGLWQVGERHQVWMSHGDRVTR FAPGFRIVAVSDGAPFAVIANDERRYYGTQFHPEVVHTPDGAKLIANFVRHVCGCSGDWTMAEFRTTKIAEIRAQVGDQR VLCGLSGGVDSAVAAVLIHEAIGEQLTCVFVDHGLLRMNEREQVERLFRDHYNIPLVVVDAEERFMAGLAGITDPEQKRK FIGAEFINVFEEEARKIGGADFLAQGTLYPDVIESVSFTGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRLLGK ELGLPDIFVGRHPFPGPGLAIRIPGEVSKERCDILRKADAVYLEEIRNAGLYDAIWQAFAVLLPVKTVGVMGDGRTYDHV CALRAVTSTDGMTADIYPFDASFLSRCATRIINEVQGINRVVYDYTSKPPGTIEWE
Specific function: Catalyzes the synthesis of GMP from XMP [H]
COG id: COG0519
COG function: function code F; GMP synthase, PP-ATPase domain/subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GMP-binding domain [H]
Homologues:
Organism=Homo sapiens, GI4504035, Length=569, Percent_Identity=36.5553602811951, Blast_Score=306, Evalue=3e-83, Organism=Escherichia coli, GI1788854, Length=521, Percent_Identity=55.8541266794626, Blast_Score=580, Evalue=1e-167, Organism=Caenorhabditis elegans, GI71992710, Length=575, Percent_Identity=37.7391304347826, Blast_Score=302, Evalue=2e-82, Organism=Caenorhabditis elegans, GI71992717, Length=575, Percent_Identity=37.7391304347826, Blast_Score=302, Evalue=2e-82, Organism=Caenorhabditis elegans, GI133901714, Length=578, Percent_Identity=37.5432525951557, Blast_Score=301, Evalue=5e-82, Organism=Saccharomyces cerevisiae, GI6323873, Length=525, Percent_Identity=52.7619047619048, Blast_Score=535, Evalue=1e-153, Organism=Drosophila melanogaster, GI281365319, Length=554, Percent_Identity=34.4765342960289, Blast_Score=274, Evalue=1e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006220 - InterPro: IPR001317 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR001674 - InterPro: IPR004739 - InterPro: IPR022955 - InterPro: IPR022310 - InterPro: IPR014729 [H]
Pfam domain/function: PF00117 GATase; PF00958 GMP_synt_C; PF02540 NAD_synthase [H]
EC number: =6.3.5.2 [H]
Molecular weight: Translated: 58837; Mature: 58706
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLPYRPAMPTPDPSAAPESILIIDFGSQVTQLIARRVREAGVYSEIVPFSAAEAALAR CCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHH MRPKGVILSGSPASVPAEGSPRAPRSIFDSGLPILGICYGQQVMSQQLGGKVEPGGIDGE CCCCCEEEECCCCCCCCCCCCCCCHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCC RDGEFGRAFLTVTEPCVLFDGLWQVGERHQVWMSHGDRVTRFAPGFRIVAVSDGAPFAVI CCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHCCCEEEEECCCEEEEEECCCCCEEEE ANDERRYYGTQFHPEVVHTPDGAKLIANFVRHVCGCSGDWTMAEFRTTKIAEIRAQVGDQ ECCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC RVLCGLSGGVDSAVAAVLIHEAIGEQLTCVFVDHGLLRMNEREQVERLFRDHYNIPLVVV EEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHCCCCHHHHHHHHHHCCCCCEEEE DAEERFMAGLAGITDPEQKRKFIGAEFINVFEEEARKIGGADFLAQGTLYPDVIESVSFT CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHCCCC GGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRLLGKELGLPDIFVGRHPFPGPGL CCCEEEEECCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCE AIRIPGEVSKERCDILRKADAVYLEEIRNAGLYDAIWQAFAVLLPVKTVGVMGDGRTYDH EEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEECCCCCCHHH VCALRAVTSTDGMTADIYPFDASFLSRCATRIINEVQGINRVVYDYTSKPPGTIEWE HHHHHEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCC >Mature Secondary Structure ARLPYRPAMPTPDPSAAPESILIIDFGSQVTQLIARRVREAGVYSEIVPFSAAEAALAR CCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHH MRPKGVILSGSPASVPAEGSPRAPRSIFDSGLPILGICYGQQVMSQQLGGKVEPGGIDGE CCCCCEEEECCCCCCCCCCCCCCCHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCC RDGEFGRAFLTVTEPCVLFDGLWQVGERHQVWMSHGDRVTRFAPGFRIVAVSDGAPFAVI CCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHCCCEEEEECCCEEEEEECCCCCEEEE ANDERRYYGTQFHPEVVHTPDGAKLIANFVRHVCGCSGDWTMAEFRTTKIAEIRAQVGDQ ECCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC RVLCGLSGGVDSAVAAVLIHEAIGEQLTCVFVDHGLLRMNEREQVERLFRDHYNIPLVVV EEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHCCCCHHHHHHHHHHCCCCCEEEE DAEERFMAGLAGITDPEQKRKFIGAEFINVFEEEARKIGGADFLAQGTLYPDVIESVSFT CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHCCCC GGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRLLGKELGLPDIFVGRHPFPGPGL CCCEEEEECCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCE AIRIPGEVSKERCDILRKADAVYLEEIRNAGLYDAIWQAFAVLLPVKTVGVMGDGRTYDH EEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEECCCCCCHHH VCALRAVTSTDGMTADIYPFDASFLSRCATRIINEVQGINRVVYDYTSKPPGTIEWE HHHHHEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA