Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486072

Identifier: 103486072

GI number: 103486072

Start: 589863

End: 590150

Strand: Reverse

Name: 103486072

Synonym: Sala_0579

Alternate gene names: NA

Gene position: 590150-589863 (Counterclockwise)

Preceding gene: 103486073

Following gene: 103486071

Centisome position: 17.64

GC content: 58.68

Gene sequence:

>288_bases
GTGATCAATGTCCAATGGTCGCAGGCAGCGACCGAAGACCTCTTGAACAATGCCGACGGCCTCTATCTGGTCGATTTCGA
TCTCGCGGACGCGTTGCTGTCCGAAGCCGAGCGCGCGAGCGACTTTCTGGCGCTTACACCGCGCGCCGGTTCGCTGGTCG
ATGCACATGGTCTGCGAAAATGGCGTTTGGGCCAGCTTCCATTTGCCCTACTGTATGATGTGAATGCGGAACGGCTCCTC
GTCCTTCGTGTCGTCCATTTGCGCAGCGACTGGCAAACCCTCCTGTGA

Upstream 100 bases:

>100_bases
GATCTGCCCGCGAGGAGCCGCTGATCTCGCACGAAGAGATGAAAAAGCTGATCGCCGCGAAGCGCGCCGAACTCCGTTCA
AAGCACGATAAAGCGACAGC

Downstream 100 bases:

>100_bases
TCCCCACCGGTCTCCTGGGCGGCAGCTTCAACCCTGCGCATGGCGGGCATCGCGCGATCAGTTTGAACGCGATCGATTCG
CTGCACCTCGACGAACTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MINVQWSQAATEDLLNNADGLYLVDFDLADALLSEAERASDFLALTPRAGSLVDAHGLRKWRLGQLPFALLYDVNAERLL
VLRVVHLRSDWQTLL

Sequences:

>Translated_95_residues
MINVQWSQAATEDLLNNADGLYLVDFDLADALLSEAERASDFLALTPRAGSLVDAHGLRKWRLGQLPFALLYDVNAERLL
VLRVVHLRSDWQTLL
>Mature_95_residues
MINVQWSQAATEDLLNNADGLYLVDFDLADALLSEAERASDFLALTPRAGSLVDAHGLRKWRLGQLPFALLYDVNAERLL
VLRVVHLRSDWQTLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10690; Mature: 10690

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINVQWSQAATEDLLNNADGLYLVDFDLADALLSEAERASDFLALTPRAGSLVDAHGLRK
CCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCEEEECCCCCCEECCCCCCC
WRLGQLPFALLYDVNAERLLVLRVVHLRSDWQTLL
CCCCCCCEEEEEECCCCHHHHHHHHHHHCCHHHCC
>Mature Secondary Structure
MINVQWSQAATEDLLNNADGLYLVDFDLADALLSEAERASDFLALTPRAGSLVDAHGLRK
CCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCEEEECCCCCCEECCCCCCC
WRLGQLPFALLYDVNAERLLVLRVVHLRSDWQTLL
CCCCCCCEEEEEECCCCHHHHHHHHHHHCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA