| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486073
Identifier: 103486073
GI number: 103486073
Start: 590147
End: 590419
Strand: Reverse
Name: 103486073
Synonym: Sala_0580
Alternate gene names: NA
Gene position: 590419-590147 (Counterclockwise)
Preceding gene: 103486074
Following gene: 103486072
Centisome position: 17.65
GC content: 60.07
Gene sequence:
>273_bases ATGGATGCTACGACGCCGATCACGACGCGGCTTGACGCCGTAACCCTGGAAACGCTCGACAGATTGGCGGAACGCTATGA TCGCTCGCGCTCGTGGCTCGTTGCGCAGGCGGTTCGACAGTTTGTCGAACGCGAAGCCGAGATGCTCGCAATCATCGAGG AAGGCGAGCGATCTGCCCGCGAGGAGCCGCTGATCTCGCACGAAGAGATGAAAAAGCTGATCGCCGCGAAGCGCGCCGAA CTCCGTTCAAAGCACGATAAAGCGACAGCGTGA
Upstream 100 bases:
>100_bases CCGGTCGCGCTGGAAGGGCTGACGACGTACAAGTGGCTGGTGCGCGGGAGCGGACAGTTGCGGCCTTGAGTCGTTTGTAT ACAAATGATATGTGCACAGC
Downstream 100 bases:
>100_bases TCAATGTCCAATGGTCGCAGGCAGCGACCGAAGACCTCTTGAACAATGCCGACGGCCTCTATCTGGTCGATTTCGATCTC GCGGACGCGTTGCTGTCCGA
Product: CopG family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MDATTPITTRLDAVTLETLDRLAERYDRSRSWLVAQAVRQFVEREAEMLAIIEEGERSAREEPLISHEEMKKLIAAKRAE LRSKHDKATA
Sequences:
>Translated_90_residues MDATTPITTRLDAVTLETLDRLAERYDRSRSWLVAQAVRQFVEREAEMLAIIEEGERSAREEPLISHEEMKKLIAAKRAE LRSKHDKATA >Mature_90_residues MDATTPITTRLDAVTLETLDRLAERYDRSRSWLVAQAVRQFVEREAEMLAIIEEGERSAREEPLISHEEMKKLIAAKRAE LRSKHDKATA
Specific function: Unknown
COG id: COG3905
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10351; Mature: 10351
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDATTPITTRLDAVTLETLDRLAERYDRSRSWLVAQAVRQFVEREAEMLAIIEEGERSAR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEPLISHEEMKKLIAAKRAELRSKHDKATA CCCCCCHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MDATTPITTRLDAVTLETLDRLAERYDRSRSWLVAQAVRQFVEREAEMLAIIEEGERSAR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEPLISHEEMKKLIAAKRAELRSKHDKATA CCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA