| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is nadD [H]
Identifier: 103486071
GI number: 103486071
Start: 589213
End: 589866
Strand: Reverse
Name: nadD [H]
Synonym: Sala_0578
Alternate gene names: 103486071
Gene position: 589866-589213 (Counterclockwise)
Preceding gene: 103486072
Following gene: 103486070
Centisome position: 17.63
GC content: 65.29
Gene sequence:
>654_bases GTGATCCCCACCGGTCTCCTGGGCGGCAGCTTCAACCCTGCGCATGGCGGGCATCGCGCGATCAGTTTGAACGCGATCGA TTCGCTGCACCTCGACGAACTCTGGTGGCTCGTCTCGCCGGGCAATCCCTTGAAGCCGAAAGCAGGCATGGCGCCCCTCC CCGCGCGGCTCGCCTCGGCGCGGCGCATGGCGCGGCGCGCGCCGATCCGCGCGACGGGAATCGAGGCCGAGCTTGGCACC CGCTACACGATCGACACGCTCAAAAAGCTCGTCCGCCGCTATCCTGACCGCCAGTTTATCTGGATCATGGGCGCCGACAA TCTGGTCCAACTGCCCCGATGGCGCGACTGGCGGGGCATTGCGCGTTTGATGCCGATTGCGGTTATCGCGCGTCCGGGCT ATAATGACCGTGCCCATGCAAGACGTGCGATGGGATGGCTTCGGCGCTTTGTCCGGCCCGCAGACCAGAAAAGCCATTGG ACAGACTGGAGACCGCCCGCCCTCGTGTTCCTGCGATTTTCGCCCGATGTGCGATCCGCGACTGCGATGCGGCAGGCCAA CCCCCGCTGGTTCGAACGCTATGAAGGCCGCGCGCTGCGCGATCCGGTCACACGTTCGCGGCTGGTGGAACCGACCAAGA AAGGACGCATTTGA
Upstream 100 bases:
>100_bases GTTTGGGCCAGCTTCCATTTGCCCTACTGTATGATGTGAATGCGGAACGGCTCCTCGTCCTTCGTGTCGTCCATTTGCGC AGCGACTGGCAAACCCTCCT
Downstream 100 bases:
>100_bases TCTCCGCCACCCAGGGGGCCGCGCCGGGCGCCGCTCCTGCCAATGACAGCGTGGACGCGCTCCACGCGCTGATCCTCCAC CAGCTGGACGAGGACCAGGC
Product: nicotinic acid mononucleotide adenylyltransferase
Products: NA
Alternate protein names: Deamido-NAD(+) diphosphorylase; Deamido-NAD(+) pyrophosphorylase; Nicotinate mononucleotide adenylyltransferase; NaMN adenylyltransferase [H]
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MIPTGLLGGSFNPAHGGHRAISLNAIDSLHLDELWWLVSPGNPLKPKAGMAPLPARLASARRMARRAPIRATGIEAELGT RYTIDTLKKLVRRYPDRQFIWIMGADNLVQLPRWRDWRGIARLMPIAVIARPGYNDRAHARRAMGWLRRFVRPADQKSHW TDWRPPALVFLRFSPDVRSATAMRQANPRWFERYEGRALRDPVTRSRLVEPTKKGRI
Sequences:
>Translated_217_residues MIPTGLLGGSFNPAHGGHRAISLNAIDSLHLDELWWLVSPGNPLKPKAGMAPLPARLASARRMARRAPIRATGIEAELGT RYTIDTLKKLVRRYPDRQFIWIMGADNLVQLPRWRDWRGIARLMPIAVIARPGYNDRAHARRAMGWLRRFVRPADQKSHW TDWRPPALVFLRFSPDVRSATAMRQANPRWFERYEGRALRDPVTRSRLVEPTKKGRI >Mature_217_residues MIPTGLLGGSFNPAHGGHRAISLNAIDSLHLDELWWLVSPGNPLKPKAGMAPLPARLASARRMARRAPIRATGIEAELGT RYTIDTLKKLVRRYPDRQFIWIMGADNLVQLPRWRDWRGIARLMPIAVIARPGYNDRAHARRAMGWLRRFVRPADQKSHW TDWRPPALVFLRFSPDVRSATAMRQANPRWFERYEGRALRDPVTRSRLVEPTKKGRI
Specific function: Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) [H]
COG id: COG1057
COG function: function code H; Nicotinic acid mononucleotide adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nadD family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004820 - InterPro: IPR005248 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2 [H]
EC number: =2.7.7.18 [H]
Molecular weight: Translated: 24921; Mature: 24921
Theoretical pI: Translated: 12.22; Mature: 12.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPTGLLGGSFNPAHGGHRAISLNAIDSLHLDELWWLVSPGNPLKPKAGMAPLPARLASA CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHH RRMARRAPIRATGIEAELGTRYTIDTLKKLVRRYPDRQFIWIMGADNLVQLPRWRDWRGI HHHHHHCCCEECCCCCCCCCEEEHHHHHHHHHHCCCCEEEEEECCCCEEECCCCCCHHHH ARLMPIAVIARPGYNDRAHARRAMGWLRRFVRPADQKSHWTDWRPPALVFLRFSPDVRSA HHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCHHHH TAMRQANPRWFERYEGRALRDPVTRSRLVEPTKKGRI HHHHHCCCHHHHHHCCCCCCCHHHHHHHCCCHHCCCC >Mature Secondary Structure MIPTGLLGGSFNPAHGGHRAISLNAIDSLHLDELWWLVSPGNPLKPKAGMAPLPARLASA CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHH RRMARRAPIRATGIEAELGTRYTIDTLKKLVRRYPDRQFIWIMGADNLVQLPRWRDWRGI HHHHHHCCCEECCCCCCCCCEEEHHHHHHHHHHCCCCEEEEEECCCCEEECCCCCCHHHH ARLMPIAVIARPGYNDRAHARRAMGWLRRFVRPADQKSHWTDWRPPALVFLRFSPDVRSA HHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCHHHH TAMRQANPRWFERYEGRALRDPVTRSRLVEPTKKGRI HHHHHCCCHHHHHHCCCCCCCHHHHHHHCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA