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The map label for this gene is ybeB [H]

Identifier: 103486070

GI number: 103486070

Start: 588818

End: 589216

Strand: Reverse

Name: ybeB [H]

Synonym: Sala_0577

Alternate gene names: 103486070

Gene position: 589216-588818 (Counterclockwise)

Preceding gene: 103486071

Following gene: 103486069

Centisome position: 17.61

GC content: 66.67

Gene sequence:

>399_bases
TTGATCTCCGCCACCCAGGGGGCCGCGCCGGGCGCCGCTCCTGCCAATGACAGCGTGGACGCGCTCCACGCGCTGATCCT
CCACCAGCTGGACGAGGACCAGGCCCAGGAAACCATCTCGATCCCGCTTGCCGGCAAGAGCAGCATCGCCGACCATATGG
TGATCGCGAGCGGCCGTTCGACGCGCCACGTCTCGGCGATTGCCGAAAAACTGGCGCAGCGGATCAAGCAGGAAGCGGGC
CGTCCGGTTCGCGTCGAAGGGCTGCCCAACGCCGATTGGGTGCTGCTCGATGCGGGCGACGTCATCGTCCACCTGTTCCG
TCCCGAGGTTCGCAGCTTCTATAACCTCGAACGCATGTGGTCGTTCGGCGACGCGCCGCCGGTCGCAGCCGCGAATTGA

Upstream 100 bases:

>100_bases
GGCAGGCCAACCCCCGCTGGTTCGAACGCTATGAAGGCCGCGCGCTGCGCGATCCGGTCACACGTTCGCGGCTGGTGGAA
CCGACCAAGAAAGGACGCAT

Downstream 100 bases:

>100_bases
CGTTTTTGATCTGTTCGGCCTAAAGCCCGACAGAAGCGGCACCAGCCCGCTCCCCCTCCCGGCCTCCCCAACGATAATAG
CCTATGGGAGGCCGGGAGGG

Product: Iojap-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MISATQGAAPGAAPANDSVDALHALILHQLDEDQAQETISIPLAGKSSIADHMVIASGRSTRHVSAIAEKLAQRIKQEAG
RPVRVEGLPNADWVLLDAGDVIVHLFRPEVRSFYNLERMWSFGDAPPVAAAN

Sequences:

>Translated_132_residues
MISATQGAAPGAAPANDSVDALHALILHQLDEDQAQETISIPLAGKSSIADHMVIASGRSTRHVSAIAEKLAQRIKQEAG
RPVRVEGLPNADWVLLDAGDVIVHLFRPEVRSFYNLERMWSFGDAPPVAAAN
>Mature_132_residues
MISATQGAAPGAAPANDSVDALHALILHQLDEDQAQETISIPLAGKSSIADHMVIASGRSTRHVSAIAEKLAQRIKQEAG
RPVRVEGLPNADWVLLDAGDVIVHLFRPEVRSFYNLERMWSFGDAPPVAAAN

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Homo sapiens, GI19923977, Length=101, Percent_Identity=31.6831683168317, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI87081768, Length=101, Percent_Identity=41.5841584158416, Blast_Score=95, Evalue=1e-21,
Organism=Drosophila melanogaster, GI19923046, Length=80, Percent_Identity=37.5, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 14099; Mature: 14099

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISATQGAAPGAAPANDSVDALHALILHQLDEDQAQETISIPLAGKSSIADHMVIASGRS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHEEECCCCCCCCHHHHEEEECCCC
TRHVSAIAEKLAQRIKQEAGRPVRVEGLPNADWVLLDAGDVIVHLFRPEVRSFYNLERMW
CHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEECCCEEEEHHCHHHHHHHHHHHHH
SFGDAPPVAAAN
CCCCCCCCCCCC
>Mature Secondary Structure
MISATQGAAPGAAPANDSVDALHALILHQLDEDQAQETISIPLAGKSSIADHMVIASGRS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHEEECCCCCCCCHHHHEEEECCCC
TRHVSAIAEKLAQRIKQEAGRPVRVEGLPNADWVLLDAGDVIVHLFRPEVRSFYNLERMW
CHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEECCCEEEEHHCHHHHHHHHHHHHH
SFGDAPPVAAAN
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]