| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486066
Identifier: 103486066
GI number: 103486066
Start: 584830
End: 585312
Strand: Reverse
Name: 103486066
Synonym: Sala_0573
Alternate gene names: NA
Gene position: 585312-584830 (Counterclockwise)
Preceding gene: 103486067
Following gene: 103486065
Centisome position: 17.5
GC content: 68.32
Gene sequence:
>483_bases ATGCTGACATCGCGCCTGGCCGCTCCCCTCGTCGCGCTGGCGGCGCCGTTGTTCCTCTATGGCGGCGCGCTGGTGTCGCA ATTCGGCTTTGGCCTTCACCCTTGCGAAATGTGTTATTGGCAGCGCTGGCCGCATCAGGCGGCGATCCTGCTCGCGCTGC TCGCGCTGCTGCTGCACCGCAATGCCGGGGCCATGCGCGCGCTCACCCTGCTCGCCGCCGCCGCCATTGCCGTCAGCGGC ACGATCGGGGTGTTCCACGCCGGGGTGGAATATGGCTTCTGGGAAGGCATCACCACCTGCGCGACCGGCACCGGCGGGCC GGTGACGCTCGAATCGATCATGGACGCGCCGCTCGTCCGCTGCGACGCGGTGCAATGGTCCTTGTTCGGCATCTCGCTGG CGGGCTTTAACGCGATCTTCTCGTTCGGCGCCGCCACGCTCGTCTTGACCTTGCTGCGCGCCGGGCGCACATCGGCGGCA TGA
Upstream 100 bases:
>100_bases GCGCCGCAACTGACGCCATGCTTCCCGCCCCGTCATCCCGGCGCAGGCCGGGATCTCGACCTTGCAACCTGACGCACCGG CGGGATTCCGAGGTTCCACC
Downstream 100 bases:
>100_bases CCGATAAGCGCACCGCATCGATGATCCGCGTCGACCAGGCGGGCGAATTTGGCGCGACGCGCATCTATGCCGGCCAGCTC GCCGTGATGGGCGACCGGCA
Product: disulfide bond formation protein
Products: NA
Alternate protein names: Disulfide Bond Formation Protein; Disulfide Bond Formation Protein DsbB; Disulfide Bond Formation Protein DsbB Family; Disulphide Bond Formation Protein; Disulfide Bond Formation Protein DsbB-Like Protein; DsbB Family Disulfide Bond Formation Protein
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MLTSRLAAPLVALAAPLFLYGGALVSQFGFGLHPCEMCYWQRWPHQAAILLALLALLLHRNAGAMRALTLLAAAAIAVSG TIGVFHAGVEYGFWEGITTCATGTGGPVTLESIMDAPLVRCDAVQWSLFGISLAGFNAIFSFGAATLVLTLLRAGRTSAA
Sequences:
>Translated_160_residues MLTSRLAAPLVALAAPLFLYGGALVSQFGFGLHPCEMCYWQRWPHQAAILLALLALLLHRNAGAMRALTLLAAAAIAVSG TIGVFHAGVEYGFWEGITTCATGTGGPVTLESIMDAPLVRCDAVQWSLFGISLAGFNAIFSFGAATLVLTLLRAGRTSAA >Mature_160_residues MLTSRLAAPLVALAAPLFLYGGALVSQFGFGLHPCEMCYWQRWPHQAAILLALLALLLHRNAGAMRALTLLAAAAIAVSG TIGVFHAGVEYGFWEGITTCATGTGGPVTLESIMDAPLVRCDAVQWSLFGISLAGFNAIFSFGAATLVLTLLRAGRTSAA
Specific function: Unknown
COG id: COG1495
COG function: function code O; Disulfide bond formation protein DsbB
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16693; Mature: 16693
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTSRLAAPLVALAAPLFLYGGALVSQFGFGLHPCEMCYWQRWPHQAAILLALLALLLHR CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHC NAGAMRALTLLAAAAIAVSGTIGVFHAGVEYGFWEGITTCATGTGGPVTLESIMDAPLVR CCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCHHHHCCCCCCCEEHHHHHCCCHHH CDAVQWSLFGISLAGFNAIFSFGAATLVLTLLRAGRTSAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLTSRLAAPLVALAAPLFLYGGALVSQFGFGLHPCEMCYWQRWPHQAAILLALLALLLHR CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHC NAGAMRALTLLAAAAIAVSGTIGVFHAGVEYGFWEGITTCATGTGGPVTLESIMDAPLVR CCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCHHHHCCCCCCCEEHHHHHCCCHHH CDAVQWSLFGISLAGFNAIFSFGAATLVLTLLRAGRTSAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA