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The map label for this gene is ctpA [H]

Identifier: 103486067

GI number: 103486067

Start: 585400

End: 586788

Strand: Reverse

Name: ctpA [H]

Synonym: Sala_0574

Alternate gene names: 103486067

Gene position: 586788-585400 (Counterclockwise)

Preceding gene: 103486068

Following gene: 103486066

Centisome position: 17.54

GC content: 65.95

Gene sequence:

>1389_bases
ATGACCGACACGACCAAAACCACCGCGTCCCCGAAACGCCGCTTCGCGCTGTGGCAGGGCGCCGCCGCGCTTTCGACGCT
GGCGCTGGTTCCGCTCGCGACCGGCGCAATGGCCACCGTCGATTCGAAGACGCAGGAAGAAATCGCGCGCTTCATGGACG
TCTATCTGGAAGTGAAGTCCAACTATGTCGAACCGGTCGAGGATGCCAAGCTGATCGAGGGCGCGATCAACGGGATGCTC
GCCAGCCTCGACCCGCATTCGGGCTATCTCGACGCACGCGGATTTTCGAACCTGCGCACCCAGACCGATGGCGAATATGG
CGGGCTGGGCCTGTCGGTGACGATGGAAGACGGCGTGGTCAAGGTGATCGCGCCGACCGCCGACACGCCCGCCGCGCGCG
CCGGGATCAAGGCGGGCGATTTCATCACTCACATCAACGACGAGCTGATCTTCGGGCTGACGCTCGACGAGGCGGTCGAA
CAGATGCGCGGACGGCCGGGGACGCCGATCGACATCACGATCGTGCGCGAAGGCCAGGACAAGCCGATCGAGATGACGCT
GACGCGCGAGATCATCGACCTCAAACCCGTGAAATGGGAGGTCAGGGGCGATGTCGGCGTGCTCACCGTCACCAGCTTCT
CGGCCGACGCGACCACCGACCTCAAGGCCGCGATGATGGCGGTCGAAAAATCGCTCGGCAAAAAACCGCGCGGCTGGGTG
CTCGACCTCCGCTCGAACCCCGGCGGGCTGCTCGACGAAGCTGTCGGGATCAGCGACCTGTTCCTCGAACGCGGCGAGAT
CGTGTCGCAGCGCGGACGCCGCAAGGGCGACATCGAACGCTATTTCGCCGAACCGGGCGATCTGGCCGCCGGCGCGCCGG
TGATCGTGCTGATCGACGCCGGCTCGGCCTCGGCATCCGAAATCGTTGCCGGCGCGCTGCAGGACCAGCATCGCGCGGTC
GTCATGGGCGAACGCAGCTTCGGCAAGGGGTCGGTGCAGACGGTGCTCCCGCTCAGCGACACCACCGCGCTGCGGCTGAC
CACCGCGCGCTATTACACGCCGTCGGGGCGCAGCGTGCAGGAAGGCGGGATCGAACCCGACATCAAGGTGCCGCAGCTCA
GCGACCCCGATTATGCGTCGCGCCCCAAGTTCCGCGAAAGCGACCTGCGCCGTCACCTGATCAACGAGAAAAAGGTCGAC
AACGGCCTCATTGAAAAGGATGAAACGCCCGACCCGCGCTTCACCGCGACCGCTGACGAGCTGAAGGCCAAGGGGATCGA
GGATTTCCAGTTGCACTATGCGTTGCAGACGATAGGCCGGATCGGCCCTGGAACGCCGCGCATGGCCGCGGCGGCCAAGC
CGGCCGCGAAGCCGGCGCGCCGCAACTGA

Upstream 100 bases:

>100_bases
CCGGATCGAGACCCCCGCTTGACCCACGCAGATTTGCATAGGATGATGGAGCACCGGGGTTTATAGCGCGGCATGGCTCT
CGCCCGAGTGAAAGACTGAT

Downstream 100 bases:

>100_bases
CGCCATGCTTCCCGCCCCGTCATCCCGGCGCAGGCCGGGATCTCGACCTTGCAACCTGACGCACCGGCGGGATTCCGAGG
TTCCACCATGCTGACATCGC

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 462; Mature: 461

Protein sequence:

>462_residues
MTDTTKTTASPKRRFALWQGAAALSTLALVPLATGAMATVDSKTQEEIARFMDVYLEVKSNYVEPVEDAKLIEGAINGML
ASLDPHSGYLDARGFSNLRTQTDGEYGGLGLSVTMEDGVVKVIAPTADTPAARAGIKAGDFITHINDELIFGLTLDEAVE
QMRGRPGTPIDITIVREGQDKPIEMTLTREIIDLKPVKWEVRGDVGVLTVTSFSADATTDLKAAMMAVEKSLGKKPRGWV
LDLRSNPGGLLDEAVGISDLFLERGEIVSQRGRRKGDIERYFAEPGDLAAGAPVIVLIDAGSASASEIVAGALQDQHRAV
VMGERSFGKGSVQTVLPLSDTTALRLTTARYYTPSGRSVQEGGIEPDIKVPQLSDPDYASRPKFRESDLRRHLINEKKVD
NGLIEKDETPDPRFTATADELKAKGIEDFQLHYALQTIGRIGPGTPRMAAAAKPAAKPARRN

Sequences:

>Translated_462_residues
MTDTTKTTASPKRRFALWQGAAALSTLALVPLATGAMATVDSKTQEEIARFMDVYLEVKSNYVEPVEDAKLIEGAINGML
ASLDPHSGYLDARGFSNLRTQTDGEYGGLGLSVTMEDGVVKVIAPTADTPAARAGIKAGDFITHINDELIFGLTLDEAVE
QMRGRPGTPIDITIVREGQDKPIEMTLTREIIDLKPVKWEVRGDVGVLTVTSFSADATTDLKAAMMAVEKSLGKKPRGWV
LDLRSNPGGLLDEAVGISDLFLERGEIVSQRGRRKGDIERYFAEPGDLAAGAPVIVLIDAGSASASEIVAGALQDQHRAV
VMGERSFGKGSVQTVLPLSDTTALRLTTARYYTPSGRSVQEGGIEPDIKVPQLSDPDYASRPKFRESDLRRHLINEKKVD
NGLIEKDETPDPRFTATADELKAKGIEDFQLHYALQTIGRIGPGTPRMAAAAKPAAKPARRN
>Mature_461_residues
TDTTKTTASPKRRFALWQGAAALSTLALVPLATGAMATVDSKTQEEIARFMDVYLEVKSNYVEPVEDAKLIEGAINGMLA
SLDPHSGYLDARGFSNLRTQTDGEYGGLGLSVTMEDGVVKVIAPTADTPAARAGIKAGDFITHINDELIFGLTLDEAVEQ
MRGRPGTPIDITIVREGQDKPIEMTLTREIIDLKPVKWEVRGDVGVLTVTSFSADATTDLKAAMMAVEKSLGKKPRGWVL
DLRSNPGGLLDEAVGISDLFLERGEIVSQRGRRKGDIERYFAEPGDLAAGAPVIVLIDAGSASASEIVAGALQDQHRAVV
MGERSFGKGSVQTVLPLSDTTALRLTTARYYTPSGRSVQEGGIEPDIKVPQLSDPDYASRPKFRESDLRRHLINEKKVDN
GLIEKDETPDPRFTATADELKAKGIEDFQLHYALQTIGRIGPGTPRMAAAAKPAAKPARRN

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=381, Percent_Identity=30.1837270341207, Blast_Score=139, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 49782; Mature: 49651

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTTKTTASPKRRFALWQGAAALSTLALVPLATGAMATVDSKTQEEIARFMDVYLEVKS
CCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHH
NYVEPVEDAKLIEGAINGMLASLDPHSGYLDARGFSNLRTQTDGEYGGLGLSVTMEDGVV
CCCCCCHHHHHHHHHHHCEEEECCCCCCEECCCCCCCCCCCCCCCCCCEEEEEEECCCEE
KVIAPTADTPAARAGIKAGDFITHINDELIFGLTLDEAVEQMRGRPGTPIDITIVREGQD
EEEECCCCCCHHHCCCCCCCHHEECCCCEEEEEEHHHHHHHHCCCCCCCEEEEEEECCCC
KPIEMTLTREIIDLKPVKWEVRGDVGVLTVTSFSADATTDLKAAMMAVEKSLGKKPRGWV
CCEEEEEEHHHHHCCCCEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEE
LDLRSNPGGLLDEAVGISDLFLERGEIVSQRGRRKGDIERYFAEPGDLAAGAPVIVLIDA
EEECCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCEEEEEEC
GSASASEIVAGALQDQHRAVVMGERSFGKGSVQTVLPLSDTTALRLTTARYYTPSGRSVQ
CCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEECCCCCEEEEEEEEEECCCCCCHH
EGGIEPDIKVPQLSDPDYASRPKFRESDLRRHLINEKKVDNGLIEKDETPDPRFTATADE
HCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCHHH
LKAKGIEDFQLHYALQTIGRIGPGTPRMAAAAKPAAKPARRN
HHHCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TDTTKTTASPKRRFALWQGAAALSTLALVPLATGAMATVDSKTQEEIARFMDVYLEVKS
CCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHH
NYVEPVEDAKLIEGAINGMLASLDPHSGYLDARGFSNLRTQTDGEYGGLGLSVTMEDGVV
CCCCCCHHHHHHHHHHHCEEEECCCCCCEECCCCCCCCCCCCCCCCCCEEEEEEECCCEE
KVIAPTADTPAARAGIKAGDFITHINDELIFGLTLDEAVEQMRGRPGTPIDITIVREGQD
EEEECCCCCCHHHCCCCCCCHHEECCCCEEEEEEHHHHHHHHCCCCCCCEEEEEEECCCC
KPIEMTLTREIIDLKPVKWEVRGDVGVLTVTSFSADATTDLKAAMMAVEKSLGKKPRGWV
CCEEEEEEHHHHHCCCCEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEE
LDLRSNPGGLLDEAVGISDLFLERGEIVSQRGRRKGDIERYFAEPGDLAAGAPVIVLIDA
EEECCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCEEEEEEC
GSASASEIVAGALQDQHRAVVMGERSFGKGSVQTVLPLSDTTALRLTTARYYTPSGRSVQ
CCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEECCCCCEEEEEEEEEECCCCCCHH
EGGIEPDIKVPQLSDPDYASRPKFRESDLRRHLINEKKVDNGLIEKDETPDPRFTATADE
HCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCHHH
LKAKGIEDFQLHYALQTIGRIGPGTPRMAAAAKPAAKPARRN
HHHCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]