| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is suhB [H]
Identifier: 103486061
GI number: 103486061
Start: 580804
End: 581595
Strand: Reverse
Name: suhB [H]
Synonym: Sala_0568
Alternate gene names: 103486061
Gene position: 581595-580804 (Counterclockwise)
Preceding gene: 103486062
Following gene: 103486060
Centisome position: 17.39
GC content: 70.58
Gene sequence:
>792_bases GTGCCCGGCCGCAACCTCGAAGCGGTGATCGCCGCGACGCGCGAGGTCGGCGACATGGCGATGGCGCGCTGGCGCGGCGA AGGCAAGGCGGTCGATGTCTGGCACAAGTCGCACGACAATCCGGTCAGTGACGTCGACCTCGCGGTCGATGCCCGGCTGA AGGCCGTGCTCGGCGCGATGGTGCCCGAGGCCGGCTGGTTGTCCGAAGAAACCGCCGACAATGAGGATCGCCTCGCATGC CGCGCCATGTGGTGCGTCGATCCGATCGACGGCACGCGCGATTTCATCCGCGGCCGCCCCGGCTGGTGCGTTTCGGTCGC GCTGATCGTCGACGGCCAGCCCGAACTGGGCGTGCTCTATGCCCCCGCGCTCGACGAATTATGGGTCGCGCAAAGCGGCA AGGGCGCGACACTGAACGGCGAAACGCTGCGCGCCAGCCGCCGCATGATCTTCGACGGCGCGCGCGTGCCCGCCGACAGC CTGCCGCGGATCGACCGCGACCTCATCATGGTGACGAAGCCGAACAGCATCGCGCTGCGCATGGCGCTCGTCGCCGACGA CCGCGCCGACCTGGTCGCGACGCTGCGCTGGGGCTTTGAATGGGACGTCGCCGCCGCCGCCCTGATCGCGACCGAGGCAG GCGCGGCGGTGAGCGACGCCTTTGGAAAACCCCTCGTCTTCAACACCCCACGCGCACAGGCGTTCGGCGTCATCGCCTGC GCGCCCGGCATCCACCGCGCCGTCGTCGCGCGCCTGCACGACCGCGCGGTCGCGCTGACAGCCGAAGGCTGA
Upstream 100 bases:
>100_bases GCGGCGCTGATCCCCGCCGACGACCTTATATTCCGCCATGCCACCAACGCCCCGACGCTGCGCATCGACGGCATGACCGT CGCGTCGAGCTGAGACCGTC
Downstream 100 bases:
>100_bases CCGGACCGGCACCGGAAACGGATGAAAAAGAGCGCCCCGGCCGCCAAGCCGCCGCGCTTTGCTTGACAATCGGTGCGACT CAGCCTAGTTGCCCTTCCAT
Product: inositol monophosphatase
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MPGRNLEAVIAATREVGDMAMARWRGEGKAVDVWHKSHDNPVSDVDLAVDARLKAVLGAMVPEAGWLSEETADNEDRLAC RAMWCVDPIDGTRDFIRGRPGWCVSVALIVDGQPELGVLYAPALDELWVAQSGKGATLNGETLRASRRMIFDGARVPADS LPRIDRDLIMVTKPNSIALRMALVADDRADLVATLRWGFEWDVAAAALIATEAGAAVSDAFGKPLVFNTPRAQAFGVIAC APGIHRAVVARLHDRAVALTAEG
Sequences:
>Translated_263_residues MPGRNLEAVIAATREVGDMAMARWRGEGKAVDVWHKSHDNPVSDVDLAVDARLKAVLGAMVPEAGWLSEETADNEDRLAC RAMWCVDPIDGTRDFIRGRPGWCVSVALIVDGQPELGVLYAPALDELWVAQSGKGATLNGETLRASRRMIFDGARVPADS LPRIDRDLIMVTKPNSIALRMALVADDRADLVATLRWGFEWDVAAAALIATEAGAAVSDAFGKPLVFNTPRAQAFGVIAC APGIHRAVVARLHDRAVALTAEG >Mature_262_residues PGRNLEAVIAATREVGDMAMARWRGEGKAVDVWHKSHDNPVSDVDLAVDARLKAVLGAMVPEAGWLSEETADNEDRLACR AMWCVDPIDGTRDFIRGRPGWCVSVALIVDGQPELGVLYAPALDELWVAQSGKGATLNGETLRASRRMIFDGARVPADSL PRIDRDLIMVTKPNSIALRMALVADDRADLVATLRWGFEWDVAAAALIATEAGAAVSDAFGKPLVFNTPRAQAFGVIACA PGIHRAVVARLHDRAVALTAEG
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI7657236, Length=203, Percent_Identity=29.5566502463054, Blast_Score=75, Evalue=6e-14, Organism=Escherichia coli, GI1788882, Length=265, Percent_Identity=29.0566037735849, Blast_Score=95, Evalue=6e-21, Organism=Escherichia coli, GI1790659, Length=234, Percent_Identity=32.9059829059829, Blast_Score=82, Evalue=3e-17, Organism=Caenorhabditis elegans, GI193202572, Length=209, Percent_Identity=30.1435406698565, Blast_Score=84, Evalue=7e-17, Organism=Caenorhabditis elegans, GI193202570, Length=213, Percent_Identity=29.5774647887324, Blast_Score=83, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6320493, Length=119, Percent_Identity=35.2941176470588, Blast_Score=75, Evalue=1e-14, Organism=Drosophila melanogaster, GI21357303, Length=240, Percent_Identity=30, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI21357329, Length=218, Percent_Identity=31.1926605504587, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI24664918, Length=232, Percent_Identity=27.5862068965517, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI24664922, Length=233, Percent_Identity=29.6137339055794, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24664926, Length=201, Percent_Identity=29.8507462686567, Blast_Score=77, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 28200; Mature: 28068
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGRNLEAVIAATREVGDMAMARWRGEGKAVDVWHKSHDNPVSDVDLAVDARLKAVLGAM CCCCCCHHEEHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH VPEAGWLSEETADNEDRLACRAMWCVDPIDGTRDFIRGRPGWCVSVALIVDGQPELGVLY CCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHCCCCCCEEEEEEEECCCCCCEEEE APALDELWVAQSGKGATLNGETLRASRRMIFDGARVPADSLPRIDRDLIMVTKPNSIALR CCCCHHHHHCCCCCCCEECCHHHHHCCCEEECCCCCCCCCCCCCCCCEEEEECCCCEEEE MALVADDRADLVATLRWGFEWDVAAAALIATEAGAAVSDAFGKPLVFNTPRAQAFGVIAC EEEEECCCHHEEEEEECCCCCHHHHHHHHHHCCCCHHHHHCCCCEEEECCCHHHEEEEEE APGIHRAVVARLHDRAVALTAEG CCCHHHHHHHHHCCCEEEEEECC >Mature Secondary Structure PGRNLEAVIAATREVGDMAMARWRGEGKAVDVWHKSHDNPVSDVDLAVDARLKAVLGAM CCCCCHHEEHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH VPEAGWLSEETADNEDRLACRAMWCVDPIDGTRDFIRGRPGWCVSVALIVDGQPELGVLY CCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHCCCCCCEEEEEEEECCCCCCEEEE APALDELWVAQSGKGATLNGETLRASRRMIFDGARVPADSLPRIDRDLIMVTKPNSIALR CCCCHHHHHCCCCCCCEECCHHHHHCCCEEECCCCCCCCCCCCCCCCEEEEECCCCEEEE MALVADDRADLVATLRWGFEWDVAAAALIATEAGAAVSDAFGKPLVFNTPRAQAFGVIAC EEEEECCCHHEEEEEECCCCCHHHHHHHHHHCCCCHHHHHCCCCEEEECCCHHHEEEEEE APGIHRAVVARLHDRAVALTAEG CCCHHHHHHHHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]