The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485935

Identifier: 103485935

GI number: 103485935

Start: 452936

End: 453865

Strand: Reverse

Name: 103485935

Synonym: Sala_0442

Alternate gene names: NA

Gene position: 453865-452936 (Counterclockwise)

Preceding gene: 103485937

Following gene: 103485934

Centisome position: 13.57

GC content: 61.72

Gene sequence:

>930_bases
ATGCCCCCGTTAGACAAAGCTCATCAACTCGAACGCCGAGCCCGCACTATCGTTGAAAGCCTTCAGGGTACATGGAGTCG
GGGCAAAGGCATGTGCTGCTGCCCCGCGCACGACGATCGAACTCCGTCGCTGAGTGTGACCTTGGGGCGCAAAGCCATCC
TGTTTCACTGCTTCGCGGGATGCCTGAATGAGGACGTCATTGCGGCGCTGGATCGCCAAGGCGTTCGCAGCCGCGACCTT
TTCAACGCTTCAGACGCTGAGACCATCGAAAAGCATAGATATCGCGACTTCAGTCCCAATGCGCGGCGCTTGTGGCAATC
GGCGACGGCGAGCTCCGACAGCCCTGCCGTACAATACCTTGCGCAGCGCGGTCTTCTGCGCGGATCCGATCAACTCCGCT
ACCTAGCGCGCACGCCGCTCGGGCCGCGCGGCGCTGTCCAATTTCTCCCCGCGATGCTGGCCGCAGTAACAACCGACATT
GGCATAATCGCGGTACACCGAACGTTTCTCGACTTGGCGAGCGGCAAGCTTGCCGCTTTCGAGCGGCCCAAGCGTGCGCT
TGGCACCCTTGGCTGTGGCGCCGTCAGACTGGTGCCGCCGGTGCAAGGGCGTCTTGGACTTGCCGAAGGTATCGAGAGCG
CCCTGTCAGCCATGCAGCTGTTCGGAGTCCCGTGCTGGGCAACGCTCGGGAATGAGCGCTTCGGTCTCGTTTCCATTCCG
GAGAGTGTCCGCGAGCTTTTCCTGTTTATCGACAATGATGCCGGAGGCGCTCTCGCCGAGAAGAGAGCGCTGAAGGCTTA
CGCTGCACCTAGTCGTGTCATCCACTCACGAGTTCCGGCCTCGCCCGGTTTTGACTGGAACGATGAGCTGAAGTCCCGGC
TTGCCCGTAAACCTGACCCGTTGGGCAGAGGGGAGGGGGCCTTCGGCTGA

Upstream 100 bases:

>100_bases
CGAGTGGGAACATATAAAGAACAACCGACGTAGGAAATTGGTTTGGCGCAAGTGCAGAGCGGAGGCTGCGCGGGGAGGGC
ACCTCAACCGGAGTAGGTCG

Downstream 100 bases:

>100_bases
TTGAGGCCTGCCCGGCGCAGGACCTCGTCAGGAGGTTCCCATGTCCAATTCTTCCCTCGCTTTTGCATTCGATGAACCAT
CACCGCCCGCTGTTGCGACG

Product: virulence-associated protein E

Products: NA

Alternate protein names: Genomic Island Protein

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MPPLDKAHQLERRARTIVESLQGTWSRGKGMCCCPAHDDRTPSLSVTLGRKAILFHCFAGCLNEDVIAALDRQGVRSRDL
FNASDAETIEKHRYRDFSPNARRLWQSATASSDSPAVQYLAQRGLLRGSDQLRYLARTPLGPRGAVQFLPAMLAAVTTDI
GIIAVHRTFLDLASGKLAAFERPKRALGTLGCGAVRLVPPVQGRLGLAEGIESALSAMQLFGVPCWATLGNERFGLVSIP
ESVRELFLFIDNDAGGALAEKRALKAYAAPSRVIHSRVPASPGFDWNDELKSRLARKPDPLGRGEGAFG

Sequences:

>Translated_309_residues
MPPLDKAHQLERRARTIVESLQGTWSRGKGMCCCPAHDDRTPSLSVTLGRKAILFHCFAGCLNEDVIAALDRQGVRSRDL
FNASDAETIEKHRYRDFSPNARRLWQSATASSDSPAVQYLAQRGLLRGSDQLRYLARTPLGPRGAVQFLPAMLAAVTTDI
GIIAVHRTFLDLASGKLAAFERPKRALGTLGCGAVRLVPPVQGRLGLAEGIESALSAMQLFGVPCWATLGNERFGLVSIP
ESVRELFLFIDNDAGGALAEKRALKAYAAPSRVIHSRVPASPGFDWNDELKSRLARKPDPLGRGEGAFG
>Mature_308_residues
PPLDKAHQLERRARTIVESLQGTWSRGKGMCCCPAHDDRTPSLSVTLGRKAILFHCFAGCLNEDVIAALDRQGVRSRDLF
NASDAETIEKHRYRDFSPNARRLWQSATASSDSPAVQYLAQRGLLRGSDQLRYLARTPLGPRGAVQFLPAMLAAVTTDIG
IIAVHRTFLDLASGKLAAFERPKRALGTLGCGAVRLVPPVQGRLGLAEGIESALSAMQLFGVPCWATLGNERFGLVSIPE
SVRELFLFIDNDAGGALAEKRALKAYAAPSRVIHSRVPASPGFDWNDELKSRLARKPDPLGRGEGAFG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33527; Mature: 33396

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPLDKAHQLERRARTIVESLQGTWSRGKGMCCCPAHDDRTPSLSVTLGRKAILFHCFAG
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCHHHHHHHHHHH
CLNEDVIAALDRQGVRSRDLFNASDAETIEKHRYRDFSPNARRLWQSATASSDSPAVQYL
HHCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHH
AQRGLLRGSDQLRYLARTPLGPRGAVQFLPAMLAAVTTDIGIIAVHRTFLDLASGKLAAF
HHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ERPKRALGTLGCGAVRLVPPVQGRLGLAEGIESALSAMQLFGVPCWATLGNERFGLVSIP
HCHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEECC
ESVRELFLFIDNDAGGALAEKRALKAYAAPSRVIHSRVPASPGFDWNDELKSRLARKPDP
HHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCC
LGRGEGAFG
CCCCCCCCC
>Mature Secondary Structure 
PPLDKAHQLERRARTIVESLQGTWSRGKGMCCCPAHDDRTPSLSVTLGRKAILFHCFAG
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCHHHHHHHHHHH
CLNEDVIAALDRQGVRSRDLFNASDAETIEKHRYRDFSPNARRLWQSATASSDSPAVQYL
HHCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHH
AQRGLLRGSDQLRYLARTPLGPRGAVQFLPAMLAAVTTDIGIIAVHRTFLDLASGKLAAF
HHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ERPKRALGTLGCGAVRLVPPVQGRLGLAEGIESALSAMQLFGVPCWATLGNERFGLVSIP
HCHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEECC
ESVRELFLFIDNDAGGALAEKRALKAYAAPSRVIHSRVPASPGFDWNDELKSRLARKPDP
HHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCC
LGRGEGAFG
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA