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The map label for this gene is yubM [H]

Identifier: 103485921

GI number: 103485921

Start: 433473

End: 435461

Strand: Reverse

Name: yubM [H]

Synonym: Sala_0428

Alternate gene names: 103485921

Gene position: 435461-433473 (Counterclockwise)

Preceding gene: 103485925

Following gene: 103485920

Centisome position: 13.02

GC content: 65.16

Gene sequence:

>1989_bases
ATGATCAAGTCGATCCCGCTGAACAAGCTCGTCCAGTCTCCCCGCAATGTTCGCCGTCACAGTGACCCGGCATCAGACGC
CGAGCTCAAGGCAAGCATCGCAGCCTGTGGCCTGCTACAGAACCTCATCGTGAGGCCCACCGCCAAGGCCAAGTTCGAGG
TCGAAGCCGGTGAGAGGCGTCGGCGCGCAATGCTCGCGCTTGCAGACGAAAAGATCCTTGCCCGCGATCACGAAGTCACC
TGCCTCGTGCTCGAAGACAGCGCTGAGGTCGCGGTCGAGACCAGCCTTGCGGAGAACTTTCACCGCCTCGCCATGAACCC
GGCCGACGAAGCCCAGGCCTTTGCCGCGCTCGTGGCAGGCGGTGCGACCGTCGAGGACGTCGCGCGCCGCTTCGGTCTGA
CCGTTCGCTTCGTTGATGGCCGGCTGCGTCTCGCGAACCTTGCGCCTGTGGTGTTTGAGGCACTGGCCTCCGGGGAAATC
ACCCTCGATATCGCCAAGGCCTTCGGCGCGACCTCGGACCAGGACATCCAGGCCCGGGTGTTCGAGCAGGTTTCCTCGGC
CTACTACGCACCCAATCCCGACAGCATCCGGCGCATGGTCCTCTCCGGCACAGTCCGGGGCAGCGATCCGCGCGCCCGTC
TCGTTGGCCGCGATGCCTACATTGCCGCGGGCGGCCGGATCGAGCGTGAGCTGTTCGACAACGACGACAGCGAATCCTGG
GTCGATGTTGCGCTGCTCGAAAGCCTAGCGGCGGCAGAGATGGAAGAGCAGGCCAAAGCCCTCGCCACCGAGCAGGGTCT
TGCCTGGGTGAAGCCAACGCTTGATCCCTACGCCAGCCACGATCTGGTCGAAGGGCTGGTCCGGCTTCCTGCCGACCCGG
CGCCGATGACCGAAGCCGAATTGGCAAGGCTCGACGAACTCGATGCCTCCTATGACGAACATGCGGCTATCCTCGAAGAT
GAGGACAGCGCCGAGGAGGCTGTGGCAGCGGCCGAAGCGGCAATCGAGGCGATCGAACGCGAGTGTCAGGACATTCGCGC
CCGCCCGCCCGTCATCGCGCCCGAGCTCAAGGCCGAGGCAGGGATGATCCTGGTGCTCTCGCGTGATGGGACGCCGGTTC
TCCAACCGGTGTTCTACGGCGAGCGTCAGGCTGATCCCGCGGAAGCTGACGATGGGATCGAAGTCGTTGCCGGCGATGAA
GGTTCGGACAGGCGCCGGACGACTTTGTCGAAACGTCTGGTCGACGAACTCGCGATGCAGCGTCGCGATATTCTGGCACT
TCACGTTGCGTCCGATCCCGGGCTGGCGCTCGACATCATGGTCTTCACCCTCGCCGATTCCGATACCCACGATTGGCGGG
CGCGCCCTTCGACCACGCTGCGCGCGCCTGTTCCGGCAGGCCCGATCATCGGCTTCGAAGCCAAGGATGCGCCAGCGAGC
AGCGCGCTTGCCGAGCTCAGGTCCGGTCTCGACGAAAGCTGGCGCGCCGGTGCCAATGCAACGTCCCGCTTCGACCTGTT
TCGGGCGCTGTCCGATGACAGCCGCGCCGCGTGGCTGGGCCATGTCGTTGCCCGGTCGCTCGAGGCCAGCCTCAACATGG
AAGGTGAGCGTCAGCTGCCATTCCAGGATCATCTCGGCAGCCTGATCGGCATCGACATGGCGCAGTGGTGGCGTCCGACG
GCGGCCAATTACTTCGATCGGGTATCGAAGCAGGTGATCCTCGACGCGCTGACCGACGTCGGCGGTCTCGAGCTCTCCTC
CCGCTTTGCCTCGGTCAAGAAGGGTGACCTCGCGATGAGTGCCGAACGCGTCTTCGCCGGCACTTACATCACCGAGGTCG
AAGTACGCGAGAAGGCCCTGGCCTGGGTGCCTGAGGTCCTGCGGTTTGCCTCCGCTGCCCCGGAGGCTGGCGAAGCCGAG
ATCGACGCGACCGACGCTGACCCCGGTGACGATACCGAAGATCAGTCCCCCCGCGAGTTGGCCGCCTGA

Upstream 100 bases:

>100_bases
ATTCGCTGCGAACGCATGAGAGGGGAGTGGGCTTTGCCTTGATTGAGCCAGTTGGGCGTCGAAGGTCGATGCACCGGGCT
CACAATCAGGAGTGTGTCCC

Downstream 100 bases:

>100_bases
CCTCCTCCTGACAGGCTCGGTCACTCGCACCTCGAGAAGCGGTCCTTCGGCTTACGCCGGAGGGCCGCTTCCTTTTTGGA
AGGAGAGCGGAGGGGGCTCG

Product: parB-like partition proteins

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 662; Mature: 662

Protein sequence:

>662_residues
MIKSIPLNKLVQSPRNVRRHSDPASDAELKASIAACGLLQNLIVRPTAKAKFEVEAGERRRRAMLALADEKILARDHEVT
CLVLEDSAEVAVETSLAENFHRLAMNPADEAQAFAALVAGGATVEDVARRFGLTVRFVDGRLRLANLAPVVFEALASGEI
TLDIAKAFGATSDQDIQARVFEQVSSAYYAPNPDSIRRMVLSGTVRGSDPRARLVGRDAYIAAGGRIERELFDNDDSESW
VDVALLESLAAAEMEEQAKALATEQGLAWVKPTLDPYASHDLVEGLVRLPADPAPMTEAELARLDELDASYDEHAAILED
EDSAEEAVAAAEAAIEAIERECQDIRARPPVIAPELKAEAGMILVLSRDGTPVLQPVFYGERQADPAEADDGIEVVAGDE
GSDRRRTTLSKRLVDELAMQRRDILALHVASDPGLALDIMVFTLADSDTHDWRARPSTTLRAPVPAGPIIGFEAKDAPAS
SALAELRSGLDESWRAGANATSRFDLFRALSDDSRAAWLGHVVARSLEASLNMEGERQLPFQDHLGSLIGIDMAQWWRPT
AANYFDRVSKQVILDALTDVGGLELSSRFASVKKGDLAMSAERVFAGTYITEVEVREKALAWVPEVLRFASAAPEAGEAE
IDATDADPGDDTEDQSPRELAA

Sequences:

>Translated_662_residues
MIKSIPLNKLVQSPRNVRRHSDPASDAELKASIAACGLLQNLIVRPTAKAKFEVEAGERRRRAMLALADEKILARDHEVT
CLVLEDSAEVAVETSLAENFHRLAMNPADEAQAFAALVAGGATVEDVARRFGLTVRFVDGRLRLANLAPVVFEALASGEI
TLDIAKAFGATSDQDIQARVFEQVSSAYYAPNPDSIRRMVLSGTVRGSDPRARLVGRDAYIAAGGRIERELFDNDDSESW
VDVALLESLAAAEMEEQAKALATEQGLAWVKPTLDPYASHDLVEGLVRLPADPAPMTEAELARLDELDASYDEHAAILED
EDSAEEAVAAAEAAIEAIERECQDIRARPPVIAPELKAEAGMILVLSRDGTPVLQPVFYGERQADPAEADDGIEVVAGDE
GSDRRRTTLSKRLVDELAMQRRDILALHVASDPGLALDIMVFTLADSDTHDWRARPSTTLRAPVPAGPIIGFEAKDAPAS
SALAELRSGLDESWRAGANATSRFDLFRALSDDSRAAWLGHVVARSLEASLNMEGERQLPFQDHLGSLIGIDMAQWWRPT
AANYFDRVSKQVILDALTDVGGLELSSRFASVKKGDLAMSAERVFAGTYITEVEVREKALAWVPEVLRFASAAPEAGEAE
IDATDADPGDDTEDQSPRELAA
>Mature_662_residues
MIKSIPLNKLVQSPRNVRRHSDPASDAELKASIAACGLLQNLIVRPTAKAKFEVEAGERRRRAMLALADEKILARDHEVT
CLVLEDSAEVAVETSLAENFHRLAMNPADEAQAFAALVAGGATVEDVARRFGLTVRFVDGRLRLANLAPVVFEALASGEI
TLDIAKAFGATSDQDIQARVFEQVSSAYYAPNPDSIRRMVLSGTVRGSDPRARLVGRDAYIAAGGRIERELFDNDDSESW
VDVALLESLAAAEMEEQAKALATEQGLAWVKPTLDPYASHDLVEGLVRLPADPAPMTEAELARLDELDASYDEHAAILED
EDSAEEAVAAAEAAIEAIERECQDIRARPPVIAPELKAEAGMILVLSRDGTPVLQPVFYGERQADPAEADDGIEVVAGDE
GSDRRRTTLSKRLVDELAMQRRDILALHVASDPGLALDIMVFTLADSDTHDWRARPSTTLRAPVPAGPIIGFEAKDAPAS
SALAELRSGLDESWRAGANATSRFDLFRALSDDSRAAWLGHVVARSLEASLNMEGERQLPFQDHLGSLIGIDMAQWWRPT
AANYFDRVSKQVILDALTDVGGLELSSRFASVKKGDLAMSAERVFAGTYITEVEVREKALAWVPEVLRFASAAPEAGEAE
IDATDADPGDDTEDQSPRELAA

Specific function: Unknown

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 71615; Mature: 71615

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKSIPLNKLVQSPRNVRRHSDPASDAELKASIAACGLLQNLIVRPTAKAKFEVEAGERR
CCCCCCHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHH
RRAMLALADEKILARDHEVTCLVLEDSAEVAVETSLAENFHRLAMNPADEAQAFAALVAG
HHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
GATVEDVARRFGLTVRFVDGRLRLANLAPVVFEALASGEITLDIAKAFGATSDQDIQARV
CCCHHHHHHHHCCEEEEECCEEEEHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCHHHHHH
FEQVSSAYYAPNPDSIRRMVLSGTVRGSDPRARLVGRDAYIAAGGRIERELFDNDDSESW
HHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCEEEECCCCEEHHHCCCCCCCHH
VDVALLESLAAAEMEEQAKALATEQGLAWVKPTLDPYASHDLVEGLVRLPADPAPMTEAE
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCCCHHH
LARLDELDASYDEHAAILEDEDSAEEAVAAAEAAIEAIERECQDIRARPPVIAPELKAEA
HHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
GMILVLSRDGTPVLQPVFYGERQADPAEADDGIEVVAGDEGSDRRRTTLSKRLVDELAMQ
CEEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHH
RRDILALHVASDPGLALDIMVFTLADSDTHDWRARPSTTLRAPVPAGPIIGFEAKDAPAS
HCCEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCEEECCCCCCCEEECCCCCCCHH
SALAELRSGLDESWRAGANATSRFDLFRALSDDSRAAWLGHVVARSLEASLNMEGERQLP
HHHHHHHHCCCHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
FQDHLGSLIGIDMAQWWRPTAANYFDRVSKQVILDALTDVGGLELSSRFASVKKGDLAMS
HHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHH
AERVFAGTYITEVEVREKALAWVPEVLRFASAAPEAGEAEIDATDADPGDDTEDQSPREL
HHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCHHH
AA
CC
>Mature Secondary Structure
MIKSIPLNKLVQSPRNVRRHSDPASDAELKASIAACGLLQNLIVRPTAKAKFEVEAGERR
CCCCCCHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHH
RRAMLALADEKILARDHEVTCLVLEDSAEVAVETSLAENFHRLAMNPADEAQAFAALVAG
HHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
GATVEDVARRFGLTVRFVDGRLRLANLAPVVFEALASGEITLDIAKAFGATSDQDIQARV
CCCHHHHHHHHCCEEEEECCEEEEHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCHHHHHH
FEQVSSAYYAPNPDSIRRMVLSGTVRGSDPRARLVGRDAYIAAGGRIERELFDNDDSESW
HHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCEEEECCCCEEHHHCCCCCCCHH
VDVALLESLAAAEMEEQAKALATEQGLAWVKPTLDPYASHDLVEGLVRLPADPAPMTEAE
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCCCHHH
LARLDELDASYDEHAAILEDEDSAEEAVAAAEAAIEAIERECQDIRARPPVIAPELKAEA
HHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
GMILVLSRDGTPVLQPVFYGERQADPAEADDGIEVVAGDEGSDRRRTTLSKRLVDELAMQ
CEEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHH
RRDILALHVASDPGLALDIMVFTLADSDTHDWRARPSTTLRAPVPAGPIIGFEAKDAPAS
HCCEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCEEECCCCCCCEEECCCCCCCHH
SALAELRSGLDESWRAGANATSRFDLFRALSDDSRAAWLGHVVARSLEASLNMEGERQLP
HHHHHHHHCCCHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
FQDHLGSLIGIDMAQWWRPTAANYFDRVSKQVILDALTDVGGLELSSRFASVKKGDLAMS
HHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHH
AERVFAGTYITEVEVREKALAWVPEVLRFASAAPEAGEAEIDATDADPGDDTEDQSPREL
HHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCHHH
AA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9722640; 9628576 [H]