Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485920

Identifier: 103485920

GI number: 103485920

Start: 432364

End: 433305

Strand: Reverse

Name: 103485920

Synonym: Sala_0427

Alternate gene names: NA

Gene position: 433305-432364 (Counterclockwise)

Preceding gene: 103485921

Following gene: 103485919

Centisome position: 12.95

GC content: 64.12

Gene sequence:

>942_bases
ATGGCCTATCGCAAGGGACAGAGCGGCGGCTTGTCGCCCGCCACCCGCATCACCCAGGAAATCATCGCCCGTCTGGAAGC
AGGCACGAAGCCGTGGATCAAGCCGTGGCGCGGTGTCCCGGTCTCCCGCCCCTTGCGGGCCTGCGGGATCCCGTACCGCG
GTATGAACGTGTTCTGGCTGTGGATGGTCGCTGACATGTGCGGCTACGCCTCGCCGTTCTGGATGACCTACAACCAGGCA
CAATCGCTCGGAGCCCAGGTCCGCAAGGGCGAGAAGTCGACCATCGCGATATTCTACAAGAGCTACACCAAGGAGGTGGA
AGCCCCCGATACCGGCGAAAAGACCGACGAAGCCCGCCGGGTGCTGAAGGCCTATCCGGTCTTCAATGCCGATCAGGTCG
AAGGTCTGCCCGAGCGCTTCCATCCGGCCGCAACGCTCGAACTGGTCGAGCCTGAAGGGCGCGAGGCCGAGCTCGACGCC
TTCTTCGCTGCCATCCCAGTCAATTTGCGTCATCAGGGCTGCGAAGCCTATTATGAACCGACTGCGGATCGCGTCACGAT
GCCGCCGGTCAGCCTGTTTGGCGGGTTCGATCACTACTATGCCACGCTCGCCCACGAGCTGTCGCACTGGACCGGCCATG
CCAGCCGCCTGGGCCGCGATCTCAAGAACCGCTTCGGCACTTCCGCCTACGCCGCCGAAGAACTGGTCGCCGAACTCTCC
AGTGCCATGCTGGGTGCTGAGCTGGGGCTGCCGGTCACGCATCTCGACAGCCACGCGAGCTATATCGAGCACTGGCTCAA
GCTTCTGAAGGACGACGACCGCGCCATCCTGACCGCTGCGGCCAAGGCCGAAGAAGCTGCGAGCCTGCTGCTGAAGCTCG
GCGGGAAGATCATTCCCGAGCAGTCTGACGATGCGTCCGACGACGCTGCGCTGGCGGCCTGA

Upstream 100 bases:

>100_bases
CTTCCTTTTTGGAAGGAGAGCGGAGGGGGCTCGAGACCTTGTGGCACTGACCGGCGAGCCCGTCGCCGACTGTCCGGATG
CCTCAATCAGGAGACCCATC

Downstream 100 bases:

>100_bases
GGGAGGATGCCATGGGCCGATCAGTCAGCTATCCCAGCGGCGCAATTGTCGCCTTTACGGTGCTCGACGTTGAAAGCGAC
GACGATTGGGAATTCGAGTA

Product: antirestriction protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MAYRKGQSGGLSPATRITQEIIARLEAGTKPWIKPWRGVPVSRPLRACGIPYRGMNVFWLWMVADMCGYASPFWMTYNQA
QSLGAQVRKGEKSTIAIFYKSYTKEVEAPDTGEKTDEARRVLKAYPVFNADQVEGLPERFHPAATLELVEPEGREAELDA
FFAAIPVNLRHQGCEAYYEPTADRVTMPPVSLFGGFDHYYATLAHELSHWTGHASRLGRDLKNRFGTSAYAAEELVAELS
SAMLGAELGLPVTHLDSHASYIEHWLKLLKDDDRAILTAAAKAEEAASLLLKLGGKIIPEQSDDASDDAALAA

Sequences:

>Translated_313_residues
MAYRKGQSGGLSPATRITQEIIARLEAGTKPWIKPWRGVPVSRPLRACGIPYRGMNVFWLWMVADMCGYASPFWMTYNQA
QSLGAQVRKGEKSTIAIFYKSYTKEVEAPDTGEKTDEARRVLKAYPVFNADQVEGLPERFHPAATLELVEPEGREAELDA
FFAAIPVNLRHQGCEAYYEPTADRVTMPPVSLFGGFDHYYATLAHELSHWTGHASRLGRDLKNRFGTSAYAAEELVAELS
SAMLGAELGLPVTHLDSHASYIEHWLKLLKDDDRAILTAAAKAEEAASLLLKLGGKIIPEQSDDASDDAALAA
>Mature_312_residues
AYRKGQSGGLSPATRITQEIIARLEAGTKPWIKPWRGVPVSRPLRACGIPYRGMNVFWLWMVADMCGYASPFWMTYNQAQ
SLGAQVRKGEKSTIAIFYKSYTKEVEAPDTGEKTDEARRVLKAYPVFNADQVEGLPERFHPAATLELVEPEGREAELDAF
FAAIPVNLRHQGCEAYYEPTADRVTMPPVSLFGGFDHYYATLAHELSHWTGHASRLGRDLKNRFGTSAYAAEELVAELSS
AMLGAELGLPVTHLDSHASYIEHWLKLLKDDDRAILTAAAKAEEAASLLLKLGGKIIPEQSDDASDDAALAA

Specific function: Unknown

COG id: COG4227

COG function: function code L; Antirestriction protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017113
- InterPro:   IPR013610 [H]

Pfam domain/function: PF08401 DUF1738 [H]

EC number: NA

Molecular weight: Translated: 34501; Mature: 34370

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYRKGQSGGLSPATRITQEIIARLEAGTKPWIKPWRGVPVSRPLRACGIPYRGMNVFWL
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHH
WMVADMCGYASPFWMTYNQAQSLGAQVRKGEKSTIAIFYKSYTKEVEAPDTGEKTDEARR
HHHHHHHCCCCCHHEEHHHHHHHHHHHHCCCCCEEEEEEEHHHCCCCCCCCCCCHHHHHH
VLKAYPVFNADQVEGLPERFHPAATLELVEPEGREAELDAFFAAIPVNLRHQGCEAYYEP
HHHHCCCCCCHHHCCCHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCHHHCCCHHHCCC
TADRVTMPPVSLFGGFDHYYATLAHELSHWTGHASRLGRDLKNRFGTSAYAAEELVAELS
CCCCEECCCHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SAMLGAELGLPVTHLDSHASYIEHWLKLLKDDDRAILTAAAKAEEAASLLLKLGGKIIPE
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
QSDDASDDAALAA
CCCCCCCCHHCCC
>Mature Secondary Structure 
AYRKGQSGGLSPATRITQEIIARLEAGTKPWIKPWRGVPVSRPLRACGIPYRGMNVFWL
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHH
WMVADMCGYASPFWMTYNQAQSLGAQVRKGEKSTIAIFYKSYTKEVEAPDTGEKTDEARR
HHHHHHHCCCCCHHEEHHHHHHHHHHHHCCCCCEEEEEEEHHHCCCCCCCCCCCHHHHHH
VLKAYPVFNADQVEGLPERFHPAATLELVEPEGREAELDAFFAAIPVNLRHQGCEAYYEP
HHHHCCCCCCHHHCCCHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCHHHCCCHHHCCC
TADRVTMPPVSLFGGFDHYYATLAHELSHWTGHASRLGRDLKNRFGTSAYAAEELVAELS
CCCCEECCCHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SAMLGAELGLPVTHLDSHASYIEHWLKLLKDDDRAILTAAAKAEEAASLLLKLGGKIIPE
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
QSDDASDDAALAA
CCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]