| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103485916
Identifier: 103485916
GI number: 103485916
Start: 429651
End: 430079
Strand: Reverse
Name: 103485916
Synonym: Sala_0423
Alternate gene names: NA
Gene position: 430079-429651 (Counterclockwise)
Preceding gene: 103485917
Following gene: 103485915
Centisome position: 12.86
GC content: 63.87
Gene sequence:
>429_bases ATGGCCCATTGCTATTACCACGCCCTCTCGTCGGTCCGGAAATGGGGCGGCAGGGTCGATGACTATCTCCCGCTGCACCA GTGGTTCGACCAGTCCAAGGCAATCCTGGCAGACCCTCGGCACCGCGCGCTGCGGCACCATGCCGAGGGGATATTCATGC TCGAAACCTTGTTCGGCGAGACCCTCGTCAATGCTGATGGCCGGGTCGTTCCGGTGCGTCTGGTCGGCGAACAGCACGTA CGCGAAGACCTGGGGTCGATCCCCTCCTTTGCGGACTGGGCGCGCTTGATCACGCCGCAGGCCTGGATGCTGCGAGGCAA CCCTCTGGACGGCGCTGAAGGGGTGACGATCGATATGCCTGTCCCCGGCGAAGCAGTTGCGTCCAGGACCAGGCCACCTG CTGGAGGAGAGGTCCGTACCGTGATCTAG
Upstream 100 bases:
>100_bases GAACTGGTGATCGATGTGGCTGAAGCGACCTTCGTGCTCGACTGCAGCCTGCGCTTCATCGCTACCGATGATCACTCGAC CGAGCTCTAGGAGACTTGGC
Downstream 100 bases:
>100_bases GAAGGGGTTCTCCGGTGGAGGGCTGGCGGGGGAATGATTCGGCCAAGAACGGAGGGAACCGAGGCAGGGCAAACCTGTTC AAGGCATCCAGCTCCACCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MAHCYYHALSSVRKWGGRVDDYLPLHQWFDQSKAILADPRHRALRHHAEGIFMLETLFGETLVNADGRVVPVRLVGEQHV REDLGSIPSFADWARLITPQAWMLRGNPLDGAEGVTIDMPVPGEAVASRTRPPAGGEVRTVI
Sequences:
>Translated_142_residues MAHCYYHALSSVRKWGGRVDDYLPLHQWFDQSKAILADPRHRALRHHAEGIFMLETLFGETLVNADGRVVPVRLVGEQHV REDLGSIPSFADWARLITPQAWMLRGNPLDGAEGVTIDMPVPGEAVASRTRPPAGGEVRTVI >Mature_141_residues AHCYYHALSSVRKWGGRVDDYLPLHQWFDQSKAILADPRHRALRHHAEGIFMLETLFGETLVNADGRVVPVRLVGEQHVR EDLGSIPSFADWARLITPQAWMLRGNPLDGAEGVTIDMPVPGEAVASRTRPPAGGEVRTVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15801; Mature: 15670
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHCYYHALSSVRKWGGRVDDYLPLHQWFDQSKAILADPRHRALRHHAEGIFMLETLFGE CCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH TLVNADGRVVPVRLVGEQHVREDLGSIPSFADWARLITPQAWMLRGNPLDGAEGVTIDMP HHCCCCCCEEEEEECCHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCCCCCCCEEEECC VPGEAVASRTRPPAGGEVRTVI CCCHHHHHCCCCCCCCCEEECC >Mature Secondary Structure AHCYYHALSSVRKWGGRVDDYLPLHQWFDQSKAILADPRHRALRHHAEGIFMLETLFGE CHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH TLVNADGRVVPVRLVGEQHVREDLGSIPSFADWARLITPQAWMLRGNPLDGAEGVTIDMP HHCCCCCCEEEEEECCHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCCCCCCCEEEECC VPGEAVASRTRPPAGGEVRTVI CCCHHHHHCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA