| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is zraS [C]
Identifier: 103485897
GI number: 103485897
Start: 413007
End: 413822
Strand: Reverse
Name: zraS [C]
Synonym: Sala_0403
Alternate gene names: 103485897
Gene position: 413822-413007 (Counterclockwise)
Preceding gene: 103485898
Following gene: 103485896
Centisome position: 12.37
GC content: 56.37
Gene sequence:
>816_bases GTGGATTTGCCTGAGAAGCGACTATCAGGTACATTTTGGCACAGGAGGCCGGTCATGAAGCGTCAATTCCAGAGTAGCTT TCGGGACATGATGCCAGCAGGAACGTCGTCAGTGACCCCTCTGCCATCGACGGAAGACCTGACAAGCATGCTTGCCGTGC TGGCTGCGGGCCTTGAAACGTTGGAATTCGCCGATGAGCAGGAGGCGATCAAGCTTCGTCGCAAGATGCGTTTGGCGCTA CTCAATTCGGCCAGATTAGTAAGCAATTGGTCTGTTCCAGCTGCTCATTCGCCGCTTCAAGAATTGGTCGATGTGCCAGA GTTGATCGAGCATTTGATGGACCAGATCCAGTCAGGAATTCCAGTGGAGGCGGAGTTTGAAAAGACTCTTGAAACAGGTT TGTGGCCGGTTCGGGTTGCCCCTGCCTCTTTCGCCAGCGCCTTATCGGCCCTGCTTGAAAATGCATTTCTGGCTGCCGGA GGAAATGGTGGGAAAGTATCTTTGCGCTTGAGGAACCGCCCGGCGATTGACGCTCTCCCCGAGCGGATTGAAATTGAAGT TGCCGACAATGGCCCTGGGCTCAGACGCGATGCGATCGCGCTGGCTTTCGAGCCGTTCTATTCGAATTGGGGCGCTGATC AACGCCTTGGGCTCGGACTTACTCATGCGCAGCGCTTCGCACAGAAGTCGGGAGGCAGCATAAGCTTGGTGCCTCGATCA CCCAGTGGGGTCCGCGCAGTCTTGTGGCTGCCGCGCGCATACGACCATTCCGCCAGCCGATCCAGCCAGATCGCTGACGT GATCCTTCTGCGTTAG
Upstream 100 bases:
>100_bases TGGCGAGAAAAGAATGAATACAATCCCCGCTCGAAGCTGGGTGTCTAATGCGATCACATTGGGACAGGCAAGGCTGATCC GAAACGCCTGATCTGGATCA
Downstream 100 bases:
>100_bases GGGAGCGGCGAACCCTCGCCTGCAACTATCTTAGTCTACTGTTTTCTGGAGCTGCAAACCATGGCTAAAGTTATCGGTAT CGATCTCGGAACAACCAACA
Product: histidine kinase
Products: NA
Alternate protein names: Signal Transduction Histidine Kinase
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MDLPEKRLSGTFWHRRPVMKRQFQSSFRDMMPAGTSSVTPLPSTEDLTSMLAVLAAGLETLEFADEQEAIKLRRKMRLAL LNSARLVSNWSVPAAHSPLQELVDVPELIEHLMDQIQSGIPVEAEFEKTLETGLWPVRVAPASFASALSALLENAFLAAG GNGGKVSLRLRNRPAIDALPERIEIEVADNGPGLRRDAIALAFEPFYSNWGADQRLGLGLTHAQRFAQKSGGSISLVPRS PSGVRAVLWLPRAYDHSASRSSQIADVILLR
Sequences:
>Translated_271_residues MDLPEKRLSGTFWHRRPVMKRQFQSSFRDMMPAGTSSVTPLPSTEDLTSMLAVLAAGLETLEFADEQEAIKLRRKMRLAL LNSARLVSNWSVPAAHSPLQELVDVPELIEHLMDQIQSGIPVEAEFEKTLETGLWPVRVAPASFASALSALLENAFLAAG GNGGKVSLRLRNRPAIDALPERIEIEVADNGPGLRRDAIALAFEPFYSNWGADQRLGLGLTHAQRFAQKSGGSISLVPRS PSGVRAVLWLPRAYDHSASRSSQIADVILLR >Mature_271_residues MDLPEKRLSGTFWHRRPVMKRQFQSSFRDMMPAGTSSVTPLPSTEDLTSMLAVLAAGLETLEFADEQEAIKLRRKMRLAL LNSARLVSNWSVPAAHSPLQELVDVPELIEHLMDQIQSGIPVEAEFEKTLETGLWPVRVAPASFASALSALLENAFLAAG GNGGKVSLRLRNRPAIDALPERIEIEVADNGPGLRRDAIALAFEPFYSNWGADQRLGLGLTHAQRFAQKSGGSISLVPRS PSGVRAVLWLPRAYDHSASRSSQIADVILLR
Specific function: Member Of The Two-Component Regulatory System Zras/Zrar. May Function As A Membrane-Associated Protein Kinase That Phosphorylates Zrar In Response To High Concentrations Of Zinc Or Lead In The Medium. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.3.- [C]
Molecular weight: Translated: 29697; Mature: 29697
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLPEKRLSGTFWHRRPVMKRQFQSSFRDMMPAGTSSVTPLPSTEDLTSMLAVLAAGLET CCCCHHHHCCCHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LEFADEQEAIKLRRKMRLALLNSARLVSNWSVPAAHSPLQELVDVPELIEHLMDQIQSGI HHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHCCC PVEAEFEKTLETGLWPVRVAPASFASALSALLENAFLAAGGNGGKVSLRLRNRPAIDALP CCCHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCHHHCC ERIEIEVADNGPGLRRDAIALAFEPFYSNWGADQRLGLGLTHAQRFAQKSGGSISLVPRS CEEEEEECCCCCCCCHHHHHEEEEHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECC PSGVRAVLWLPRAYDHSASRSSQIADVILLR CCCCEEEEECCCHHCCCCCCHHHHHHHEECC >Mature Secondary Structure MDLPEKRLSGTFWHRRPVMKRQFQSSFRDMMPAGTSSVTPLPSTEDLTSMLAVLAAGLET CCCCHHHHCCCHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LEFADEQEAIKLRRKMRLALLNSARLVSNWSVPAAHSPLQELVDVPELIEHLMDQIQSGI HHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHCCC PVEAEFEKTLETGLWPVRVAPASFASALSALLENAFLAAGGNGGKVSLRLRNRPAIDALP CCCHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCHHHCC ERIEIEVADNGPGLRRDAIALAFEPFYSNWGADQRLGLGLTHAQRFAQKSGGSISLVPRS CEEEEEECCCCCCCCHHHHHEEEEHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECC PSGVRAVLWLPRAYDHSASRSSQIADVILLR CCCCEEEEECCCHHCCCCCCHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA