The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485796

Identifier: 103485796

GI number: 103485796

Start: 300409

End: 301032

Strand: Reverse

Name: 103485796

Synonym: Sala_0301

Alternate gene names: NA

Gene position: 301032-300409 (Counterclockwise)

Preceding gene: 103485803

Following gene: 103485795

Centisome position: 9.0

GC content: 66.99

Gene sequence:

>624_bases
ATGACGACCGGGGTGACGAAATCGGAAGCGGCGCGAAGCGGCGCCGAGCGGATCGACGGCCGCCGCGCGCGCAGCCGGTC
GAGCCACAAGCGCATCGTCGAGGCGATGATGGAGCTGATCGTCGCGGGCGATTTGTCGCCGAGCGCCGCGCGTGTCGCTG
AGGAAGCGGGCATCGGCCTGCGTACCGTGTTCCGCCATTTCGACGATATGGACGCGCTCTATTCCGAAATCACCGCGACG
GTCACCGACCGCGTGATGCCGATCGTCACGGCGCCCTATCCCGACCAGCCGTGGCGCGCCAATGTCCGCGAACTGGTGCG
GCGCCGCATTCGTGTCTTTGAAACGACGCTGCCCTTTCGCCTTGCGGCGAACATCAAACGCTATCAGTCGCCCTTCCTGA
TGGGTCAGTACAGCCGTGTCGTGATGCTCGAACGCGAGCTGATCCTGCGCCTGCTGCCCGGTCATGTGCTCACCGACCGC
ATCACCGTCGAGGCGCTGTGCGCCGCGCTTTCCTTCCACACCTGGCGCACGCTGCGCCACGACCAGGGGCTGTCGGCCGA
GGAAGCGGGCGAGGTGCTGGGGCAAATGGTGGCGGCGCTGCTGGCGACGGTGGCCGACGAATGA

Upstream 100 bases:

>100_bases
TTCGGCTTGCCCGAAAACTATTGGCACTATATGTGTCATTATATTCGCCGAAGTGCAAGATCGTTTGACGTCGGCGGCGT
GCTGGGCCAGCGAGGATGCG

Downstream 100 bases:

>100_bases
TCCGCAGCGCCGCCTTGCCCGCGCTGCTTCTGATTGGCGCACTCGCAGCGTGCGGCGATGATCCCGACACTCCGCTGGCC
GAAACCAAGCCCCCCGAATG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulatory Protein

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MTTGVTKSEAARSGAERIDGRRARSRSSHKRIVEAMMELIVAGDLSPSAARVAEEAGIGLRTVFRHFDDMDALYSEITAT
VTDRVMPIVTAPYPDQPWRANVRELVRRRIRVFETTLPFRLAANIKRYQSPFLMGQYSRVVMLERELILRLLPGHVLTDR
ITVEALCAALSFHTWRTLRHDQGLSAEEAGEVLGQMVAALLATVADE

Sequences:

>Translated_207_residues
MTTGVTKSEAARSGAERIDGRRARSRSSHKRIVEAMMELIVAGDLSPSAARVAEEAGIGLRTVFRHFDDMDALYSEITAT
VTDRVMPIVTAPYPDQPWRANVRELVRRRIRVFETTLPFRLAANIKRYQSPFLMGQYSRVVMLERELILRLLPGHVLTDR
ITVEALCAALSFHTWRTLRHDQGLSAEEAGEVLGQMVAALLATVADE
>Mature_206_residues
TTGVTKSEAARSGAERIDGRRARSRSSHKRIVEAMMELIVAGDLSPSAARVAEEAGIGLRTVFRHFDDMDALYSEITATV
TDRVMPIVTAPYPDQPWRANVRELVRRRIRVFETTLPFRLAANIKRYQSPFLMGQYSRVVMLERELILRLLPGHVLTDRI
TVEALCAALSFHTWRTLRHDQGLSAEEAGEVLGQMVAALLATVADE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23175; Mature: 23044

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTGVTKSEAARSGAERIDGRRARSRSSHKRIVEAMMELIVAGDLSPSAARVAEEAGIGL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHH
RTVFRHFDDMDALYSEITATVTDRVMPIVTAPYPDQPWRANVRELVRRRIRVFETTLPFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHH
LAANIKRYQSPFLMGQYSRVVMLERELILRLLPGHVLTDRITVEALCAALSFHTWRTLRH
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DQGLSAEEAGEVLGQMVAALLATVADE
CCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTGVTKSEAARSGAERIDGRRARSRSSHKRIVEAMMELIVAGDLSPSAARVAEEAGIGL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHH
RTVFRHFDDMDALYSEITATVTDRVMPIVTAPYPDQPWRANVRELVRRRIRVFETTLPFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHH
LAANIKRYQSPFLMGQYSRVVMLERELILRLLPGHVLTDRITVEALCAALSFHTWRTLRH
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DQGLSAEEAGEVLGQMVAALLATVADE
CCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA