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The map label for this gene is 103485789

Identifier: 103485789

GI number: 103485789

Start: 292085

End: 294085

Strand: Reverse

Name: 103485789

Synonym: Sala_0294

Alternate gene names: NA

Gene position: 294085-292085 (Counterclockwise)

Preceding gene: 103485790

Following gene: 103485782

Centisome position: 8.79

GC content: 66.27

Gene sequence:

>2001_bases
ATGACGGCAACATTCAGTCCGGGGCAGCTCAAGTTCCTGAAGGCGCTGACCGAGGCCTTGTTCGACGGCGCGGCGATGGC
GATCACGCCCGATCAGGTCGTCGCCAATATCGCCGAGCTGTTCGGCAAGGTCGGCGGCACCAAATTGGACGAGATGCGCG
TCTCGCTCATCGCCACCGAAATCGCGCTCGGACCGCTGTTCGCCGAGGTCGATGTCGCGGCGCGCGTCGAGCGGATCGCC
GACCGGCTGCGCGACAGCCGCATCGACCTGTTCCAGGACATGGGGCGGCTGCGCGGCATCGTCTATGCCTGCTATTACGG
CCACTGGCTGCCGGGCGATCAGGACGCCAACGTCGCCAACCCGGTCCACCGCCAGATCGGTTTCGCGCTCCCCCGGTTCC
GCGCGCGCGGGCCGGGCGACGTCCCCATCACGCCCGTGCAGGGCCGCGAGATCGACCCCGCGCATATATTGACCGCCGAT
AGTCTCGACGATGAATATGACGTGATTGTCGTCGGTTCGGGCGCGGGCGGCGCGGTCGCGGGCTATAATATCGCGGCGCA
GGGCTATCGGGTGCTGATCGTCGAGGCGGGGCCCTTCTACCCCAGCCACGCGATCACCCACCACGAACTCGACATGATCG
CGAATCTTTACAAGCATGGCGCGGTGCAGACGACGACCAACCGCGATTTCGTCGTTTTCCAGGGGCGGTGCGTCGGCGGA
TCGTCGACGATCAACAACGGCATCTGCCTGCGCGTCAACGAGCCCGGCCGCACCCACCCCGACGCAGAGGATGTGCTCGC
CAAATGGGCGACCATCGGCGCGCCGATCGACCCCGCGGCCTTTCACGCCAGCTATGACGCGGTGCAGGCGATGCTCGGCA
TCGCGCGCATCGAATCCCGCAGCGGACGGCACAACGGCCCGCACCTCATCAATGGCTGGCGCGCCTATGCCAACGCCTCG
TCCGATCCCAAAGACAAGCGCGCGATCGCCGACTGGTTCGACAAGAATTTCGGCCCGCCGAACACCCCGAATGCCTGCGC
CTATTGCGGCTATTGCAATTCGGGCTGCGCCTATGGCCGCCGCATGGGCGTCGCGCAGACCTATCTGCCCCAGGCGTGCC
GCGATCATGGCGCGCGCATCCTGCCGCGCACCAAGGTCCAGCAGATCCTCTGGCAGACCGCGATCGACGGGCGACGCGAG
GCCGAGGCGGTCAGGCTCGTCCTGCCCGACGGAGCGAACCGCCTCGTCCGCGCGCGCGTCGGCGTCGTTGTCGCCGCGGG
CACGATCGCCTCGTCGAAACTGCTGGCACGCAGCGACATTGACGGCACGGGTTATCAGGTGTCGCTGAACGTCGCCTCGC
CCGTCGTCGCGCTGATGCCGCCGGGCGTCGGCGGCGATGCGTGGGACGAGGACCAGATGTCGAGCTATGTCGATTGCGGC
GACTTTCTGCTCGAAAGCCATTTCCAGCCGCCGATGTCGATGGCCTCGCTGATGCCCGGCTGGTTCGCCGATCACGCCGA
CCGCATGAAGAATTACGGTCGCGTCCATTCGGCGGGCATTCTTTTTCCCGCCGACCGGCGTGGGCAGATCGTCGACGGCA
AGCTCCGGTTCCGGCTCGATTCAACCGACGACCTGCCGCTGCTCCGCCGCGCGATGGCGACGCTGACCAAGGTGCATTTC
GCCGCCGGGGCGATCGAATGCTATCCCGCGCTGGCGAAAGGACAGACGGTGACGCCGGATATGGACATCGACGCCTTTTT
CGAGGCGGCGATTCGCGAACAGGACGATGTAACTCTGTCGAGCAGCCACCCGCACGGCGGCAATGCGATGAACGAGGATT
CGCAGCACGGCGTCGTCGACCTGGATTGCCGCGTCCACGGCACCACAAATGTGCTCGTCACCGACGCCAGCGTCTTTCCC
AGCTGCATCCGCGTCAACGCCCAATGGACCACGATGGCAATGGCGCATTATGCGACGGCGCGCGGCGATCCCTTCCGGTG
A

Upstream 100 bases:

>100_bases
CCGCCGCCTTATTGGCGGTCCGATACAATCGTCTTGCACCGACAGGCGATAGACGGGCATCGACGTTGCAAGGGCAGCGG
CGTCAAAGGGGGCAGCGACG

Downstream 100 bases:

>100_bases
AGCAGGCCATCGGCGCCAGGCTGTATCATCAGGATTGAAGCGCGAGACGGAGCCGACCTGTCGCGAGGCGGGGCGCGAGG
AGGGAGCGATGCTTTTCCAT

Product: glucose-methanol-choline oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 666; Mature: 665

Protein sequence:

>666_residues
MTATFSPGQLKFLKALTEALFDGAAMAITPDQVVANIAELFGKVGGTKLDEMRVSLIATEIALGPLFAEVDVAARVERIA
DRLRDSRIDLFQDMGRLRGIVYACYYGHWLPGDQDANVANPVHRQIGFALPRFRARGPGDVPITPVQGREIDPAHILTAD
SLDDEYDVIVVGSGAGGAVAGYNIAAQGYRVLIVEAGPFYPSHAITHHELDMIANLYKHGAVQTTTNRDFVVFQGRCVGG
SSTINNGICLRVNEPGRTHPDAEDVLAKWATIGAPIDPAAFHASYDAVQAMLGIARIESRSGRHNGPHLINGWRAYANAS
SDPKDKRAIADWFDKNFGPPNTPNACAYCGYCNSGCAYGRRMGVAQTYLPQACRDHGARILPRTKVQQILWQTAIDGRRE
AEAVRLVLPDGANRLVRARVGVVVAAGTIASSKLLARSDIDGTGYQVSLNVASPVVALMPPGVGGDAWDEDQMSSYVDCG
DFLLESHFQPPMSMASLMPGWFADHADRMKNYGRVHSAGILFPADRRGQIVDGKLRFRLDSTDDLPLLRRAMATLTKVHF
AAGAIECYPALAKGQTVTPDMDIDAFFEAAIREQDDVTLSSSHPHGGNAMNEDSQHGVVDLDCRVHGTTNVLVTDASVFP
SCIRVNAQWTTMAMAHYATARGDPFR

Sequences:

>Translated_666_residues
MTATFSPGQLKFLKALTEALFDGAAMAITPDQVVANIAELFGKVGGTKLDEMRVSLIATEIALGPLFAEVDVAARVERIA
DRLRDSRIDLFQDMGRLRGIVYACYYGHWLPGDQDANVANPVHRQIGFALPRFRARGPGDVPITPVQGREIDPAHILTAD
SLDDEYDVIVVGSGAGGAVAGYNIAAQGYRVLIVEAGPFYPSHAITHHELDMIANLYKHGAVQTTTNRDFVVFQGRCVGG
SSTINNGICLRVNEPGRTHPDAEDVLAKWATIGAPIDPAAFHASYDAVQAMLGIARIESRSGRHNGPHLINGWRAYANAS
SDPKDKRAIADWFDKNFGPPNTPNACAYCGYCNSGCAYGRRMGVAQTYLPQACRDHGARILPRTKVQQILWQTAIDGRRE
AEAVRLVLPDGANRLVRARVGVVVAAGTIASSKLLARSDIDGTGYQVSLNVASPVVALMPPGVGGDAWDEDQMSSYVDCG
DFLLESHFQPPMSMASLMPGWFADHADRMKNYGRVHSAGILFPADRRGQIVDGKLRFRLDSTDDLPLLRRAMATLTKVHF
AAGAIECYPALAKGQTVTPDMDIDAFFEAAIREQDDVTLSSSHPHGGNAMNEDSQHGVVDLDCRVHGTTNVLVTDASVFP
SCIRVNAQWTTMAMAHYATARGDPFR
>Mature_665_residues
TATFSPGQLKFLKALTEALFDGAAMAITPDQVVANIAELFGKVGGTKLDEMRVSLIATEIALGPLFAEVDVAARVERIAD
RLRDSRIDLFQDMGRLRGIVYACYYGHWLPGDQDANVANPVHRQIGFALPRFRARGPGDVPITPVQGREIDPAHILTADS
LDDEYDVIVVGSGAGGAVAGYNIAAQGYRVLIVEAGPFYPSHAITHHELDMIANLYKHGAVQTTTNRDFVVFQGRCVGGS
STINNGICLRVNEPGRTHPDAEDVLAKWATIGAPIDPAAFHASYDAVQAMLGIARIESRSGRHNGPHLINGWRAYANASS
DPKDKRAIADWFDKNFGPPNTPNACAYCGYCNSGCAYGRRMGVAQTYLPQACRDHGARILPRTKVQQILWQTAIDGRREA
EAVRLVLPDGANRLVRARVGVVVAAGTIASSKLLARSDIDGTGYQVSLNVASPVVALMPPGVGGDAWDEDQMSSYVDCGD
FLLESHFQPPMSMASLMPGWFADHADRMKNYGRVHSAGILFPADRRGQIVDGKLRFRLDSTDDLPLLRRAMATLTKVHFA
AGAIECYPALAKGQTVTPDMDIDAFFEAAIREQDDVTLSSSHPHGGNAMNEDSQHGVVDLDCRVHGTTNVLVTDASVFPS
CIRVNAQWTTMAMAHYATARGDPFR

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GMC oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000172
- InterPro:   IPR007867 [H]

Pfam domain/function: PF05199 GMC_oxred_C; PF00732 GMC_oxred_N [H]

EC number: NA

Molecular weight: Translated: 72037; Mature: 71906

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATFSPGQLKFLKALTEALFDGAAMAITPDQVVANIAELFGKVGGTKLDEMRVSLIATE
CCCCCCCCHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
IALGPLFAEVDVAARVERIADRLRDSRIDLFQDMGRLRGIVYACYYGHWLPGDQDANVAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCC
PVHRQIGFALPRFRARGPGDVPITPVQGREIDPAHILTADSLDDEYDVIVVGSGAGGAVA
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHEEEECCCCCCCCEEEEECCCCCCEE
GYNIAAQGYRVLIVEAGPFYPSHAITHHELDMIANLYKHGAVQTTTNRDFVVFQGRCVGG
CCEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCEEEEEEEECCC
SSTINNGICLRVNEPGRTHPDAEDVLAKWATIGAPIDPAAFHASYDAVQAMLGIARIESR
CCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
SGRHNGPHLINGWRAYANASSDPKDKRAIADWFDKNFGPPNTPNACAYCGYCNSGCAYGR
CCCCCCCCEECCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHH
RMGVAQTYLPQACRDHGARILPRTKVQQILWQTAIDGRREAEAVRLVLPDGANRLVRARV
HCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHH
GVVVAAGTIASSKLLARSDIDGTGYQVSLNVASPVVALMPPGVGGDAWDEDQMSSYVDCG
CEEEEECCHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHH
DFLLESHFQPPMSMASLMPGWFADHADRMKNYGRVHSAGILFPADRRGQIVDGKLRFRLD
HHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHCCCEECCCEEEECCCCCCEECCEEEEEEC
STDDLPLLRRAMATLTKVHFAAGAIECYPALAKGQTVTPDMDIDAFFEAAIREQDDVTLS
CCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEE
SSHPHGGNAMNEDSQHGVVDLDCRVHGTTNVLVTDASVFPSCIRVNAQWTTMAMAHYATA
CCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEECHHHCCHHHEECCCHHHHHHHHHHHC
RGDPFR
CCCCCC
>Mature Secondary Structure 
TATFSPGQLKFLKALTEALFDGAAMAITPDQVVANIAELFGKVGGTKLDEMRVSLIATE
CCCCCCCHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
IALGPLFAEVDVAARVERIADRLRDSRIDLFQDMGRLRGIVYACYYGHWLPGDQDANVAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCC
PVHRQIGFALPRFRARGPGDVPITPVQGREIDPAHILTADSLDDEYDVIVVGSGAGGAVA
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHEEEECCCCCCCCEEEEECCCCCCEE
GYNIAAQGYRVLIVEAGPFYPSHAITHHELDMIANLYKHGAVQTTTNRDFVVFQGRCVGG
CCEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCEEEEEEEECCC
SSTINNGICLRVNEPGRTHPDAEDVLAKWATIGAPIDPAAFHASYDAVQAMLGIARIESR
CCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
SGRHNGPHLINGWRAYANASSDPKDKRAIADWFDKNFGPPNTPNACAYCGYCNSGCAYGR
CCCCCCCCEECCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHH
RMGVAQTYLPQACRDHGARILPRTKVQQILWQTAIDGRREAEAVRLVLPDGANRLVRARV
HCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHH
GVVVAAGTIASSKLLARSDIDGTGYQVSLNVASPVVALMPPGVGGDAWDEDQMSSYVDCG
CEEEEECCHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHH
DFLLESHFQPPMSMASLMPGWFADHADRMKNYGRVHSAGILFPADRRGQIVDGKLRFRLD
HHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHCCCEECCCEEEECCCCCCEECCEEEEEEC
STDDLPLLRRAMATLTKVHFAAGAIECYPALAKGQTVTPDMDIDAFFEAAIREQDDVTLS
CCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEE
SSHPHGGNAMNEDSQHGVVDLDCRVHGTTNVLVTDASVFPSCIRVNAQWTTMAMAHYATA
CCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEECHHHCCHHHEECCCHHHHHHHHHHHC
RGDPFR
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]