Click here to switch to the map view.

The map label for this gene is rsmI [H]

Identifier: 103485758

GI number: 103485758

Start: 263756

End: 264616

Strand: Reverse

Name: rsmI [H]

Synonym: Sala_0263

Alternate gene names: 103485758

Gene position: 264616-263756 (Counterclockwise)

Preceding gene: 103485761

Following gene: 103485757

Centisome position: 7.91

GC content: 70.62

Gene sequence:

>861_bases
ATGCCAGATTCGACCATCCCAGATTCTCCCTTGCCCGGTCTCTATATCGTCGCGACCCCCATCGGCAACCTCGGCGACAT
CGGCGTGCGCGCCGCGGCGACGCTGGCGTCGGCTGACCTGATCGCGGCGGAGGATACGCGCGTCACCGCCAAGCTGCTCG
CGCACCTGGGTCTGCGCGTGCCGATGACCCCCTATCACGACCACAGCGACGAACGCACCCGCGCCGCGCTGGTTGCGCGA
ATGGCAAGCGAGGTCGTCGTGCTGGTGTCGGACGCCGGAACCCCGCTGATTTCGGATCCCGGTTACAAGCTGGTGCGCGA
CGCGCGCGCGGCGGGGCGCCACATCACCACCCTGCCCGGCCCCTGCGCCGCAATCGCCGCGATCACGCTGTCGGGGCTGC
CGAGCGACCGCTTCCTCTTCGCGGGCTTCCTGCCCAACAAGGCCAAGGCGCGCGCTGACACGATCGCCGAGTTCGCGGGC
CTGCGCGCCAGCCTCGTCTTTTACGAAAGCGGCCCGCGCCTCGCCGCCGCACTTGCGGCGCTGGCGGAGGGACTTGGCAA
CCGCGAGGCGGCGGTCGCGCGCGAAATTACCAAGCTTTACGAGGAATGCGTCACCGGCCCGCTCGCCGACCTCGCCGCGC
GCTATGAACAGGCACCACCGAAGGGCGAGATCGTCATCGTCGTCGGCCCGCCCGGCGAAGCCGCGGCCGAGGAAGCCGAC
GATGCGATGCTCGACGCGGCGCTCCGCGACGCGATGGCCGACAAGCCCGTCGCACAGGCGGCGAAAGCGGTCGCCAAACG
CTTCGGCCGCGACCGCCACGCCATCTACGCCCGCGCGCTGGCGCTCAAGGGCCAGGCTTGA

Upstream 100 bases:

>100_bases
CACCGCGCCGAGTCCGCGCAGCAATTGCCGCCGCGGCGACGCATTATTCTGGCGCAAGCCATCATAGCAGTTTGAGGCAG
TTTCTGCCATTTTCGGCGTC

Downstream 100 bases:

>100_bases
CCCGCGCCGCCGCCGAAGCGCGCGGCCGCCGCGCCGAGCGCCGTGCCGCCTGGTGGCTGCGCCTCCATGGCTGGCGCATC
GTGGGGCAGCGGCTGCGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MPDSTIPDSPLPGLYIVATPIGNLGDIGVRAAATLASADLIAAEDTRVTAKLLAHLGLRVPMTPYHDHSDERTRAALVAR
MASEVVVLVSDAGTPLISDPGYKLVRDARAAGRHITTLPGPCAAIAAITLSGLPSDRFLFAGFLPNKAKARADTIAEFAG
LRASLVFYESGPRLAAALAALAEGLGNREAAVAREITKLYEECVTGPLADLAARYEQAPPKGEIVIVVGPPGEAAAEEAD
DAMLDAALRDAMADKPVAQAAKAVAKRFGRDRHAIYARALALKGQA

Sequences:

>Translated_286_residues
MPDSTIPDSPLPGLYIVATPIGNLGDIGVRAAATLASADLIAAEDTRVTAKLLAHLGLRVPMTPYHDHSDERTRAALVAR
MASEVVVLVSDAGTPLISDPGYKLVRDARAAGRHITTLPGPCAAIAAITLSGLPSDRFLFAGFLPNKAKARADTIAEFAG
LRASLVFYESGPRLAAALAALAEGLGNREAAVAREITKLYEECVTGPLADLAARYEQAPPKGEIVIVVGPPGEAAAEEAD
DAMLDAALRDAMADKPVAQAAKAVAKRFGRDRHAIYARALALKGQA
>Mature_285_residues
PDSTIPDSPLPGLYIVATPIGNLGDIGVRAAATLASADLIAAEDTRVTAKLLAHLGLRVPMTPYHDHSDERTRAALVARM
ASEVVVLVSDAGTPLISDPGYKLVRDARAAGRHITTLPGPCAAIAAITLSGLPSDRFLFAGFLPNKAKARADTIAEFAGL
RASLVFYESGPRLAAALAALAEGLGNREAAVAREITKLYEECVTGPLADLAARYEQAPPKGEIVIVVGPPGEAAAEEADD
AMLDAALRDAMADKPVAQAAKAVAKRFGRDRHAIYARALALKGQA

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=290, Percent_Identity=42.7586206896552, Blast_Score=198, Evalue=4e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 29729; Mature: 29598

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDSTIPDSPLPGLYIVATPIGNLGDIGVRAAATLASADLIAAEDTRVTAKLLAHLGLRV
CCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCCC
PMTPYHDHSDERTRAALVARMASEVVVLVSDAGTPLISDPGYKLVRDARAAGRHITTLPG
CCCCCCCCCCHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHHHHHHCCCEECCCCC
PCAAIAAITLSGLPSDRFLFAGFLPNKAKARADTIAEFAGLRASLVFYESGPRLAAALAA
HHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHH
LAEGLGNREAAVAREITKLYEECVTGPLADLAARYEQAPPKGEIVIVVGPPGEAAAEEAD
HHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHH
DAMLDAALRDAMADKPVAQAAKAVAKRFGRDRHAIYARALALKGQA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PDSTIPDSPLPGLYIVATPIGNLGDIGVRAAATLASADLIAAEDTRVTAKLLAHLGLRV
CCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCCC
PMTPYHDHSDERTRAALVARMASEVVVLVSDAGTPLISDPGYKLVRDARAAGRHITTLPG
CCCCCCCCCCHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHHHHHHCCCEECCCCC
PCAAIAAITLSGLPSDRFLFAGFLPNKAKARADTIAEFAGLRASLVFYESGPRLAAALAA
HHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHH
LAEGLGNREAAVAREITKLYEECVTGPLADLAARYEQAPPKGEIVIVVGPPGEAAAEEAD
HHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHH
DAMLDAALRDAMADKPVAQAAKAVAKRFGRDRHAIYARALALKGQA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA