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The map label for this gene is yfiB [H]

Identifier: 103485733

GI number: 103485733

Start: 243434

End: 243946

Strand: Reverse

Name: yfiB [H]

Synonym: Sala_0237

Alternate gene names: 103485733

Gene position: 243946-243434 (Counterclockwise)

Preceding gene: 103485734

Following gene: 103485732

Centisome position: 7.29

GC content: 67.84

Gene sequence:

>513_bases
ATGACCATCCCACTCGTCCGACCGTTATGTACGCTGTTCCTGACCGCTTTCGCCGCGCTGCTGGCGGCGTGCCAGAGCCT
GCCCGCCCCCGGCGGATTCTCTCCCGAACAGGTCGCGGTGCTCAAAAGCGAGGGTTTTGTCGAAACCGCGCTCGGCTGGG
AACTCAGCATGCCCGAACGCCTGCTGTTCCCCACCAACGAAAGCGCCGTGCCCGCCGAACAGCAGGAACGGATGCGGGCG
ATCGCGATGCGGCTCGTGTCGGTCGGCATCACGACCGCGCGGGTCGAAGGCCACACCGATTCGACGGGAAGCTCGGCCTA
TAATCTGACGCTGTCGCGGGCGCGCGCGGAGGCGGTCGCGGCTCCGATGCGCGCGGGCGGCATGACGTTCACCGCCGATC
AGATCGTCGGCCGCGGCGAAACGCTGCCGCTGTCGGGCAACGACACGGCCGAAGGGCGGCAGGATAACCGGCGCGTGGTG
GTGATTGTCACGCCGGCGCTTGCGTCGCAATAG

Upstream 100 bases:

>100_bases
ACGATGGCGGCGACGCCACCGCGCTGCTCACCGCCGCCGATGCGGCGATGTATAGCGAAAAGATGACTCATCGTTCCCGA
TAGACCAGCGGAGAGAAGCC

Downstream 100 bases:

>100_bases
GCACCCGGCCCGTCCGCCGCCCCTTTTCCTCCGCGGCGTTCGTCGCTAGGTCCGGCAACCATGAAACCGATCCGCAAAGC
CGTTTTTCCCGTCGCCGGCC

Product: OmpA/MotB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MTIPLVRPLCTLFLTAFAALLAACQSLPAPGGFSPEQVAVLKSEGFVETALGWELSMPERLLFPTNESAVPAEQQERMRA
IAMRLVSVGITTARVEGHTDSTGSSAYNLTLSRARAEAVAAPMRAGGMTFTADQIVGRGETLPLSGNDTAEGRQDNRRVV
VIVTPALASQ

Sequences:

>Translated_170_residues
MTIPLVRPLCTLFLTAFAALLAACQSLPAPGGFSPEQVAVLKSEGFVETALGWELSMPERLLFPTNESAVPAEQQERMRA
IAMRLVSVGITTARVEGHTDSTGSSAYNLTLSRARAEAVAAPMRAGGMTFTADQIVGRGETLPLSGNDTAEGRQDNRRVV
VIVTPALASQ
>Mature_169_residues
TIPLVRPLCTLFLTAFAALLAACQSLPAPGGFSPEQVAVLKSEGFVETALGWELSMPERLLFPTNESAVPAEQQERMRAI
AMRLVSVGITTARVEGHTDSTGSSAYNLTLSRARAEAVAAPMRAGGMTFTADQIVGRGETLPLSGNDTAEGRQDNRRVVV
IVTPALASQ

Specific function: Unknown

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1788957, Length=165, Percent_Identity=39.3939393939394, Blast_Score=116, Evalue=7e-28,
Organism=Escherichia coli, GI48994946, Length=111, Percent_Identity=32.4324324324324, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 17971; Mature: 17840

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIPLVRPLCTLFLTAFAALLAACQSLPAPGGFSPEQVAVLKSEGFVETALGWELSMPER
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEECCCCCEEHHCCCEECCCCE
LLFPTNESAVPAEQQERMRAIAMRLVSVGITTARVEGHTDSTGSSAYNLTLSRARAEAVA
EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHH
APMRAGGMTFTADQIVGRGETLPLSGNDTAEGRQDNRRVVVIVTPALASQ
HHHHCCCEEEEHHHHHCCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure 
TIPLVRPLCTLFLTAFAALLAACQSLPAPGGFSPEQVAVLKSEGFVETALGWELSMPER
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEECCCCCEEHHCCCEECCCCE
LLFPTNESAVPAEQQERMRAIAMRLVSVGITTARVEGHTDSTGSSAYNLTLSRARAEAVA
EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHH
APMRAGGMTFTADQIVGRGETLPLSGNDTAEGRQDNRRVVVIVTPALASQ
HHHHCCCEEEEHHHHHCCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 6357787; 9205837; 9278503; 6298574 [H]