Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is exoN [H]

Identifier: 103485732

GI number: 103485732

Start: 242510

End: 243373

Strand: Reverse

Name: exoN [H]

Synonym: Sala_0236

Alternate gene names: 103485732

Gene position: 243373-242510 (Counterclockwise)

Preceding gene: 103485733

Following gene: 103485729

Centisome position: 7.28

GC content: 65.86

Gene sequence:

>864_bases
ATGAAACCGATCCGCAAAGCCGTTTTTCCCGTCGCCGGCCTCGGCACCCGCTTCCTGCCGGCGACCAAGGCGATTCCGAA
GGAGATGCTGCCCGTCGTCGACCGGCCGCTCATCCAATATGCGGTCGACGAAGCGCGCGAGGCGGGGATCGAGCAGATGA
TCTTCGTCACCGGCCGCGGCAAGAGCGCGATCGAGGATCATTTCGACATCGCCTTCGAACTGGAAAAGACGATGTCGGAG
CGCGGCAAGGATCTGTCGGTGCTGACGCCCACGCGCCTCGGCCCCGGCGCCTGCGCCTATGTCCGCCAGCAGGAACCGAT
GGGGCTGGGTCACGCCATCTGGTGCGCGCGCGACATCGTCGGTGACGAGCCCTTTGCCATCTTCCTGCCCGACGAGTTCA
TGCACGGCATCCCCGGCTGCATGAAGCAGATGGTCGATGCCTATGCGCGCGTCGGCGGCAATCTGATCTCGGTCCTCGAA
GTGCCGCACGAACAGGTGTCGAGCTATGGCGTGATCGCCCCCGGCGCGCGCGACGGCGCGCTTACCGAGGTCAAGGGGCT
GGTCGAGAAGCCACCGGTTGCCGAAGCGCCGTCCAATCTCATCATCTCGGGCCGCTACATCCTGCAACCCGAAGTCATGC
GCGTGCTCGAACGCCAGGAGAAGGGCGCCGGCGGCGAAATCCAGCTCACCGACGCCATGGCGACGATGATCGGCGCGCAG
CCCTTCCACGCCGTGACCTTCGCCGGCGCGCGCTACGATTGCGGGTCGAAGGCAGGCTATATCCAGGCCAATCTGGCGGT
CGCGCTCGAACGCCCCGACATTGCGGCCGACGTCCGCGCCTTCGCCATCGACCTGCTCAAATAG

Upstream 100 bases:

>100_bases
CGTGGTGGTGATTGTCACGCCGGCGCTTGCGTCGCAATAGGCACCCGGCCCGTCCGCCGCCCCTTTTCCTCCGCGGCGTT
CGTCGCTAGGTCCGGCAACC

Downstream 100 bases:

>100_bases
GACCGGCGGAGGCGGGGCGCTTCCACCGGCCGATACGTCATTCGCCCTCGATATTCGGTTTCGGGAAGCTGTCGGCGCCC
AGCGTCTTGTAAAGCACGCC

Product: UTP-glucose-1-phosphate uridylyltransferase

Products: NA

Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MKPIRKAVFPVAGLGTRFLPATKAIPKEMLPVVDRPLIQYAVDEAREAGIEQMIFVTGRGKSAIEDHFDIAFELEKTMSE
RGKDLSVLTPTRLGPGACAYVRQQEPMGLGHAIWCARDIVGDEPFAIFLPDEFMHGIPGCMKQMVDAYARVGGNLISVLE
VPHEQVSSYGVIAPGARDGALTEVKGLVEKPPVAEAPSNLIISGRYILQPEVMRVLERQEKGAGGEIQLTDAMATMIGAQ
PFHAVTFAGARYDCGSKAGYIQANLAVALERPDIAADVRAFAIDLLK

Sequences:

>Translated_287_residues
MKPIRKAVFPVAGLGTRFLPATKAIPKEMLPVVDRPLIQYAVDEAREAGIEQMIFVTGRGKSAIEDHFDIAFELEKTMSE
RGKDLSVLTPTRLGPGACAYVRQQEPMGLGHAIWCARDIVGDEPFAIFLPDEFMHGIPGCMKQMVDAYARVGGNLISVLE
VPHEQVSSYGVIAPGARDGALTEVKGLVEKPPVAEAPSNLIISGRYILQPEVMRVLERQEKGAGGEIQLTDAMATMIGAQ
PFHAVTFAGARYDCGSKAGYIQANLAVALERPDIAADVRAFAIDLLK
>Mature_287_residues
MKPIRKAVFPVAGLGTRFLPATKAIPKEMLPVVDRPLIQYAVDEAREAGIEQMIFVTGRGKSAIEDHFDIAFELEKTMSE
RGKDLSVLTPTRLGPGACAYVRQQEPMGLGHAIWCARDIVGDEPFAIFLPDEFMHGIPGCMKQMVDAYARVGGNLISVLE
VPHEQVSSYGVIAPGARDGALTEVKGLVEKPPVAEAPSNLIISGRYILQPEVMRVLERQEKGAGGEIQLTDAMATMIGAQ
PFHAVTFAGARYDCGSKAGYIQANLAVALERPDIAADVRAFAIDLLK

Specific function: May Play A Role In Stationary Phase Survival. [C]

COG id: COG1210

COG function: function code M; UDP-glucose pyrophosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UDPGP type 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787488, Length=295, Percent_Identity=41.0169491525424, Blast_Score=207, Evalue=5e-55,
Organism=Escherichia coli, GI1788355, Length=269, Percent_Identity=42.0074349442379, Blast_Score=199, Evalue=2e-52,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005835 [H]

Pfam domain/function: PF00483 NTP_transferase [H]

EC number: =2.7.7.9 [H]

Molecular weight: Translated: 31000; Mature: 31000

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPIRKAVFPVAGLGTRFLPATKAIPKEMLPVVDRPLIQYAVDEAREAGIEQMIFVTGRG
CCCHHHHHCCHHCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCC
KSAIEDHFDIAFELEKTMSERGKDLSVLTPTRLGPGACAYVRQQEPMGLGHAIWCARDIV
CHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHC
GDEPFAIFLPDEFMHGIPGCMKQMVDAYARVGGNLISVLEVPHEQVSSYGVIAPGARDGA
CCCCEEEEECHHHHHCCHHHHHHHHHHHHHHCCCEEEHHHCCHHHHHCCCEECCCCCCCH
LTEVKGLVEKPPVAEAPSNLIISGRYILQPEVMRVLERQEKGAGGEIQLTDAMATMIGAQ
HHHHHHHHCCCCCCCCCCCEEEECEEEECHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCC
PFHAVTFAGARYDCGSKAGYIQANLAVALERPDIAADVRAFAIDLLK
CCCEEEECCCCCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKPIRKAVFPVAGLGTRFLPATKAIPKEMLPVVDRPLIQYAVDEAREAGIEQMIFVTGRG
CCCHHHHHCCHHCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCC
KSAIEDHFDIAFELEKTMSERGKDLSVLTPTRLGPGACAYVRQQEPMGLGHAIWCARDIV
CHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHC
GDEPFAIFLPDEFMHGIPGCMKQMVDAYARVGGNLISVLEVPHEQVSSYGVIAPGARDGA
CCCCEEEEECHHHHHCCHHHHHHHHHHHHHHCCCEEEHHHCCHHHHHCCCEECCCCCCCH
LTEVKGLVEKPPVAEAPSNLIISGRYILQPEVMRVLERQEKGAGGEIQLTDAMATMIGAQ
HHHHHHHHCCCCCCCCCCCEEEECEEEECHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCC
PFHAVTFAGARYDCGSKAGYIQANLAVALERPDIAADVRAFAIDLLK
CCCEEEECCCCCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8226645; 8226646; 8246891; 11481431 [H]