| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103485729
Identifier: 103485729
GI number: 103485729
Start: 239874
End: 240182
Strand: Reverse
Name: 103485729
Synonym: Sala_0233
Alternate gene names: NA
Gene position: 240182-239874 (Counterclockwise)
Preceding gene: 103485732
Following gene: 103485727
Centisome position: 7.18
GC content: 69.26
Gene sequence:
>309_bases ATGATGCGCGCCCTGATATTGCCCCTGATGGCCGCTCCCCTGCTCGCGGGCTGCGTCAGCACGGTGAAGTCGGTCGTCAC CGCACCCGTCAAGGCGGTCGGCCAGGTCGCCGACTGGTCGACGACGAGCCAGGACGAGGCCGACCGCAACCGCGGCCGCG AACTGCGCAAGCGCGAGGAGGAGATGGGCAAGCTGGCGCGCCAGCGCGACCAGGCGGCCGAAAAATGCCGCGACGGCGAC GCCGACCAATGCCGCCGCGCCGAAGTGCTCGACCATGAAATCGAAGCCCTGATGGCCGCGCCTTACTGA
Upstream 100 bases:
>100_bases TCAGTGATGTGACATCCCGACCGTGGCGCGCGCCGCTCCGTCGCAAGATACTGTTCAGCTTATGCCGATTATGCGATGGG CAACCACCGCGAGGAGAAAG
Downstream 100 bases:
>100_bases GGCGTCCTTACCGGACCCGCCGCCCCGTCCACACCACGCGCCCGACGAGCCGGATCGCCGACAAAGGCAGGTCGTCCCAG CTGCGGTAATGCGGATTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MMRALILPLMAAPLLAGCVSTVKSVVTAPVKAVGQVADWSTTSQDEADRNRGRELRKREEEMGKLARQRDQAAEKCRDGD ADQCRRAEVLDHEIEALMAAPY
Sequences:
>Translated_102_residues MMRALILPLMAAPLLAGCVSTVKSVVTAPVKAVGQVADWSTTSQDEADRNRGRELRKREEEMGKLARQRDQAAEKCRDGD ADQCRRAEVLDHEIEALMAAPY >Mature_102_residues MMRALILPLMAAPLLAGCVSTVKSVVTAPVKAVGQVADWSTTSQDEADRNRGRELRKREEEMGKLARQRDQAAEKCRDGD ADQCRRAEVLDHEIEALMAAPY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11268; Mature: 11268
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRALILPLMAAPLLAGCVSTVKSVVTAPVKAVGQVADWSTTSQDEADRNRGRELRKREE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH EMGKLARQRDQAAEKCRDGDADQCRRAEVLDHEIEALMAAPY HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMRALILPLMAAPLLAGCVSTVKSVVTAPVKAVGQVADWSTTSQDEADRNRGRELRKREE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH EMGKLARQRDQAAEKCRDGDADQCRRAEVLDHEIEALMAAPY HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA