Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485729

Identifier: 103485729

GI number: 103485729

Start: 239874

End: 240182

Strand: Reverse

Name: 103485729

Synonym: Sala_0233

Alternate gene names: NA

Gene position: 240182-239874 (Counterclockwise)

Preceding gene: 103485732

Following gene: 103485727

Centisome position: 7.18

GC content: 69.26

Gene sequence:

>309_bases
ATGATGCGCGCCCTGATATTGCCCCTGATGGCCGCTCCCCTGCTCGCGGGCTGCGTCAGCACGGTGAAGTCGGTCGTCAC
CGCACCCGTCAAGGCGGTCGGCCAGGTCGCCGACTGGTCGACGACGAGCCAGGACGAGGCCGACCGCAACCGCGGCCGCG
AACTGCGCAAGCGCGAGGAGGAGATGGGCAAGCTGGCGCGCCAGCGCGACCAGGCGGCCGAAAAATGCCGCGACGGCGAC
GCCGACCAATGCCGCCGCGCCGAAGTGCTCGACCATGAAATCGAAGCCCTGATGGCCGCGCCTTACTGA

Upstream 100 bases:

>100_bases
TCAGTGATGTGACATCCCGACCGTGGCGCGCGCCGCTCCGTCGCAAGATACTGTTCAGCTTATGCCGATTATGCGATGGG
CAACCACCGCGAGGAGAAAG

Downstream 100 bases:

>100_bases
GGCGTCCTTACCGGACCCGCCGCCCCGTCCACACCACGCGCCCGACGAGCCGGATCGCCGACAAAGGCAGGTCGTCCCAG
CTGCGGTAATGCGGATTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MMRALILPLMAAPLLAGCVSTVKSVVTAPVKAVGQVADWSTTSQDEADRNRGRELRKREEEMGKLARQRDQAAEKCRDGD
ADQCRRAEVLDHEIEALMAAPY

Sequences:

>Translated_102_residues
MMRALILPLMAAPLLAGCVSTVKSVVTAPVKAVGQVADWSTTSQDEADRNRGRELRKREEEMGKLARQRDQAAEKCRDGD
ADQCRRAEVLDHEIEALMAAPY
>Mature_102_residues
MMRALILPLMAAPLLAGCVSTVKSVVTAPVKAVGQVADWSTTSQDEADRNRGRELRKREEEMGKLARQRDQAAEKCRDGD
ADQCRRAEVLDHEIEALMAAPY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11268; Mature: 11268

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRALILPLMAAPLLAGCVSTVKSVVTAPVKAVGQVADWSTTSQDEADRNRGRELRKREE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
EMGKLARQRDQAAEKCRDGDADQCRRAEVLDHEIEALMAAPY
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMRALILPLMAAPLLAGCVSTVKSVVTAPVKAVGQVADWSTTSQDEADRNRGRELRKREE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
EMGKLARQRDQAAEKCRDGDADQCRRAEVLDHEIEALMAAPY
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA