| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103485681
Identifier: 103485681
GI number: 103485681
Start: 192991
End: 195033
Strand: Direct
Name: 103485681
Synonym: Sala_0185
Alternate gene names: NA
Gene position: 192991-195033 (Clockwise)
Preceding gene: 103485680
Following gene: 103485682
Centisome position: 5.77
GC content: 64.76
Gene sequence:
>2043_bases ATGCTCCGTCTCGCCCCCCTCGCGCTCCTCGCCGCCGCTGCGGCTCCCGCCGCCGCGCAGCAGGCGCCCGCGCCGGTCAC CGCGACCTCGCCCGACCGCAGCCTGGTCCTGACCGTCACGACCGACAATGACGCGCGCCCGACCTGGTCGCTCTCGCGCA AGGGCAAGCTGCTGATCGCGCCATCGAAACTGGGGTTCCTGATGGCCGATCGCGTCGGGCTTCAGCGCGGTTTCCGGATC GAGGGCAGTGAAACCGCCAGTGCCGACAGCCGCTGGGAACAGCCGTGGGGGGAGCGCCGCTTTGTGCGCGACCAGCATAA TGAGCTGCTCGTCCGGTTCCGTCAGCACGAAAGCTGGGGCGGCCATGCGATGAACGTGCGCTTCCGCCTGTTCGACGACG GCATCGGCTTCCGCTACGAACTGCCCGAACAGGAGGGGCTCAAGACCGCGAAGATCGCCGACGAGATCACCGAGTTCGAC ATCGCGGCCGAGGGCACCGCATGGTGGATCGCGGGCGGCGAATGGAACCGTTACGAACAGGTCTATCAGCAGACGCCGAT CGACGCGGTATCGACCGCGCACACGCCGATCACGATGCGCCTTGCCGACGGCACGCACCTCGCGTTCCACGAAGCCGCGC TCGTCGATTATGCCGGCATGTGGCTGAAACGCGTCGAGGGACGCAAGTTCCGCGCGACGCTGGCGCCTTCGTCGCAGGGC CCGCGCGTCGTGCGCGACCTGCCCTTTGCGACGCCGTGGCGGACGATCCGCATTTCGGACGATGCTGCGGGGCTGGTCGA AAGCGACCTCGAACTCAACCTCAACGAACCGAACAAACTGGGCGATGTAAGCTGGGTCAAGCCGATGAAATATATCGGCA TCTGGTGGGGCATGATCCGCGGCCCGTGGAGCTGGGCCGAAGGGCCGAACCATGGCGCGACGACCGAACGCACCAAGCAA TATATCGATTTCGCGGCCAAGCATGGCTTCGGCGGCGTGCTCGTCGAGGGCTGGAACAAGGGCTGGAACAGCAACTGGTT CGGCCATGGCGACGCCTATAGCTTCACCGAAGCCTATCCCGATTTCGACCTCAAAGCCGTCACTGACTATGCGCGCAAGA AAGGCGTGACCTTGATCGGTCATCACGAAACCGGCGGCAATATCGCGGTATATGAGGCACAGCTTGACGATGCGATGAAG CTCTATGGCCAGCTTGGCGTCAGGGCGGTCAAGACCGGCTATGTCGCCGATGCCGGCGGTATCATCGCGCCGGGCGCGAC GCCCGGCAGCAAGGCGATGGAATGGCACGACGGCCAGCGCCAGGTGCAGCATCACCAAAAGGTCGTCGAGACGGCGGCGA AATACAAGGTCGCGGTCAATCCGCACGAACCGGTGAAGGATACGGGGCTTCGCCGCACCTGGCCCAACTGGGTCGCCCGC GAAGGCGCCCGCGGCATGGAATATAATGCCTGGGGCGCCTTCGCCAACAATCCCGACCACGAACCCACGCTCGTCTACAC GCGGATGCTGTCAGGGCCGATGGACTATACGCCAGGGGTGTTCAGCCTGAAGGGGGCCGAGGATGTTCCGATGACCTCGA CCCTCGCGAAGCAGCTCGGCCTCTATCTCGCCATCTATTCGCCGATCCAGATGGCGGCCGACTTTATCGAGAATCTGGAA GCGCACCCGCGCGAGCTTGCATTTGTGAAACAGGTGCCGACCGACTGGGCCGAAAGCCACCTGATCGCGGGCGCGGTCGG CGACTATGCGATCTTCGCGCGCAAGGACCGGAAAAGCGCCGACTGGTATGTCGGCGGCGTCAACGACGGCACCGAACGCA CGCTGACGCTGTCGTTCGATTTCCTCGATCCCGGCAAGACCTATACCGCGACGATCTGGAAGGATGGCGACGGCGCCACC TATCTGACCGACGCGCGCCGCAACATCGCCTATGACACGATCAAGGTGAAAAAGGGCGACACGTACAAGCTCTGGCTTGC CCCCGGCGGCGGCGCGGCAATGCGGGTGACGCCCGGCCGCTAA
Upstream 100 bases:
>100_bases CGCTTGCCGACGGCCGCGCGCCGCTGATCGCGCTGAACGGCGCCGACACCGCACAGTTGCCGCCATGCGGCGCGCTCTGG CTCAAAATGGAAGGATGATC
Downstream 100 bases:
>100_bases GGCGGGCGCGGGCTCGGCCGGACCAGCCCCCTTTTTCGTCATTCCGGCGAAGGCCGGAATCCCGCCCTCGCGCTCCAAGG CAACGGCGAGATTCCGGCCT
Product: alpha-glucosidase
Products: NA
Alternate protein names: Glycoside Hydrolase; Glycoside Hydrolase Family; Alpha-Glucosidase Family Protein; Alpha-Glucosidase Protein; Glycoside Hydrolase Family Protein; Esterase; Alpha-Glucosidase-Like Protein; Glycosyl Hydrolase Family; Alpha-Glucosidase SusB; Secreted Protein
Number of amino acids: Translated: 680; Mature: 680
Protein sequence:
>680_residues MLRLAPLALLAAAAAPAAAQQAPAPVTATSPDRSLVLTVTTDNDARPTWSLSRKGKLLIAPSKLGFLMADRVGLQRGFRI EGSETASADSRWEQPWGERRFVRDQHNELLVRFRQHESWGGHAMNVRFRLFDDGIGFRYELPEQEGLKTAKIADEITEFD IAAEGTAWWIAGGEWNRYEQVYQQTPIDAVSTAHTPITMRLADGTHLAFHEAALVDYAGMWLKRVEGRKFRATLAPSSQG PRVVRDLPFATPWRTIRISDDAAGLVESDLELNLNEPNKLGDVSWVKPMKYIGIWWGMIRGPWSWAEGPNHGATTERTKQ YIDFAAKHGFGGVLVEGWNKGWNSNWFGHGDAYSFTEAYPDFDLKAVTDYARKKGVTLIGHHETGGNIAVYEAQLDDAMK LYGQLGVRAVKTGYVADAGGIIAPGATPGSKAMEWHDGQRQVQHHQKVVETAAKYKVAVNPHEPVKDTGLRRTWPNWVAR EGARGMEYNAWGAFANNPDHEPTLVYTRMLSGPMDYTPGVFSLKGAEDVPMTSTLAKQLGLYLAIYSPIQMAADFIENLE AHPRELAFVKQVPTDWAESHLIAGAVGDYAIFARKDRKSADWYVGGVNDGTERTLTLSFDFLDPGKTYTATIWKDGDGAT YLTDARRNIAYDTIKVKKGDTYKLWLAPGGGAAMRVTPGR
Sequences:
>Translated_680_residues MLRLAPLALLAAAAAPAAAQQAPAPVTATSPDRSLVLTVTTDNDARPTWSLSRKGKLLIAPSKLGFLMADRVGLQRGFRI EGSETASADSRWEQPWGERRFVRDQHNELLVRFRQHESWGGHAMNVRFRLFDDGIGFRYELPEQEGLKTAKIADEITEFD IAAEGTAWWIAGGEWNRYEQVYQQTPIDAVSTAHTPITMRLADGTHLAFHEAALVDYAGMWLKRVEGRKFRATLAPSSQG PRVVRDLPFATPWRTIRISDDAAGLVESDLELNLNEPNKLGDVSWVKPMKYIGIWWGMIRGPWSWAEGPNHGATTERTKQ YIDFAAKHGFGGVLVEGWNKGWNSNWFGHGDAYSFTEAYPDFDLKAVTDYARKKGVTLIGHHETGGNIAVYEAQLDDAMK LYGQLGVRAVKTGYVADAGGIIAPGATPGSKAMEWHDGQRQVQHHQKVVETAAKYKVAVNPHEPVKDTGLRRTWPNWVAR EGARGMEYNAWGAFANNPDHEPTLVYTRMLSGPMDYTPGVFSLKGAEDVPMTSTLAKQLGLYLAIYSPIQMAADFIENLE AHPRELAFVKQVPTDWAESHLIAGAVGDYAIFARKDRKSADWYVGGVNDGTERTLTLSFDFLDPGKTYTATIWKDGDGAT YLTDARRNIAYDTIKVKKGDTYKLWLAPGGGAAMRVTPGR >Mature_680_residues MLRLAPLALLAAAAAPAAAQQAPAPVTATSPDRSLVLTVTTDNDARPTWSLSRKGKLLIAPSKLGFLMADRVGLQRGFRI EGSETASADSRWEQPWGERRFVRDQHNELLVRFRQHESWGGHAMNVRFRLFDDGIGFRYELPEQEGLKTAKIADEITEFD IAAEGTAWWIAGGEWNRYEQVYQQTPIDAVSTAHTPITMRLADGTHLAFHEAALVDYAGMWLKRVEGRKFRATLAPSSQG PRVVRDLPFATPWRTIRISDDAAGLVESDLELNLNEPNKLGDVSWVKPMKYIGIWWGMIRGPWSWAEGPNHGATTERTKQ YIDFAAKHGFGGVLVEGWNKGWNSNWFGHGDAYSFTEAYPDFDLKAVTDYARKKGVTLIGHHETGGNIAVYEAQLDDAMK LYGQLGVRAVKTGYVADAGGIIAPGATPGSKAMEWHDGQRQVQHHQKVVETAAKYKVAVNPHEPVKDTGLRRTWPNWVAR EGARGMEYNAWGAFANNPDHEPTLVYTRMLSGPMDYTPGVFSLKGAEDVPMTSTLAKQLGLYLAIYSPIQMAADFIENLE AHPRELAFVKQVPTDWAESHLIAGAVGDYAIFARKDRKSADWYVGGVNDGTERTLTLSFDFLDPGKTYTATIWKDGDGAT YLTDARRNIAYDTIKVKKGDTYKLWLAPGGGAAMRVTPGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75353; Mature: 75353
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLAPLALLAAAAAPAAAQQAPAPVTATSPDRSLVLTVTTDNDARPTWSLSRKGKLLIA CCEEHHHHHHHHHCCCHHHHCCCCCCEECCCCCEEEEEEEECCCCCCCEEECCCCEEEEE PSKLGFLMADRVGLQRGFRIEGSETASADSRWEQPWGERRFVRDQHNELLVRFRQHESWG CCCCCHHHHHHHHHHCCCEECCCCCCCCCCHHCCCCCCCCHHHHCCHHHHHHHHHCCCCC GHAMNVRFRLFDDGIGFRYELPEQEGLKTAKIADEITEFDIAAEGTAWWIAGGEWNRYEQ CEEEEEEEEEEECCCCEEEECCHHHCCCHHHHHHHHHHHEEEECCCEEEEECCCCHHHHH VYQQTPIDAVSTAHTPITMRLADGTHLAFHEAALVDYAGMWLKRVEGRKFRATLAPSSQG HHHHCCCHHHHCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC PRVVRDLPFATPWRTIRISDDAAGLVESDLELNLNEPNKLGDVSWVKPMKYIGIWWGMIR CCHHHHCCCCCCCEEEEECCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHC GPWSWAEGPNHGATTERTKQYIDFAAKHGFGGVLVEGWNKGWNSNWFGHGDAYSFTEAYP CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCHHHCCC DFDLKAVTDYARKKGVTLIGHHETGGNIAVYEAQLDDAMKLYGQLGVRAVKTGYVADAGG CCCHHHHHHHHHHCCCEEEEEECCCCCEEEEECCHHHHHHHHHHHCCEEEECCCEECCCC IIAPGATPGSKAMEWHDGQRQVQHHQKVVETAAKYKVAVNPHEPVKDTGLRRTWPNWVAR EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCHHCCCCCCCCHHHHH EGARGMEYNAWGAFANNPDHEPTLVYTRMLSGPMDYTPGVFSLKGAEDVPMTSTLAKQLG CCCCCCEECCCCCCCCCCCCCCEEEEEEHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHC LYLAIYSPIQMAADFIENLEAHPRELAFVKQVPTDWAESHLIAGAVGDYAIFARKDRKSA EEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHCCEEEECCCCEEEEEECCCCCC DWYVGGVNDGTERTLTLSFDFLDPGKTYTATIWKDGDGATYLTDARRNIAYDTIKVKKGD CEEEECCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCEEEECCCCCCEEEEEEEECCC TYKLWLAPGGGAAMRVTPGR EEEEEEECCCCCEEEECCCC >Mature Secondary Structure MLRLAPLALLAAAAAPAAAQQAPAPVTATSPDRSLVLTVTTDNDARPTWSLSRKGKLLIA CCEEHHHHHHHHHCCCHHHHCCCCCCEECCCCCEEEEEEEECCCCCCCEEECCCCEEEEE PSKLGFLMADRVGLQRGFRIEGSETASADSRWEQPWGERRFVRDQHNELLVRFRQHESWG CCCCCHHHHHHHHHHCCCEECCCCCCCCCCHHCCCCCCCCHHHHCCHHHHHHHHHCCCCC GHAMNVRFRLFDDGIGFRYELPEQEGLKTAKIADEITEFDIAAEGTAWWIAGGEWNRYEQ CEEEEEEEEEEECCCCEEEECCHHHCCCHHHHHHHHHHHEEEECCCEEEEECCCCHHHHH VYQQTPIDAVSTAHTPITMRLADGTHLAFHEAALVDYAGMWLKRVEGRKFRATLAPSSQG HHHHCCCHHHHCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC PRVVRDLPFATPWRTIRISDDAAGLVESDLELNLNEPNKLGDVSWVKPMKYIGIWWGMIR CCHHHHCCCCCCCEEEEECCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHC GPWSWAEGPNHGATTERTKQYIDFAAKHGFGGVLVEGWNKGWNSNWFGHGDAYSFTEAYP CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCHHHCCC DFDLKAVTDYARKKGVTLIGHHETGGNIAVYEAQLDDAMKLYGQLGVRAVKTGYVADAGG CCCHHHHHHHHHHCCCEEEEEECCCCCEEEEECCHHHHHHHHHHHCCEEEECCCEECCCC IIAPGATPGSKAMEWHDGQRQVQHHQKVVETAAKYKVAVNPHEPVKDTGLRRTWPNWVAR EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCHHCCCCCCCCHHHHH EGARGMEYNAWGAFANNPDHEPTLVYTRMLSGPMDYTPGVFSLKGAEDVPMTSTLAKQLG CCCCCCEECCCCCCCCCCCCCCEEEEEEHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHC LYLAIYSPIQMAADFIENLEAHPRELAFVKQVPTDWAESHLIAGAVGDYAIFARKDRKSA EEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHCCEEEECCCCEEEEEECCCCCC DWYVGGVNDGTERTLTLSFDFLDPGKTYTATIWKDGDGATYLTDARRNIAYDTIKVKKGD CEEEECCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCEEEECCCCCCEEEEEEEECCC TYKLWLAPGGGAAMRVTPGR EEEEEEECCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA