Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485647

Identifier: 103485647

GI number: 103485647

Start: 146162

End: 146833

Strand: Reverse

Name: 103485647

Synonym: Sala_0151

Alternate gene names: NA

Gene position: 146833-146162 (Counterclockwise)

Preceding gene: 103485648

Following gene: 103485643

Centisome position: 4.39

GC content: 65.62

Gene sequence:

>672_bases
ATGATGACGACCAAGGCCAGTCCCACCGCGGGATGGAAAAAGATCGCCGCGCAGGCGCTGTTCGGCGCCGTCGTCGGTGC
GGCTGGCATGTTTGCGGCGCTGTCGCTGCTCGAAGGCGGCGATGGCAACGACTGGCCCGGATCGATCATCATCCTTCTGG
GCGTGGGCTTCATCTACACGCTGATGGGCGCCTTCGTCGGGATCGGCACGCTCGCGCCACGGCTTGTCGGCCAGCGCCTG
CTCAATGTCGCCGACGCCGAAGAAATCGTCGAAGAACGCTCGCACCTCGGCGGAAGTGCCATCGGGTGTCTCGCGCTCGG
CGCCGGGTTGATGCTCCTCGCCTATGCGACGGGTAGCGAAGCGGTGGGAACAACGCCGCGCGTGAGTGTTGCGGCGGCAT
TCTGGATCCTGGTCGCGGTGCTCGGCCTGTTTACGCTGGTGTCGGTCTGGATGTGGCGCGATTTCGACGAGCTGTGGCGC
CAGCTGACGCTGGAGGTCACGGCGATCACCGGCAATTTGATGATGTTCGTCGCAGTTCTGTGGGGCGGCGCGGCCACAGC
CGACCTCATCGCCGGTCCGCACCCGATCGACCTTGTATCGCTGTCGTTCGGGCTGATGCTGCTCGGCTGTTTTGTCGCAA
CCGCGCGGCGGGGCATGATGGCGCCGCGATAG

Upstream 100 bases:

>100_bases
AAATATGACCCCAGCCTGCCGCTGGCGCTGCGCATGGCGCGCCTCTTCGCGCTCGAAGTGTGCGAACTGTTCATCGATCA
CTGGAACCCGAAGGAGTAGG

Downstream 100 bases:

>100_bases
TGCCCCCCCGGTTCAGTCAGCCCCGCCGACATCCGCTGCGGCCGCTTCGGGCACCGGAGTAACTTGCGCATAGACGAGCT
GCCATGCGCCATCGCGCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MMTTKASPTAGWKKIAAQALFGAVVGAAGMFAALSLLEGGDGNDWPGSIIILLGVGFIYTLMGAFVGIGTLAPRLVGQRL
LNVADAEEIVEERSHLGGSAIGCLALGAGLMLLAYATGSEAVGTTPRVSVAAAFWILVAVLGLFTLVSVWMWRDFDELWR
QLTLEVTAITGNLMMFVAVLWGGAATADLIAGPHPIDLVSLSFGLMLLGCFVATARRGMMAPR

Sequences:

>Translated_223_residues
MMTTKASPTAGWKKIAAQALFGAVVGAAGMFAALSLLEGGDGNDWPGSIIILLGVGFIYTLMGAFVGIGTLAPRLVGQRL
LNVADAEEIVEERSHLGGSAIGCLALGAGLMLLAYATGSEAVGTTPRVSVAAAFWILVAVLGLFTLVSVWMWRDFDELWR
QLTLEVTAITGNLMMFVAVLWGGAATADLIAGPHPIDLVSLSFGLMLLGCFVATARRGMMAPR
>Mature_223_residues
MMTTKASPTAGWKKIAAQALFGAVVGAAGMFAALSLLEGGDGNDWPGSIIILLGVGFIYTLMGAFVGIGTLAPRLVGQRL
LNVADAEEIVEERSHLGGSAIGCLALGAGLMLLAYATGSEAVGTTPRVSVAAAFWILVAVLGLFTLVSVWMWRDFDELWR
QLTLEVTAITGNLMMFVAVLWGGAATADLIAGPHPIDLVSLSFGLMLLGCFVATARRGMMAPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23228; Mature: 23228

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTTKASPTAGWKKIAAQALFGAVVGAAGMFAALSLLEGGDGNDWPGSIIILLGVGFIYT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
LMGAFVGIGTLAPRLVGQRLLNVADAEEIVEERSHLGGSAIGCLALGAGLMLLAYATGSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
AVGTTPRVSVAAAFWILVAVLGLFTLVSVWMWRDFDELWRQLTLEVTAITGNLMMFVAVL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
WGGAATADLIAGPHPIDLVSLSFGLMLLGCFVATARRGMMAPR
HCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MMTTKASPTAGWKKIAAQALFGAVVGAAGMFAALSLLEGGDGNDWPGSIIILLGVGFIYT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
LMGAFVGIGTLAPRLVGQRLLNVADAEEIVEERSHLGGSAIGCLALGAGLMLLAYATGSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
AVGTTPRVSVAAAFWILVAVLGLFTLVSVWMWRDFDELWRQLTLEVTAITGNLMMFVAVL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
WGGAATADLIAGPHPIDLVSLSFGLMLLGCFVATARRGMMAPR
HCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA