Click here to switch to the map view.

The map label for this gene is 103485648

Identifier: 103485648

GI number: 103485648

Start: 146835

End: 147116

Strand: Reverse

Name: 103485648

Synonym: Sala_0152

Alternate gene names: NA

Gene position: 147116-146835 (Counterclockwise)

Preceding gene: 103485652

Following gene: 103485647

Centisome position: 4.4

GC content: 60.28

Gene sequence:

>282_bases
ATGGAAACCTGTAAAGAGTGTTTGACAGACGAAACAGCCAACTGTAAAGAGCTCTTGACAGGCACGGGAGCAGCTGTGGA
AAATCGGGTGCGCGAATATCGCGAGGCGGCGGGATGGAGCCAGGGCGAGCTGGCGCGGCGGCTCGGCGTGTCGCGTCAGA
CGATCAACGCCGTCGAAACCGACAAATATGACCCCAGCCTGCCGCTGGCGCTGCGCATGGCGCGCCTCTTCGCGCTCGAA
GTGTGCGAACTGTTCATCGATCACTGGAACCCGAAGGAGTAG

Upstream 100 bases:

>100_bases
CGATCAGGATCAGGTGGCGGGTCATGGCCAGCCCTCCCTTGAAAGGCCCGCCAGGGCATGAACCGCACCGTTTGGCAAAG
GCGCAGGTACGGTACGCGTC

Downstream 100 bases:

>100_bases
GATGATGACGACCAAGGCCAGTCCCACCGCGGGATGGAAAAAGATCGCCGCGCAGGCGCTGTTCGGCGCCGTCGTCGGTG
CGGCTGGCATGTTTGCGGCG

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator XRE Family; HTH-Type Transcriptional Regulator; Transcriptional Regulator Xre Family; Regulatory Protein; Cro/CI Family Transcriptional Regulator; Conserved Domain Protein; Transcriptional Regulator Cro/CI Family Protein; Transcriptional Regulator Cro/CI Family; PbsX Family Transcriptional Regulator; Transcriptional Regulator Protein-Like Protein

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
METCKECLTDETANCKELLTGTGAAVENRVREYREAAGWSQGELARRLGVSRQTINAVETDKYDPSLPLALRMARLFALE
VCELFIDHWNPKE

Sequences:

>Translated_93_residues
METCKECLTDETANCKELLTGTGAAVENRVREYREAAGWSQGELARRLGVSRQTINAVETDKYDPSLPLALRMARLFALE
VCELFIDHWNPKE
>Mature_93_residues
METCKECLTDETANCKELLTGTGAAVENRVREYREAAGWSQGELARRLGVSRQTINAVETDKYDPSLPLALRMARLFALE
VCELFIDHWNPKE

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10531; Mature: 10531

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METCKECLTDETANCKELLTGTGAAVENRVREYREAAGWSQGELARRLGVSRQTINAVET
CCHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHC
DKYDPSLPLALRMARLFALEVCELFIDHWNPKE
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
METCKECLTDETANCKELLTGTGAAVENRVREYREAAGWSQGELARRLGVSRQTINAVET
CCHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHC
DKYDPSLPLALRMARLFALEVCELFIDHWNPKE
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA