Click here to switch to the map view.

The map label for this gene is bioC [C]

Identifier: 103485642

GI number: 103485642

Start: 141909

End: 142535

Strand: Direct

Name: bioC [C]

Synonym: Sala_0146

Alternate gene names: 103485642

Gene position: 141909-142535 (Clockwise)

Preceding gene: 103485639

Following gene: 103485644

Centisome position: 4.24

GC content: 68.42

Gene sequence:

>627_bases
ATGGCAAGCTGGTGGGAGCGGCACGGCGTCCCGCGCCTGATCAAATGCGCCTGTTCGCAGGGGCAGATCATGAAGCTGAG
GAGCCGGATCGTGCCGTATGCGCGCGGCCATGTGCTCGAACTCGGCTGCGGCGGCGGGATCAACATGGCATTTTACCGTC
CGGAACAGGTCGAGAGTTTCTCCGGGATCGACCCGTCGCCCGAACTGCTGGCGATGAGCCGCGCGGCGGCGGCCGGGCGC
GGGATGGCGGCCGACATTCGGGGCGGCGTCGGCGAAGCGATGCCGTTCGACAGCGGGCAGTTCGATACCGTCGTCACTAC
CTTCACCCTCTGTTCGGTCGCCGATCAGGCCGCGGTGCTCGCCGAAATCCGCCGCGTGCTGAAACCGGGCGGGACCGCGC
TATTCCTCGAACATGGCGGCGCGCCCGATGCCGGGGTCGCGAAATGGCAGCGGCGTATCGAGCCGGTCTGGAAACGCATC
GGCGGCAATTGCCACCTGACGCGCCCGATCGGCGACGCCTATGCCGCGGCAGGCTTTGCGGTCGAGCGACAGGGCGCCGC
CTATATGCCGAAAACGCCGCGCCCGTTTGGCTGGGTCGAATATGGCGCGGCGCGGGTCGCGGGGTAG

Upstream 100 bases:

>100_bases
CTCGACACGAACGGGCAGAAAGGAATCGCGGCAGGCACAAATGGGCGTTGTAACGCGCGCTGGCAAGAGACAGGCGGCGC
GCGAAGAGGGAGAGGCGGTG

Downstream 100 bases:

>100_bases
GCGGGGGCGGGAAACGTCTGGGGCCGACCAGAAGCTGCCATAGGATCCTCCCCATCGCAAGTCGATGGGGAGGATTTTTA
AACGTCCGCTCCCCACCCCA

Product: methyltransferase type 11

Products: NA

Alternate protein names: Methyltransferase; Ubiquinone/Menaquinone Biosynthesis Methyltransferase; SAM-Dependent Methyltransferase; UbiE/COQ5 Family Methlytransferase; Methyltransferase UbiE/COQ5 Family; Phosphatidylethanolamine N-Methyltransferase; Methyltransferase Domain Family; SAM-Dependent Methyltransferase UbiE/COQ5 Family; Phospholipid Methyltransferase; Ubiquinone/Menaquinone Biosynthesis Methyltransferase UbiE; Methylase Involved In Ubiquinone/Menaquinone Biosynthesis; UbiE Ubiquinone/Menaquinone Biosynthesis Methyltransferase; Generic Methyltransferase; Ubiquinone/Menaquinone Biosynthesis Methyl Transferase; Methyltransferase Domain Family Protein; UbiE/COQ5 Methyltransferase; Sam Dependent Methyltransferase

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MASWWERHGVPRLIKCACSQGQIMKLRSRIVPYARGHVLELGCGGGINMAFYRPEQVESFSGIDPSPELLAMSRAAAAGR
GMAADIRGGVGEAMPFDSGQFDTVVTTFTLCSVADQAAVLAEIRRVLKPGGTALFLEHGGAPDAGVAKWQRRIEPVWKRI
GGNCHLTRPIGDAYAAAGFAVERQGAAYMPKTPRPFGWVEYGAARVAG

Sequences:

>Translated_208_residues
MASWWERHGVPRLIKCACSQGQIMKLRSRIVPYARGHVLELGCGGGINMAFYRPEQVESFSGIDPSPELLAMSRAAAAGR
GMAADIRGGVGEAMPFDSGQFDTVVTTFTLCSVADQAAVLAEIRRVLKPGGTALFLEHGGAPDAGVAKWQRRIEPVWKRI
GGNCHLTRPIGDAYAAAGFAVERQGAAYMPKTPRPFGWVEYGAARVAG
>Mature_207_residues
ASWWERHGVPRLIKCACSQGQIMKLRSRIVPYARGHVLELGCGGGINMAFYRPEQVESFSGIDPSPELLAMSRAAAAGRG
MAADIRGGVGEAMPFDSGQFDTVVTTFTLCSVADQAAVLAEIRRVLKPGGTALFLEHGGAPDAGVAKWQRRIEPVWKRIG
GNCHLTRPIGDAYAAAGFAVERQGAAYMPKTPRPFGWVEYGAARVAG

Specific function: Bioc Is Involved In An Early, But Chemically Unexplored, Step In The Conversion Of Pimelic Acid To Biotin. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI164663805, Length=169, Percent_Identity=36.6863905325444, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI89145417, Length=153, Percent_Identity=34.640522875817, Blast_Score=83, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22260; Mature: 22129

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: PS01184 UBIE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASWWERHGVPRLIKCACSQGQIMKLRSRIVPYARGHVLELGCGGGINMAFYRPEQVESF
CCCCHHHCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCEEEECHHHHHHC
SGIDPSPELLAMSRAAAAGRGMAADIRGGVGEAMPFDSGQFDTVVTTFTLCSVADQAAVL
CCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
AEIRRVLKPGGTALFLEHGGAPDAGVAKWQRRIEPVWKRIGGNCHLTRPIGDAYAAAGFA
HHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHCCE
VERQGAAYMPKTPRPFGWVEYGAARVAG
EECCCCCCCCCCCCCCCHHHHCCHHCCC
>Mature Secondary Structure 
ASWWERHGVPRLIKCACSQGQIMKLRSRIVPYARGHVLELGCGGGINMAFYRPEQVESF
CCCHHHCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCEEEECHHHHHHC
SGIDPSPELLAMSRAAAAGRGMAADIRGGVGEAMPFDSGQFDTVVTTFTLCSVADQAAVL
CCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
AEIRRVLKPGGTALFLEHGGAPDAGVAKWQRRIEPVWKRIGGNCHLTRPIGDAYAAAGFA
HHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHCCE
VERQGAAYMPKTPRPFGWVEYGAARVAG
EECCCCCCCCCCCCCCCHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA