| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103485639
Identifier: 103485639
GI number: 103485639
Start: 138781
End: 139119
Strand: Direct
Name: 103485639
Synonym: Sala_0143
Alternate gene names: NA
Gene position: 138781-139119 (Clockwise)
Preceding gene: 103485638
Following gene: 103485642
Centisome position: 4.15
GC content: 55.75
Gene sequence:
>339_bases TTGAGCGGAGAGGGTGATCTGAAGGTCGGAGGAGAAAATAGAATGTTTATCGTTGAACTAACTGCTGTAGTCATTGCCGC GTATGTCACGGCCCTCGTTATGCGCGAAATGCCGCGCCTGTTTGCATTGCTCGTCGTCCAGATCGCTGACCGGCTGTCGG GAGCTAGGCGCACTCACATCGTGGAAGCACTTAACGGTCGCCAAGTCCCAGTGACTTGGGCGGCAACGTCGGAAGATCGC AATTTGTTGCACGCCGCCATGCGCTCCACGATGCGTGTGACGACGTTTCGCTCGCTCTATCCTCTGAACCGCTGGAATCG GCTGTTAGGCCCATTTTGA
Upstream 100 bases:
>100_bases ACCGGTAACGCCCGGTGCCGAACACCCTGAATATCGCATTGCCTGTTCTGGCTTCAGAAGGATCTGATAGCGAAGTCTTC AAACCAGAACAGGAGAGAAA
Downstream 100 bases:
>100_bases CTGTGACAATTTCCCAGAATGATTTGCATGAGCTTCGCCTCGCCCGCCAAACACGGCATTCTTTAAATTCGAACCGTGCG ACGTCGCGGAGCCAGTGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MSGEGDLKVGGENRMFIVELTAVVIAAYVTALVMREMPRLFALLVVQIADRLSGARRTHIVEALNGRQVPVTWAATSEDR NLLHAAMRSTMRVTTFRSLYPLNRWNRLLGPF
Sequences:
>Translated_112_residues MSGEGDLKVGGENRMFIVELTAVVIAAYVTALVMREMPRLFALLVVQIADRLSGARRTHIVEALNGRQVPVTWAATSEDR NLLHAAMRSTMRVTTFRSLYPLNRWNRLLGPF >Mature_111_residues SGEGDLKVGGENRMFIVELTAVVIAAYVTALVMREMPRLFALLVVQIADRLSGARRTHIVEALNGRQVPVTWAATSEDRN LLHAAMRSTMRVTTFRSLYPLNRWNRLLGPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12584; Mature: 12453
Theoretical pI: Translated: 11.52; Mature: 11.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGEGDLKVGGENRMFIVELTAVVIAAYVTALVMREMPRLFALLVVQIADRLSGARRTHI CCCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH VEALNGRQVPVTWAATSEDRNLLHAAMRSTMRVTTFRSLYPLNRWNRLLGPF HHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC >Mature Secondary Structure SGEGDLKVGGENRMFIVELTAVVIAAYVTALVMREMPRLFALLVVQIADRLSGARRTHI CCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH VEALNGRQVPVTWAATSEDRNLLHAAMRSTMRVTTFRSLYPLNRWNRLLGPF HHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA