| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103485631
Identifier: 103485631
GI number: 103485631
Start: 129305
End: 129706
Strand: Direct
Name: 103485631
Synonym: Sala_0135
Alternate gene names: NA
Gene position: 129305-129706 (Clockwise)
Preceding gene: 103485629
Following gene: 103485632
Centisome position: 3.87
GC content: 54.23
Gene sequence:
>402_bases ATGGGTAGGGCATTAGAACCAGTGCTAAGAGCGCCCGCTCCGCTACCGCCCGGACCGACGGTTCTGCATTCCCTTTATAA TGTCTCCAAGAACCAAGCGATCTTGGTGATCGAGAGATTTCAGATCACGGTACATGACGAGCAAATGCTCGTCATCGCTA TCTTCGTCCGGCTTCTCCCCGACAAGGCTTGCGATAGATACCTCAAAATGATCGGCGAGCTTTCGGACAAGTTCGATCGA CGGATTCTTGGCGGTGCCTTTCTCAAGCTCCCAGATATGCGCCTTCGACGCACCGATGGCGTCAGCCACTTCCTGAAGCG ATTGCTGCTTTGCCGTGCGAAGGTTCTGCAGCCTCATCGCCAACGACATGTCCATGACCTCCCTCGACACAACCTAACAT GA
Upstream 100 bases:
>100_bases AAGACCGGCTGACAGAACCGGCAATAGCCGAATCGACCAAAGCGCCGACCGCGCCGAACTCCTTTGCTGCGGACGTGGCG CCGGTGACGACCACGACGGT
Downstream 100 bases:
>100_bases GAGCAACGCCATAGAAATCAACGAGCGTTCGGTCAAACGAACGACTTCGTCCGACCGATTGACTCTAGTCGTTGTCTGAT ATAACGAACGATAACGTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MGRALEPVLRAPAPLPPGPTVLHSLYNVSKNQAILVIERFQITVHDEQMLVIAIFVRLLPDKACDRYLKMIGELSDKFDR RILGGAFLKLPDMRLRRTDGVSHFLKRLLLCRAKVLQPHRQRHVHDLPRHNLT
Sequences:
>Translated_133_residues MGRALEPVLRAPAPLPPGPTVLHSLYNVSKNQAILVIERFQITVHDEQMLVIAIFVRLLPDKACDRYLKMIGELSDKFDR RILGGAFLKLPDMRLRRTDGVSHFLKRLLLCRAKVLQPHRQRHVHDLPRHNLT >Mature_132_residues GRALEPVLRAPAPLPPGPTVLHSLYNVSKNQAILVIERFQITVHDEQMLVIAIFVRLLPDKACDRYLKMIGELSDKFDRR ILGGAFLKLPDMRLRRTDGVSHFLKRLLLCRAKVLQPHRQRHVHDLPRHNLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15340; Mature: 15208
Theoretical pI: Translated: 11.09; Mature: 11.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRALEPVLRAPAPLPPGPTVLHSLYNVSKNQAILVIERFQITVHDEQMLVIAIFVRLLP CCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHCC DKACDRYLKMIGELSDKFDRRILGGAFLKLPDMRLRRTDGVSHFLKRLLLCRAKVLQPHR CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHCHHH QRHVHDLPRHNLT HHHHHHCCCCCCC >Mature Secondary Structure GRALEPVLRAPAPLPPGPTVLHSLYNVSKNQAILVIERFQITVHDEQMLVIAIFVRLLP CCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHCC DKACDRYLKMIGELSDKFDRRILGGAFLKLPDMRLRRTDGVSHFLKRLLLCRAKVLQPHR CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHCHHH QRHVHDLPRHNLT HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA