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The map label for this gene is 103485627

Identifier: 103485627

GI number: 103485627

Start: 125745

End: 126734

Strand: Reverse

Name: 103485627

Synonym: Sala_0131

Alternate gene names: NA

Gene position: 126734-125745 (Counterclockwise)

Preceding gene: 103485628

Following gene: 103485626

Centisome position: 3.79

GC content: 58.18

Gene sequence:

>990_bases
ATGCTCAGTGCTCATAGGAACGACGATTTGCTGACCGGGAAGACCATTGCGGTCATCTGCGCCGTCGCGCTGTTCACCAC
AGCCTGCGGCAAAAAGAGCGATGCGGGTGCGCCCGACGATACTTACGCGTCGCTGGTCAACAAAGATGGGACGATCTCCT
TTCCCGCAGACTTCCCCGAGAGTTACATGTTCATTGGCACCTGGTCGGTCACGGCGCCCTCGGGAGAGGCAGAAATTCAT
TCCGTCTATTCCCGACCGGCGGATGTTGACGCCTTTCGGAGCGCGGGGAAATTTCCTGACGGCGCAGTCTTGATCAAGGA
AGTCACAATTGCGAAGAGCGCCGACCTCGTCACAGGCCGCGCATCCTGGGCCGGTGATCGCAAGATTTGGTTCCTCATGG
TGAAGGATCGCAAGGGACGGTTCGCGGGCAACCCCCTCTGGGGTGACGGGTGGGGCTGGGCGCAATTCGACCCGACCGAC
ACCAAGAAGCAAACGGCGACGAATTACCAAACCGACTGCAAATCATGCCACATTCCGGCCAAGTCATCCGAATGGGTTTA
CACCTATGCCTACCCAGCGCTGGGTGAGAAAGGCCAAGTCGGCCTGCCGGTGAATTCACATAGAGGTAACCCGCCCGGGA
TAGTTCCCGCCGTCGCAACGCAGGCCATGACGAGCGGCGTGGCTTCAGGCAAGATGGCTTTCGACAAGACTTGCAGGGCA
TGCCACTCCATAAACCCTGGTGGTGCCGGCATCGGACCAACGCTGGCTGGCGTCGTCGGCCGCAAGGCGGGCACCGTGCC
AAACTTTGATTATTCGGACCAGATACGGAATTCCGGCATAACCTGGACAGCCGACAATATTGACAAACATATCGAGGCGC
CAAAATCCTTCATTCCCGGGAATCGCATGGGAAATCTCTTCCCCAACGGGATCAAGGATCCGGGTCAGCGCCGCGATATC
ATCGTCTATCTGAAAAGCGTCGCACAGTAG

Upstream 100 bases:

>100_bases
CAAGCCCATACTCGATCCGCTACCGCTCCCCCGCGGTTGACATGACGCTGCTGCAGCCATCGGCGTCTGCGGCGCGACAG
GCGATGCAAGAGCAGCGGCC

Downstream 100 bases:

>100_bases
TCGACGGCGGCTTCCCGCTCGCGAGCGGCGGTAAGACGCATGAGCCACTGAAGGTGGCTAGTCAGATTGATGCTTGAGGC
ACAAAACAACTCAACGGACT

Product: cytochrome c, class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MLSAHRNDDLLTGKTIAVICAVALFTTACGKKSDAGAPDDTYASLVNKDGTISFPADFPESYMFIGTWSVTAPSGEAEIH
SVYSRPADVDAFRSAGKFPDGAVLIKEVTIAKSADLVTGRASWAGDRKIWFLMVKDRKGRFAGNPLWGDGWGWAQFDPTD
TKKQTATNYQTDCKSCHIPAKSSEWVYTYAYPALGEKGQVGLPVNSHRGNPPGIVPAVATQAMTSGVASGKMAFDKTCRA
CHSINPGGAGIGPTLAGVVGRKAGTVPNFDYSDQIRNSGITWTADNIDKHIEAPKSFIPGNRMGNLFPNGIKDPGQRRDI
IVYLKSVAQ

Sequences:

>Translated_329_residues
MLSAHRNDDLLTGKTIAVICAVALFTTACGKKSDAGAPDDTYASLVNKDGTISFPADFPESYMFIGTWSVTAPSGEAEIH
SVYSRPADVDAFRSAGKFPDGAVLIKEVTIAKSADLVTGRASWAGDRKIWFLMVKDRKGRFAGNPLWGDGWGWAQFDPTD
TKKQTATNYQTDCKSCHIPAKSSEWVYTYAYPALGEKGQVGLPVNSHRGNPPGIVPAVATQAMTSGVASGKMAFDKTCRA
CHSINPGGAGIGPTLAGVVGRKAGTVPNFDYSDQIRNSGITWTADNIDKHIEAPKSFIPGNRMGNLFPNGIKDPGQRRDI
IVYLKSVAQ
>Mature_329_residues
MLSAHRNDDLLTGKTIAVICAVALFTTACGKKSDAGAPDDTYASLVNKDGTISFPADFPESYMFIGTWSVTAPSGEAEIH
SVYSRPADVDAFRSAGKFPDGAVLIKEVTIAKSADLVTGRASWAGDRKIWFLMVKDRKGRFAGNPLWGDGWGWAQFDPTD
TKKQTATNYQTDCKSCHIPAKSSEWVYTYAYPALGEKGQVGLPVNSHRGNPPGIVPAVATQAMTSGVASGKMAFDKTCRA
CHSINPGGAGIGPTLAGVVGRKAGTVPNFDYSDQIRNSGITWTADNIDKHIEAPKSFIPGNRMGNLFPNGIKDPGQRRDI
IVYLKSVAQ

Specific function: Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

Organism=Homo sapiens, GI11128019, Length=100, Percent_Identity=41, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17539604, Length=96, Percent_Identity=38.5416666666667, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17566554, Length=99, Percent_Identity=37.3737373737374, Blast_Score=77, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6320796, Length=101, Percent_Identity=33.6633663366337, Blast_Score=74, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6322508, Length=111, Percent_Identity=29.7297297297297, Blast_Score=69, Evalue=8e-13,
Organism=Drosophila melanogaster, GI17137228, Length=104, Percent_Identity=41.3461538461538, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI17137204, Length=106, Percent_Identity=43.3962264150943, Blast_Score=83, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 35166; Mature: 35166

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC ; PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSAHRNDDLLTGKTIAVICAVALFTTACGKKSDAGAPDDTYASLVNKDGTISFPADFPE
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEECCCCCCC
SYMFIGTWSVTAPSGEAEIHSVYSRPADVDAFRSAGKFPDGAVLIKEVTIAKSADLVTGR
CEEEEEEEEEECCCCCHHHHHHHCCCCCHHHHHHCCCCCCCEEEEEEEEECCCCCEEECC
ASWAGDRKIWFLMVKDRKGRFAGNPLWGDGWGWAQFDPTDTKKQTATNYQTDCKSCHIPA
CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHCCCCC
KSSEWVYTYAYPALGEKGQVGLPVNSHRGNPPGIVPAVATQAMTSGVASGKMAFDKTCRA
CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
CHSINPGGAGIGPTLAGVVGRKAGTVPNFDYSDQIRNSGITWTADNIDKHIEAPKSFIPG
HHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCCEEECCCHHHHHHCCHHHCCC
NRMGNLFPNGIKDPGQRRDIIVYLKSVAQ
CCCCCCCCCCCCCCCCCCCEEEEEHHHCC
>Mature Secondary Structure
MLSAHRNDDLLTGKTIAVICAVALFTTACGKKSDAGAPDDTYASLVNKDGTISFPADFPE
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEECCCCCCC
SYMFIGTWSVTAPSGEAEIHSVYSRPADVDAFRSAGKFPDGAVLIKEVTIAKSADLVTGR
CEEEEEEEEEECCCCCHHHHHHHCCCCCHHHHHHCCCCCCCEEEEEEEEECCCCCEEECC
ASWAGDRKIWFLMVKDRKGRFAGNPLWGDGWGWAQFDPTDTKKQTATNYQTDCKSCHIPA
CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHCCCCC
KSSEWVYTYAYPALGEKGQVGLPVNSHRGNPPGIVPAVATQAMTSGVASGKMAFDKTCRA
CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
CHSINPGGAGIGPTLAGVVGRKAGTVPNFDYSDQIRNSGITWTADNIDKHIEAPKSFIPG
HHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCCEEECCCHHHHHHCCHHHCCC
NRMGNLFPNGIKDPGQRRDIIVYLKSVAQ
CCCCCCCCCCCCCCCCCCCEEEEEHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 221822 [H]