Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485608

Identifier: 103485608

GI number: 103485608

Start: 109889

End: 110170

Strand: Direct

Name: 103485608

Synonym: Sala_0111

Alternate gene names: NA

Gene position: 109889-110170 (Clockwise)

Preceding gene: 103485607

Following gene: 103485609

Centisome position: 3.29

GC content: 57.8

Gene sequence:

>282_bases
TTGGTCTCAGCAGTTTGGAACGACACCACCATCGCCGCAAGCGACGAGACAATCGTCGTCGAGGGAAACCACTATTTCCC
ACCTTCCGCGGTCAATCAGGAGCTCCTTGAAGCGAGCGCACACACTTCTGTCTGCCCGATCAAGGGCACCGCGAGATACT
TCCATATCCGCGTAGGCAGCGCGCTCAACGCGGACGCGGCTTGGTCATATCCCGATCCGAATCCGGTTGCGGAAGCCATC
CGGGATCACATCGCTTTCTGGAAAGGCGTAGAGGTTGGATAG

Upstream 100 bases:

>100_bases
TGCGCCGACGGCGGCCAAGGCACCGTCGCACTCCTCGAACGCCCCTGATTCACGGGCCGCTGCGAACGCCGTGCCATTGA
CAATATGAGAGGATATTCCG

Downstream 100 bases:

>100_bases
CAGCCAAGGCGCAGCGGGCCTTCGCTGATGGCTGTGTCGCTTCATGCGCGCATCCTTGATCATCTCGCGCGGGTAATTGG
CGATCTGCAGGTGGCGGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MVSAVWNDTTIAASDETIVVEGNHYFPPSAVNQELLEASAHTSVCPIKGTARYFHIRVGSALNADAAWSYPDPNPVAEAI
RDHIAFWKGVEVG

Sequences:

>Translated_93_residues
MVSAVWNDTTIAASDETIVVEGNHYFPPSAVNQELLEASAHTSVCPIKGTARYFHIRVGSALNADAAWSYPDPNPVAEAI
RDHIAFWKGVEVG
>Mature_93_residues
MVSAVWNDTTIAASDETIVVEGNHYFPPSAVNQELLEASAHTSVCPIKGTARYFHIRVGSALNADAAWSYPDPNPVAEAI
RDHIAFWKGVEVG

Specific function: Unknown

COG id: COG2343

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10052; Mature: 10052

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSAVWNDTTIAASDETIVVEGNHYFPPSAVNQELLEASAHTSVCPIKGTARYFHIRVGS
CCCCCCCCEEEECCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECC
ALNADAAWSYPDPNPVAEAIRDHIAFWKGVEVG
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVSAVWNDTTIAASDETIVVEGNHYFPPSAVNQELLEASAHTSVCPIKGTARYFHIRVGS
CCCCCCCCEEEECCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECC
ALNADAAWSYPDPNPVAEAIRDHIAFWKGVEVG
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA