Click here to switch to the map view.

The map label for this gene is argS [H]

Identifier: 103485609

GI number: 103485609

Start: 110198

End: 111940

Strand: Direct

Name: argS [H]

Synonym: Sala_0112

Alternate gene names: 103485609

Gene position: 110198-111940 (Clockwise)

Preceding gene: 103485608

Following gene: 103485610

Centisome position: 3.29

GC content: 63.57

Gene sequence:

>1743_bases
ATGGCTGTGTCGCTTCATGCGCGCATCCTTGATCATCTCGCGCGGGTAATTGGCGATCTGCAGGTGGCGGGGGACGTTCC
TGCGGGCCTCGACCGGGCGGGGCTGACCGTGGAGCGTCCGCACGACCCGGCGCATGGCGATCTGTCGACCAACGCGGCGA
TGGTCCTGGCAAAACTTACCGGCACGCATCCGCGCCAACTCGCTGAGAAGTTGGCGGGCCGGTTGGCCATGTTGGAGGAT
GTTGCAGACGTGGCCGTCGCTGGCCCGGGCTTTGTAAATATCCGGCTGACCGACCAGGCCTGGCAAAACGAGCTGGCGGT
GATTGCGGACCAGAAGGACCGCTACGGCATGTCGCCCGTCGGCGCGGGCAAGACGGTGAATATAGAGTTTGTCTCGGCCA
ACCCGACCGGTCCGATGCATATGGGGCACTGCCGAGGGGCAGTGGTCGGAGATGCGCTCGCCAACCTGCTCGCTTTCACC
GGCCATCGCGTCATCCGCGAATATTATATCAATGATGCCGGCGGGCAGGTCGATATTCTCGCTCGCTCGGCACACCAGAG
ATATCGCGAGGCGTTGGGCGAGAGCCTCGGCGAGATAGCGGAAGGTCTATACCCGGGCGATTATCTGAAGCCGGTCGGGG
AGGCGCTGGCCGCCGATTTTGGGGGCCGCTATGCCGACGCCCCGGAGACGGACTGGCTCGCAATCTTTCGTGCGCGGACC
GTTGCCGCGATGATGGAGACGATCCGCGAAGATCTGGCGCTGCTCGGCATAAGTCACGACCGCTTCGCGTCGGAGGCGGA
CCTCGTCGCTGCCGGAAAGCCGGATGATGCCGAGGCCTGGCTGCGCGAGCGCGATCTTGTCTATGACGGCGTTCTCGAAC
CTCCGAAGGGTGAAGTCTCCAAGGACTGGGAGCCGATCGCGCTGCCGCTGTTCCGGTCGACGAAATTTGGCGATGACCAG
GACCGTCCTATCCGTAAACCGGATGGGAGCTGGACCTATTTCGGCGTGGATCTGGCCTATCATTTCGAGAAGGCGCGCGA
TGCCGACGAACTGATCGACATCTGGGGCGCCGATCATGCCGGGACCGTGATGCGCATCGTTGCCGCCGCCGAAGCTCTAA
CCGAAGGCAGGAAGCGGTTCGACGTCAAGCTGGTGCAGATCGTGCGGCTGCTGCGCGCGGGTGAGCCGGTCAAGATGTCC
AAGCGCGCAGGCAATTTCGTCACGCTGGCCGATGTCATTCGAGAAGTCGGAAAGGACGTCGTTCGCTTCATGATGCTGAC
CCGCAAAGCGGAAGCGTCCATGGACTTCGACTTTGCGACCGTCGTCGAGGCATCGAAGGATAATCCGGTCTTCTATGTGC
AATATGCCCATGCGCGGATTTGCTCGCTAGCAAGCCGCGCGGCCGAAGCGGGTATCGAGTTGGGCGACCCGCCCGATCTC
GCTCTTCTGGACGGTCCGAGCCTTACGCTTGTGAAGCGTGCGGCAGAATTCCCCCGCATCGTCGAGGCGGCTGCGGCAGC
GCGCGAGCCGCACCGGATCGCCTTCTTCCTTGAGGGGCTGGCCGCGGAATTCCATGCGCTGTGGAACACAGGAAATGCCG
ACCCGACGCGCCGCTTCGCCTACCCGGAAAACCTGCCGGTTAGCCGCGCGCGGTTGTTCCTGGCCGCCGCGATCGGGCAG
GTCATCCGCAACGGCCTGGCGCTGATGGGGGTTGAACCGACACATGAGATGGAGAGGGCCTAG

Upstream 100 bases:

>100_bases
TCCCGATCCGAATCCGGTTGCGGAAGCCATCCGGGATCACATCGCTTTCTGGAAAGGCGTAGAGGTTGGATAGCAGCCAA
GGCGCAGCGGGCCTTCGCTG

Downstream 100 bases:

>100_bases
TCGAATGCGCGCTTGTTCCTGGGGCTCGTTGCGCGCGCCAGAGTTGGCGGGCCCGAACATGCTGTGCGTCTTCTGATACT
GGTGGAACGAGATGGAGCTT

Product: arginyl-tRNA synthetase

Products: NA

Alternate protein names: Arginine--tRNA ligase; ArgRS [H]

Number of amino acids: Translated: 580; Mature: 579

Protein sequence:

>580_residues
MAVSLHARILDHLARVIGDLQVAGDVPAGLDRAGLTVERPHDPAHGDLSTNAAMVLAKLTGTHPRQLAEKLAGRLAMLED
VADVAVAGPGFVNIRLTDQAWQNELAVIADQKDRYGMSPVGAGKTVNIEFVSANPTGPMHMGHCRGAVVGDALANLLAFT
GHRVIREYYINDAGGQVDILARSAHQRYREALGESLGEIAEGLYPGDYLKPVGEALAADFGGRYADAPETDWLAIFRART
VAAMMETIREDLALLGISHDRFASEADLVAAGKPDDAEAWLRERDLVYDGVLEPPKGEVSKDWEPIALPLFRSTKFGDDQ
DRPIRKPDGSWTYFGVDLAYHFEKARDADELIDIWGADHAGTVMRIVAAAEALTEGRKRFDVKLVQIVRLLRAGEPVKMS
KRAGNFVTLADVIREVGKDVVRFMMLTRKAEASMDFDFATVVEASKDNPVFYVQYAHARICSLASRAAEAGIELGDPPDL
ALLDGPSLTLVKRAAEFPRIVEAAAAAREPHRIAFFLEGLAAEFHALWNTGNADPTRRFAYPENLPVSRARLFLAAAIGQ
VIRNGLALMGVEPTHEMERA

Sequences:

>Translated_580_residues
MAVSLHARILDHLARVIGDLQVAGDVPAGLDRAGLTVERPHDPAHGDLSTNAAMVLAKLTGTHPRQLAEKLAGRLAMLED
VADVAVAGPGFVNIRLTDQAWQNELAVIADQKDRYGMSPVGAGKTVNIEFVSANPTGPMHMGHCRGAVVGDALANLLAFT
GHRVIREYYINDAGGQVDILARSAHQRYREALGESLGEIAEGLYPGDYLKPVGEALAADFGGRYADAPETDWLAIFRART
VAAMMETIREDLALLGISHDRFASEADLVAAGKPDDAEAWLRERDLVYDGVLEPPKGEVSKDWEPIALPLFRSTKFGDDQ
DRPIRKPDGSWTYFGVDLAYHFEKARDADELIDIWGADHAGTVMRIVAAAEALTEGRKRFDVKLVQIVRLLRAGEPVKMS
KRAGNFVTLADVIREVGKDVVRFMMLTRKAEASMDFDFATVVEASKDNPVFYVQYAHARICSLASRAAEAGIELGDPPDL
ALLDGPSLTLVKRAAEFPRIVEAAAAAREPHRIAFFLEGLAAEFHALWNTGNADPTRRFAYPENLPVSRARLFLAAAIGQ
VIRNGLALMGVEPTHEMERA
>Mature_579_residues
AVSLHARILDHLARVIGDLQVAGDVPAGLDRAGLTVERPHDPAHGDLSTNAAMVLAKLTGTHPRQLAEKLAGRLAMLEDV
ADVAVAGPGFVNIRLTDQAWQNELAVIADQKDRYGMSPVGAGKTVNIEFVSANPTGPMHMGHCRGAVVGDALANLLAFTG
HRVIREYYINDAGGQVDILARSAHQRYREALGESLGEIAEGLYPGDYLKPVGEALAADFGGRYADAPETDWLAIFRARTV
AAMMETIREDLALLGISHDRFASEADLVAAGKPDDAEAWLRERDLVYDGVLEPPKGEVSKDWEPIALPLFRSTKFGDDQD
RPIRKPDGSWTYFGVDLAYHFEKARDADELIDIWGADHAGTVMRIVAAAEALTEGRKRFDVKLVQIVRLLRAGEPVKMSK
RAGNFVTLADVIREVGKDVVRFMMLTRKAEASMDFDFATVVEASKDNPVFYVQYAHARICSLASRAAEAGIELGDPPDLA
LLDGPSLTLVKRAAEFPRIVEAAAAAREPHRIAFFLEGLAAEFHALWNTGNADPTRRFAYPENLPVSRARLFLAAAIGQV
IRNGLALMGVEPTHEMERA

Specific function: Unknown

COG id: COG0018

COG function: function code J; Arginyl-tRNA synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Homo sapiens, GI15149476, Length=600, Percent_Identity=21.5, Blast_Score=94, Evalue=3e-19,
Organism=Escherichia coli, GI1788184, Length=159, Percent_Identity=35.8490566037736, Blast_Score=92, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI71985061, Length=628, Percent_Identity=22.1337579617834, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71985068, Length=580, Percent_Identity=22.5862068965517, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI18859963, Length=589, Percent_Identity=22.4108658743633, Blast_Score=87, Evalue=4e-17,

Paralogues:

None

Copy number: 789 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001412
- InterPro:   IPR001278
- InterPro:   IPR015945
- InterPro:   IPR005148
- InterPro:   IPR008909
- InterPro:   IPR014729
- InterPro:   IPR009080 [H]

Pfam domain/function: PF03485 Arg_tRNA_synt_N; PF05746 DALR_1; PF00750 tRNA-synt_1d [H]

EC number: =6.1.1.19 [H]

Molecular weight: Translated: 63133; Mature: 63001

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVSLHARILDHLARVIGDLQVAGDVPAGLDRAGLTVERPHDPAHGDLSTNAAMVLAKLT
CCEEHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHC
GTHPRQLAEKLAGRLAMLEDVADVAVAGPGFVNIRLTDQAWQNELAVIADQKDRYGMSPV
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCEEEEECCCCCCCCCCC
GAGKTVNIEFVSANPTGPMHMGHCRGAVVGDALANLLAFTGHRVIREYYINDAGGQVDIL
CCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEH
ARSAHQRYREALGESLGEIAEGLYPGDYLKPVGEALAADFGGRYADAPETDWLAIFRART
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
VAAMMETIREDLALLGISHDRFASEADLVAAGKPDDAEAWLRERDLVYDGVLEPPKGEVS
HHHHHHHHHHHHHHHCCCHHHHCCCCCEEECCCCCCHHHHHHHCCHHHCCCCCCCCCCCC
KDWEPIALPLFRSTKFGDDQDRPIRKPDGSWTYFGVDLAYHFEKARDADELIDIWGADHA
CCCCCEEEEHHHCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHCCHHHHHHHHCCCCH
GTVMRIVAAAEALTEGRKRFDVKLVQIVRLLRAGEPVKMSKRAGNFVTLADVIREVGKDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEHHHHHHHHHHHH
VRFMMLTRKAEASMDFDFATVVEASKDNPVFYVQYAHARICSLASRAAEAGIELGDPPDL
HHHHHHHHHHHCCCCCCHHHHEECCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCE
ALLDGPSLTLVKRAAEFPRIVEAAAAAREPHRIAFFLEGLAAEFHALWNTGNADPTRRFA
EEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
YPENLPVSRARLFLAAAIGQVIRNGLALMGVEPTHEMERA
CCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHCC
>Mature Secondary Structure 
AVSLHARILDHLARVIGDLQVAGDVPAGLDRAGLTVERPHDPAHGDLSTNAAMVLAKLT
CEEHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHC
GTHPRQLAEKLAGRLAMLEDVADVAVAGPGFVNIRLTDQAWQNELAVIADQKDRYGMSPV
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCEEEEECCCCCCCCCCC
GAGKTVNIEFVSANPTGPMHMGHCRGAVVGDALANLLAFTGHRVIREYYINDAGGQVDIL
CCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEH
ARSAHQRYREALGESLGEIAEGLYPGDYLKPVGEALAADFGGRYADAPETDWLAIFRART
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
VAAMMETIREDLALLGISHDRFASEADLVAAGKPDDAEAWLRERDLVYDGVLEPPKGEVS
HHHHHHHHHHHHHHHCCCHHHHCCCCCEEECCCCCCHHHHHHHCCHHHCCCCCCCCCCCC
KDWEPIALPLFRSTKFGDDQDRPIRKPDGSWTYFGVDLAYHFEKARDADELIDIWGADHA
CCCCCEEEEHHHCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHCCHHHHHHHHCCCCH
GTVMRIVAAAEALTEGRKRFDVKLVQIVRLLRAGEPVKMSKRAGNFVTLADVIREVGKDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEHHHHHHHHHHHH
VRFMMLTRKAEASMDFDFATVVEASKDNPVFYVQYAHARICSLASRAAEAGIELGDPPDL
HHHHHHHHHHHCCCCCCHHHHEECCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCE
ALLDGPSLTLVKRAAEFPRIVEAAAAAREPHRIAFFLEGLAAEFHALWNTGNADPTRRFA
EEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
YPENLPVSRARLFLAAAIGQVIRNGLALMGVEPTHEMERA
CCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA