| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103485559
Identifier: 103485559
GI number: 103485559
Start: 69196
End: 69759
Strand: Direct
Name: 103485559
Synonym: Sala_0061
Alternate gene names: NA
Gene position: 69196-69759 (Clockwise)
Preceding gene: 103485558
Following gene: 103485560
Centisome position: 2.07
GC content: 63.65
Gene sequence:
>564_bases ATGCATCGGTTTTTTTGGGGGATGTTGCTGTCGATCGCCGTCGTCACCCCTGCTAACGCGGAATATGGCTGGTGCACGAT CCAGAAAGATACCTCGTACGACACCTATCTTTCAGCGGTCGTCGACATCGGCGAGGGAGGGAATGTCCATCAGGAAGTGC TGACGCGCCAGTTCGGCCGCGCTTTTCAGGGCTATGTTGCACAGTTCGAGACAATCGTTCGCGAGCCCGACTGCCACTCT TCCAAGCGACTGAGCGACGCTGAAGAGGGCAATAGGCGCTATTCGATGAGCGTCGGACAAGTCATTCGTACCAACTGGCG GGGAGCATGGCCCGCGCCCGGCGCGCCTTCTGGGCCAGCCGCGGCATCGGGTAGCCATCTGACCGTCTCGTCACCGCCAG CGCCCGCCGCTCCGGAGTGGAGCGAGGTGCAGCAGCAACAACAGCGTCAGGCGGCTGCGGAACTCGCCCGCAACATCGCC GCCAGCGCCAAGGCGAGGGCGGAATCGGAGGCGGCGCTCACGGCGTTTCTCGACGCCATGCGCAAGCGGGGGCGCGCGCA ATGA
Upstream 100 bases:
>100_bases CTTGAGACGCTTCTCCGCGAGCCTTGATTTGGCAGGAACGGCTCGCCAATGTCTGCGGATATTCGGTATAGATTCTCACA CATGTAAACGAGGGGCTTGG
Downstream 100 bases:
>100_bases AACATCATCTGAAGCTCTTGATGCTGGCGATCGCGGCCGCGATGATTGGCGGTCCCGCGATGGCGCAGATTGAAAGCGCA CAGCCTTTGCCCGTCGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MHRFFWGMLLSIAVVTPANAEYGWCTIQKDTSYDTYLSAVVDIGEGGNVHQEVLTRQFGRAFQGYVAQFETIVREPDCHS SKRLSDAEEGNRRYSMSVGQVIRTNWRGAWPAPGAPSGPAAASGSHLTVSSPPAPAAPEWSEVQQQQQRQAAAELARNIA ASAKARAESEAALTAFLDAMRKRGRAQ
Sequences:
>Translated_187_residues MHRFFWGMLLSIAVVTPANAEYGWCTIQKDTSYDTYLSAVVDIGEGGNVHQEVLTRQFGRAFQGYVAQFETIVREPDCHS SKRLSDAEEGNRRYSMSVGQVIRTNWRGAWPAPGAPSGPAAASGSHLTVSSPPAPAAPEWSEVQQQQQRQAAAELARNIA ASAKARAESEAALTAFLDAMRKRGRAQ >Mature_187_residues MHRFFWGMLLSIAVVTPANAEYGWCTIQKDTSYDTYLSAVVDIGEGGNVHQEVLTRQFGRAFQGYVAQFETIVREPDCHS SKRLSDAEEGNRRYSMSVGQVIRTNWRGAWPAPGAPSGPAAASGSHLTVSSPPAPAAPEWSEVQQQQQRQAAAELARNIA ASAKARAESEAALTAFLDAMRKRGRAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20352; Mature: 20352
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRFFWGMLLSIAVVTPANAEYGWCTIQKDTSYDTYLSAVVDIGEGGNVHQEVLTRQFGR CCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH AFQGYVAQFETIVREPDCHSSKRLSDAEEGNRRYSMSVGQVIRTNWRGAWPAPGAPSGPA HHHHHHHHHHHHHCCCCCCCHHCCCCHHHCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCC AASGSHLTVSSPPAPAAPEWSEVQQQQQRQAAAELARNIAASAKARAESEAALTAFLDAM CCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKRGRAQ HHCCCCC >Mature Secondary Structure MHRFFWGMLLSIAVVTPANAEYGWCTIQKDTSYDTYLSAVVDIGEGGNVHQEVLTRQFGR CCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH AFQGYVAQFETIVREPDCHSSKRLSDAEEGNRRYSMSVGQVIRTNWRGAWPAPGAPSGPA HHHHHHHHHHHHHCCCCCCCHHCCCCHHHCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCC AASGSHLTVSSPPAPAAPEWSEVQQQQQRQAAAELARNIAASAKARAESEAALTAFLDAM CCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKRGRAQ HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA