The gene/protein map for NC_012785 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is yhaO [H]

Identifier: 103485548

GI number: 103485548

Start: 54644

End: 55894

Strand: Reverse

Name: yhaO [H]

Synonym: Sala_0050

Alternate gene names: 103485548

Gene position: 55894-54644 (Counterclockwise)

Preceding gene: 103485549

Following gene: 103485547

Centisome position: 1.67

GC content: 62.11

Gene sequence:

>1251_bases
ATGACAGGAACCTTTACTTTCGTTCACGCGGCCGATGTTCATCTCGACAGCCCGCTTGGCGGATTGGCGAAGCGGGACAA
AGCCTTTAGCGGTCTGGCCCTCAACGCGACCCGGCGCGCCCTTGCGAATGTCGTCGATCTGGCCATCGCGGAGGGGGCCG
CATTTGTCGTCGTCGCAGGCGACCTCTACGACGGCACCTGGAAGGATCAGTCGACCGGGCAGTTTGCGGTTTCCCAGTTT
GCGCGGCTGTCGCGAGCGGGCATTCGCGTCGCCATCGCCTTCGGAAATCATGATGCCGAAAGCCGGATTACCCGCCATTT
GACCATGCCGGAAGGCGTTTTCGGATTCTCCAATCGGAAGTGCGAGACCGTCCTGTTCGAGGATCTCGGAGTCGCGCTGC
ACGGCCGAAGCTACAAGGATGTAGCGACCCTCGAGAATATCGCAGCTGAATATTGTCCGCCGGTCACCGGGATGTTCAAC
TTGGCGGTGCTTCACACCGCGCTTGAAGGGCATCCGGATCATGCGCGCTACGCGCCCTGCTCCGTCGGCGAGCTCGTGGC
GTCGGGACATGACTATTGGGCGCTTGGCCATGTCCATGATGCATCAATCCGCTCCGAGCATCCGCACATCGTTTATCCAG
GCAATACCCAGGGCCGGAATGTCAGGGAGACCGGCGTCAAGGGTGCCATGGTGGTTCGAGTGGAGGAAGGCGTCGTGCGG
TCGGTCGAACACCGCGCGTGTGACGAAGTGCGATGGGCTCGGCCGGAGTTCGACGGGCGACAGGCGAGCGACATGCACGA
GCTTCTCTCCGGCATCGGCGGTGTGCTCCAAGAAGCCATCGCAGGCGCGGGCGACCGACCGACGGCGGTACGCCTTCACG
TGAAGACCTCTGGCGGCCTCCAAAACAAACTGCTCGCCGATCCGGATTGGTTTAACGCGGAAGTCGGCGCGCGCGCCATG
ACCGTGTCGGAGAGTTTGTGGATCGAAAGGGTTAAGGTTGAAAGCAGTGAAGACGCCGCTACTCGGGGGCTTCCGCCTGA
GTTGATCGAACTGCTGAATGGCGCATTGGCCGATCCGGATTGTCTGCGCGCGGTGGAGGATGCGGTCGCGCCGCTTGTCG
GCAAGATGCCTGCTGGCACGATTGATGCGGATCTTGCACCGCTATTGGCCGCAGCAAGCGCGCGGGATGGTAACTCCCTG
CTCGCGGCGGCAAAGCGAGCCGTCGAAGCTTCGCTAAGCGTAGATGCCTGA

Upstream 100 bases:

>100_bases
ATATGGTCCGAAGGACGGGCCGCTATCTAGAAGTGGAGATCCTGACTAAGATGTATGAATCGATGATAAGACCTCCGCAA
TATTGAAGAAGTTCAAAAAA

Downstream 100 bases:

>100_bases
TGCGATTCCAGCTGCTCGATCTGGTCCGCTATGGCGGTTTTGCGGATCGCGTCGTCACGTTCGGGCCGGGGCGGCCGGAT
CTTCATCTCGTCATGGGGCC

Product: metallophosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MTGTFTFVHAADVHLDSPLGGLAKRDKAFSGLALNATRRALANVVDLAIAEGAAFVVVAGDLYDGTWKDQSTGQFAVSQF
ARLSRAGIRVAIAFGNHDAESRITRHLTMPEGVFGFSNRKCETVLFEDLGVALHGRSYKDVATLENIAAEYCPPVTGMFN
LAVLHTALEGHPDHARYAPCSVGELVASGHDYWALGHVHDASIRSEHPHIVYPGNTQGRNVRETGVKGAMVVRVEEGVVR
SVEHRACDEVRWARPEFDGRQASDMHELLSGIGGVLQEAIAGAGDRPTAVRLHVKTSGGLQNKLLADPDWFNAEVGARAM
TVSESLWIERVKVESSEDAATRGLPPELIELLNGALADPDCLRAVEDAVAPLVGKMPAGTIDADLAPLLAAASARDGNSL
LAAAKRAVEASLSVDA

Sequences:

>Translated_416_residues
MTGTFTFVHAADVHLDSPLGGLAKRDKAFSGLALNATRRALANVVDLAIAEGAAFVVVAGDLYDGTWKDQSTGQFAVSQF
ARLSRAGIRVAIAFGNHDAESRITRHLTMPEGVFGFSNRKCETVLFEDLGVALHGRSYKDVATLENIAAEYCPPVTGMFN
LAVLHTALEGHPDHARYAPCSVGELVASGHDYWALGHVHDASIRSEHPHIVYPGNTQGRNVRETGVKGAMVVRVEEGVVR
SVEHRACDEVRWARPEFDGRQASDMHELLSGIGGVLQEAIAGAGDRPTAVRLHVKTSGGLQNKLLADPDWFNAEVGARAM
TVSESLWIERVKVESSEDAATRGLPPELIELLNGALADPDCLRAVEDAVAPLVGKMPAGTIDADLAPLLAAASARDGNSL
LAAAKRAVEASLSVDA
>Mature_415_residues
TGTFTFVHAADVHLDSPLGGLAKRDKAFSGLALNATRRALANVVDLAIAEGAAFVVVAGDLYDGTWKDQSTGQFAVSQFA
RLSRAGIRVAIAFGNHDAESRITRHLTMPEGVFGFSNRKCETVLFEDLGVALHGRSYKDVATLENIAAEYCPPVTGMFNL
AVLHTALEGHPDHARYAPCSVGELVASGHDYWALGHVHDASIRSEHPHIVYPGNTQGRNVRETGVKGAMVVRVEEGVVRS
VEHRACDEVRWARPEFDGRQASDMHELLSGIGGVLQEAIAGAGDRPTAVRLHVKTSGGLQNKLLADPDWFNAEVGARAMT
VSESLWIERVKVESSEDAATRGLPPELIELLNGALADPDCLRAVEDAVAPLVGKMPAGTIDADLAPLLAAASARDGNSLL
AAAKRAVEASLSVDA

Specific function: Unknown

COG id: COG0420

COG function: function code L; DNA repair exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843
- InterPro:   IPR014576 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: NA

Molecular weight: Translated: 44199; Mature: 44068

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGTFTFVHAADVHLDSPLGGLAKRDKAFSGLALNATRRALANVVDLAIAEGAAFVVVAG
CCCEEEEEEEECEEECCCCCCHHHHHHHHCCEEEHHHHHHHHHHHHHHHHCCCEEEEEEC
DLYDGTWKDQSTGQFAVSQFARLSRAGIRVAIAFGNHDAESRITRHLTMPEGVFGFSNRK
CCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCC
CETVLFEDLGVALHGRSYKDVATLENIAAEYCPPVTGMFNLAVLHTALEGHPDHARYAPC
CCEEEHHHCCEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
SVGELVASGHDYWALGHVHDASIRSEHPHIVYPGNTQGRNVRETGVKGAMVVRVEEGVVR
CHHHHHHCCCCEEEECCEECCCCCCCCCEEEECCCCCCCCHHHCCCCCEEEEEECCHHHH
SVEHRACDEVRWARPEFDGRQASDMHELLSGIGGVLQEAIAGAGDRPTAVRLHVKTSGGL
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
QNKLLADPDWFNAEVGARAMTVSESLWIERVKVESSEDAATRGLPPELIELLNGALADPD
CCCCCCCCCCCCCCCCCEEEEEHHHHHHEEEEECCCCCHHHCCCCHHHHHHHCCCCCCHH
CLRAVEDAVAPLVGKMPAGTIDADLAPLLAAASARDGNSLLAAAKRAVEASLSVDA
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TGTFTFVHAADVHLDSPLGGLAKRDKAFSGLALNATRRALANVVDLAIAEGAAFVVVAG
CCEEEEEEEECEEECCCCCCHHHHHHHHCCEEEHHHHHHHHHHHHHHHHCCCEEEEEEC
DLYDGTWKDQSTGQFAVSQFARLSRAGIRVAIAFGNHDAESRITRHLTMPEGVFGFSNRK
CCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCC
CETVLFEDLGVALHGRSYKDVATLENIAAEYCPPVTGMFNLAVLHTALEGHPDHARYAPC
CCEEEHHHCCEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
SVGELVASGHDYWALGHVHDASIRSEHPHIVYPGNTQGRNVRETGVKGAMVVRVEEGVVR
CHHHHHHCCCCEEEECCEECCCCCCCCCEEEECCCCCCCCHHHCCCCCEEEEEECCHHHH
SVEHRACDEVRWARPEFDGRQASDMHELLSGIGGVLQEAIAGAGDRPTAVRLHVKTSGGL
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
QNKLLADPDWFNAEVGARAMTVSESLWIERVKVESSEDAATRGLPPELIELLNGALADPD
CCCCCCCCCCCCCCCCCEEEEEHHHHHHEEEEECCCCCHHHCCCCHHHHHHHCCCCCCHH
CLRAVEDAVAPLVGKMPAGTIDADLAPLLAAASARDGNSLLAAAKRAVEASLSVDA
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]