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The map label for this gene is petP [H]

Identifier: 103485544

GI number: 103485544

Start: 46964

End: 47527

Strand: Reverse

Name: petP [H]

Synonym: Sala_0046

Alternate gene names: 103485544

Gene position: 47527-46964 (Counterclockwise)

Preceding gene: 103485547

Following gene: 103485541

Centisome position: 1.42

GC content: 68.09

Gene sequence:

>564_bases
ATGGAGCGCGCCTCTTGCCAAAGACCGGCGCGGCGCGCAACGGTAGCGACCATGCCGGATGACAATTTTCTTTCACAAGT
TCCCGCCGCCTCTGCCCTTTTCTTGCGCGAGGAAGAGGTGCGCCGCGGCATCGAGTTTCTTTTTTTCGCCCATGCCTCGC
TTTGGCGCGCGATCGACACGCCGCTCGCCGAAAAGGCGCTCGGACGCGCGCATTATCGCGCGCTCTATTTCATCGCGCGC
CAGCCGGGGCTCACGATTTCGGACCTGCTGGCATTGCTCGGCATCACCAAGCAATCGCTGGGACGCGTGGTGAAGGAGCT
GGAAGCGCGCGGCCTGGTGGCGACGCGGCCGGGCAATCGCGACCGCCGCGCCAAGGAACTGCGGCTGACCGACGCCGGCC
GCGCCGCAGAGCGCGAGCTGTTCGGCGCGCTGCGCGACGCCATGAGCCGCGCCTATACCCATGCCGGGCAACAGGCGGTG
ACGGGTTTCTGGCAGGTCAGCGAGGCGCTGGTCCCGCCGCGCGACCGGCGCCGCATCGCGACGCTGGGGAAGGAGGCCGG
TTAG

Upstream 100 bases:

>100_bases
GGCGATCGCCGCCGCGCGTACGTCATCGGCCACGGGACTGGGATGGGGCAGACGGGCGAAGGCGGGAGCGGACATCAAAA
ACACCTGTTGTTGGCGGTTT

Downstream 100 bases:

>100_bases
AGCGGCGTGCTGTAAATCAGCCCTCGCCGCGTGCGATCTCGGCAAGCTCGCGCCCGCGATCGCGCGCCGCGCGCAGGACA
TTGGTGAGCAGCGCGGCGAG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MERASCQRPARRATVATMPDDNFLSQVPAASALFLREEEVRRGIEFLFFAHASLWRAIDTPLAEKALGRAHYRALYFIAR
QPGLTISDLLALLGITKQSLGRVVKELEARGLVATRPGNRDRRAKELRLTDAGRAAERELFGALRDAMSRAYTHAGQQAV
TGFWQVSEALVPPRDRRRIATLGKEAG

Sequences:

>Translated_187_residues
MERASCQRPARRATVATMPDDNFLSQVPAASALFLREEEVRRGIEFLFFAHASLWRAIDTPLAEKALGRAHYRALYFIAR
QPGLTISDLLALLGITKQSLGRVVKELEARGLVATRPGNRDRRAKELRLTDAGRAAERELFGALRDAMSRAYTHAGQQAV
TGFWQVSEALVPPRDRRRIATLGKEAG
>Mature_187_residues
MERASCQRPARRATVATMPDDNFLSQVPAASALFLREEEVRRGIEFLFFAHASLWRAIDTPLAEKALGRAHYRALYFIAR
QPGLTISDLLALLGITKQSLGRVVKELEARGLVATRPGNRDRRAKELRLTDAGRAAERELFGALRDAMSRAYTHAGQQAV
TGFWQVSEALVPPRDRRRIATLGKEAG

Specific function: Necessary for photosynthetic and respiratory growth [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 20811; Mature: 20811

Theoretical pI: Translated: 11.27; Mature: 11.27

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERASCQRPARRATVATMPDDNFLSQVPAASALFLREEEVRRGIEFLFFAHASLWRAIDT
CCCCCCCCCHHHCEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PLAEKALGRAHYRALYFIARQPGLTISDLLALLGITKQSLGRVVKELEARGLVATRPGNR
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCC
DRRAKELRLTDAGRAAERELFGALRDAMSRAYTHAGQQAVTGFWQVSEALVPPRDRRRIA
CHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHH
TLGKEAG
HHCCCCC
>Mature Secondary Structure
MERASCQRPARRATVATMPDDNFLSQVPAASALFLREEEVRRGIEFLFFAHASLWRAIDT
CCCCCCCCCHHHCEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PLAEKALGRAHYRALYFIARQPGLTISDLLALLGITKQSLGRVVKELEARGLVATRPGNR
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCC
DRRAKELRLTDAGRAAERELFGALRDAMSRAYTHAGQQAVTGFWQVSEALVPPRDRRRIA
CHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHH
TLGKEAG
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1323023 [H]