Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485531

Identifier: 103485531

GI number: 103485531

Start: 32447

End: 32764

Strand: Reverse

Name: 103485531

Synonym: Sala_0033

Alternate gene names: NA

Gene position: 32764-32447 (Counterclockwise)

Preceding gene: 103485537

Following gene: 103485530

Centisome position: 0.98

GC content: 72.33

Gene sequence:

>318_bases
ATGAAAAAATCGATCACGCTGTCGCTCGTCCTCGCCGCTTCGCTCGGCCTCGCCGCCTGCGCTGAAAAGGCTGCCGACGA
CGCAGCTGCCACCGATGACGCCGCCGCGACCGTTGAAGGCGCGGCTGATGGTGCGATGGAAGCGGCCGAGGGCGCTGCCG
ACGCGGCCGCCGCTGCGGGCGACGCCGCCGACGCCGCGGGCGATGCCGCCGCTGCCGGCGACGCCGCCACGGCCGCCGAC
AAGGCCGCCGAAGCTGCGGACGCCGCCAAGGAAGCGACCGACGCCGCCAAGGGCGCGATGGAAGAAGCCAAGAAGTAA

Upstream 100 bases:

>100_bases
GCCTTTTGGCGAGACGGTAATTCTGCGCGCGATTGGCATTTTTCGGGATCGATCCGTTCCTGTGCCGGTCGGTCAGTTCA
ATTGAGAGGGGTATTCCCAC

Downstream 100 bases:

>100_bases
TTTTCTTTCAGGCTTTTATCGGCTGATGAACGAAGAAGGGGCTGTCGGTTCGCCGACAGCCTCTTTTTCTTTCGGGCCGC
GCCCTGACCATCGGCACGGC

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MKKSITLSLVLAASLGLAACAEKAADDAAATDDAAATVEGAADGAMEAAEGAADAAAAAGDAADAAGDAAAAGDAATAAD
KAAEAADAAKEATDAAKGAMEEAKK

Sequences:

>Translated_105_residues
MKKSITLSLVLAASLGLAACAEKAADDAAATDDAAATVEGAADGAMEAAEGAADAAAAAGDAADAAGDAAAAGDAATAAD
KAAEAADAAKEATDAAKGAMEEAKK
>Mature_105_residues
MKKSITLSLVLAASLGLAACAEKAADDAAATDDAAATVEGAADGAMEAAEGAADAAAAAGDAADAAGDAAAAGDAATAAD
KAAEAADAAKEATDAAKGAMEEAKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9581; Mature: 9581

Theoretical pI: Translated: 3.80; Mature: 3.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSITLSLVLAASLGLAACAEKAADDAAATDDAAATVEGAADGAMEAAEGAADAAAAAG
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCC
DAADAAGDAAAAGDAATAADKAAEAADAAKEATDAAKGAMEEAKK
CCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKSITLSLVLAASLGLAACAEKAADDAAATDDAAATVEGAADGAMEAAEGAADAAAAAG
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCC
DAADAAGDAAAAGDAATAADKAAEAADAAKEATDAAKGAMEEAKK
CCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA