| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103485530
Identifier: 103485530
GI number: 103485530
Start: 31966
End: 32262
Strand: Reverse
Name: 103485530
Synonym: Sala_0032
Alternate gene names: NA
Gene position: 32262-31966 (Counterclockwise)
Preceding gene: 103485531
Following gene: 103485529
Centisome position: 0.96
GC content: 69.7
Gene sequence:
>297_bases ATGCGCAAGATCATTATCGCTTCGATGGCCGCCGCGGCCTTCAGCCTCGCCGCCTGTTCGGAACAGACCCAGGACGCGGC CGCCGACACCGCCGCATCGGCCGGCGAAGATGTCGAAGCCGCGGGCGAGGCCATGGCCGAAGGCGCCGCCGATGCCGCCG CCGCGACGGCCGAAGCCGCCGACGACGCGGGCAACGCTGTCGAAGGCACGGTGAACGCTGCCGGCGACGCCGTCGAAGCT GCTGGCGACAAGGTCGCCGAAGAAACCGCCAAGGCCGAAGCCAACGACAAGCAGTAA
Upstream 100 bases:
>100_bases TGACCATCGGCACGGCGCAGCACCGTGGTTGCCAAGCTGCGGATCGGTCGTTAGGTCTCACCCCATGGCCCCGGTGGCCA TTGCATTCGAAAGGAAACCC
Downstream 100 bases:
>100_bases GTCGTCGCTTCGCCTTCGGGCTGATATGGGGCTCCATCCGGCAAGGGTGGAGCCCTTTTTCATGGGAGCAGAGCGATGGG CAAAAAATCGATGGTGATCA
Product: entericidin EcnAB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MRKIIIASMAAAAFSLAACSEQTQDAAADTAASAGEDVEAAGEAMAEGAADAAAATAEAADDAGNAVEGTVNAAGDAVEA AGDKVAEETAKAEANDKQ
Sequences:
>Translated_98_residues MRKIIIASMAAAAFSLAACSEQTQDAAADTAASAGEDVEAAGEAMAEGAADAAAATAEAADDAGNAVEGTVNAAGDAVEA AGDKVAEETAKAEANDKQ >Mature_98_residues MRKIIIASMAAAAFSLAACSEQTQDAAADTAASAGEDVEAAGEAMAEGAADAAAATAEAADDAGNAVEGTVNAAGDAVEA AGDKVAEETAKAEANDKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9345; Mature: 9345
Theoretical pI: Translated: 3.59; Mature: 3.59
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKIIIASMAAAAFSLAACSEQTQDAAADTAASAGEDVEAAGEAMAEGAADAAAATAEAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHH DDAGNAVEGTVNAAGDAVEAAGDKVAEETAKAEANDKQ CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRKIIIASMAAAAFSLAACSEQTQDAAADTAASAGEDVEAAGEAMAEGAADAAAATAEAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHH DDAGNAVEGTVNAAGDAVEAAGDKVAEETAKAEANDKQ CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA