Click here to switch to the map view.

The map label for this gene is 103485526

Identifier: 103485526

GI number: 103485526

Start: 24779

End: 25867

Strand: Reverse

Name: 103485526

Synonym: Sala_0028

Alternate gene names: NA

Gene position: 25867-24779 (Counterclockwise)

Preceding gene: 103485527

Following gene: 103485525

Centisome position: 0.77

GC content: 66.39

Gene sequence:

>1089_bases
ATGATGAAACTGCTCGACACGCTGCACCGCTGGACGGGGGGGCTCATCGGCCTGGTGCTCGCGCTGCTCGGCCTGTCGGG
CACGATCCTGCTTTACGAGCATCTGTGGATCGGCGTGCCGGGCGCGGGCGATCCGCTGCGAGGCGATCTTGCCACCGTCG
CCGCGGCCACCGAAAAGCTGATGGCGGCACAGGGGACGCAGGGCATCATCTATGCCGACGAACGCTTCGGGCTGCACCAA
CTGCGGCTCGCAGAAGGTGCGGGCGCCTATGCCAGTCAGTCGGGCGAGATTGTCACGCGCTGGGCGAGCCAGTGGGAGCG
GCCCGAACTCTGGCTCTTCGATTTCCACCACCATCTCTTCGTCGGCGACAATGGCGAATGGGTGATCGGCGTCGCAGGGC
TTGCAGGGCTGTTTTTCGTGATCAGCGGCGTCATCCTGTGGTGGCGCACACGGCGGACTTTCCAGCTTCGCCTGTGGCCC
AAAAGGATGAGCCGCCCGTCGGTCCTGATGCACCACCGCGACCTCGGCATCGTCGCCGCGCCCTTGTTGCTGATTTCGAT
CGTCACCGGCACGATGATGATCTTCCGCCCGTTCGCCCTGGGGGTGGTCGCCCCCTTCGGATCGCCCGCCGAAACCGCGA
AGGCGCTCGATCTGCCGAAATACATGGGTGGCCCGCTTGCCGAAAAGCCCGATTACACCGCGATGCTGACCAAAGCGCAC
CGCCGCTTCCCCGACGCCGAGTTCCGCATCCTCAGCCTGCCGCGCAAGGATGGCGACCCGATCAGCCTGCGCATGAAACA
GCCCGCCGAATGGCTCCCCAATGGTCGCACGACCCTGTGGTTCGACGCCGCGACCGGCGACGTGCTGGGCGCGCGCGATG
CGCTCGCGATGCCGCCGGGGGCGCAGGCGTTCAACATGGCCTTCCCGCTCCATGCGTCGAGGGTCGGCGGCTGGGCATGG
CGCAGCTTGCTGACGGTTTCGGGACTTTCGCTGACGCTGCTTGGCAGCCTCGCGGTATGGACCTTCTGGTTCAGGCGGCC
GAAAACGGCGAAGCGCGCAGCAAAGAAGACAGCGCTGGCTTCGGCCTAG

Upstream 100 bases:

>100_bases
TATCAGCTACGCGAGCGACACCCAGCGGCCGACCGACAATTTCTTCAATTTTGCCGGGCGCGGCCGCACCTTCACGCTCG
GCTGGGATTATCGCTTTTAA

Downstream 100 bases:

>100_bases
GCGCAAAAGGCTGCGTTGGGTTGGTAAGCGGGGGTTAGAGCGGCGATTGGCGCTCGATTGCACCCCCCTCCCCACCACCG
CTTTGCGGCGGGTCCCCCTC

Product: PepSY-associated TM helix

Products: NA

Alternate protein names: PepSY-Associated TM Helix; PepSY-Associated TM Helix Domain Protein; Iron-Uptake Factor; Iron-Regulated Membrane Protein; PepSY-Associated TM Helix Family; PepSY-Associated TM Helix Family Protein; Rare Lipoprotein B

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MMKLLDTLHRWTGGLIGLVLALLGLSGTILLYEHLWIGVPGAGDPLRGDLATVAAATEKLMAAQGTQGIIYADERFGLHQ
LRLAEGAGAYASQSGEIVTRWASQWERPELWLFDFHHHLFVGDNGEWVIGVAGLAGLFFVISGVILWWRTRRTFQLRLWP
KRMSRPSVLMHHRDLGIVAAPLLLISIVTGTMMIFRPFALGVVAPFGSPAETAKALDLPKYMGGPLAEKPDYTAMLTKAH
RRFPDAEFRILSLPRKDGDPISLRMKQPAEWLPNGRTTLWFDAATGDVLGARDALAMPPGAQAFNMAFPLHASRVGGWAW
RSLLTVSGLSLTLLGSLAVWTFWFRRPKTAKRAAKKTALASA

Sequences:

>Translated_362_residues
MMKLLDTLHRWTGGLIGLVLALLGLSGTILLYEHLWIGVPGAGDPLRGDLATVAAATEKLMAAQGTQGIIYADERFGLHQ
LRLAEGAGAYASQSGEIVTRWASQWERPELWLFDFHHHLFVGDNGEWVIGVAGLAGLFFVISGVILWWRTRRTFQLRLWP
KRMSRPSVLMHHRDLGIVAAPLLLISIVTGTMMIFRPFALGVVAPFGSPAETAKALDLPKYMGGPLAEKPDYTAMLTKAH
RRFPDAEFRILSLPRKDGDPISLRMKQPAEWLPNGRTTLWFDAATGDVLGARDALAMPPGAQAFNMAFPLHASRVGGWAW
RSLLTVSGLSLTLLGSLAVWTFWFRRPKTAKRAAKKTALASA
>Mature_362_residues
MMKLLDTLHRWTGGLIGLVLALLGLSGTILLYEHLWIGVPGAGDPLRGDLATVAAATEKLMAAQGTQGIIYADERFGLHQ
LRLAEGAGAYASQSGEIVTRWASQWERPELWLFDFHHHLFVGDNGEWVIGVAGLAGLFFVISGVILWWRTRRTFQLRLWP
KRMSRPSVLMHHRDLGIVAAPLLLISIVTGTMMIFRPFALGVVAPFGSPAETAKALDLPKYMGGPLAEKPDYTAMLTKAH
RRFPDAEFRILSLPRKDGDPISLRMKQPAEWLPNGRTTLWFDAATGDVLGARDALAMPPGAQAFNMAFPLHASRVGGWAW
RSLLTVSGLSLTLLGSLAVWTFWFRRPKTAKRAAKKTALASA

Specific function: Unknown

COG id: COG3182

COG function: function code S; Uncharacterized iron-regulated membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39808; Mature: 39808

Theoretical pI: Translated: 10.78; Mature: 10.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKLLDTLHRWTGGLIGLVLALLGLSGTILLYEHLWIGVPGAGDPLRGDLATVAAATEKL
CHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEEHHEEECCCCCCCCCCHHHHHHHHHHHH
MAAQGTQGIIYADERFGLHQLRLAEGAGAYASQSGEIVTRWASQWERPELWLFDFHHHLF
HHHCCCCCEEEECCCCCHHHEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECEEEE
VGDNGEWVIGVAGLAGLFFVISGVILWWRTRRTFQLRLWPKRMSRPSVLMHHRDLGIVAA
ECCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHCCCCCEEEEECCCHHHHH
PLLLISIVTGTMMIFRPFALGVVAPFGSPAETAKALDLPKYMGGPLAEKPDYTAMLTKAH
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHH
RRFPDAEFRILSLPRKDGDPISLRMKQPAEWLPNGRTTLWFDAATGDVLGARDALAMPPG
HHCCCCCEEEEECCCCCCCCEEEEECCCHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCC
AQAFNMAFPLHASRVGGWAWRSLLTVSGLSLTLLGSLAVWTFWFRRPKTAKRAAKKTALA
CCCEEEECCCHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
SA
CC
>Mature Secondary Structure
MMKLLDTLHRWTGGLIGLVLALLGLSGTILLYEHLWIGVPGAGDPLRGDLATVAAATEKL
CHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEEHHEEECCCCCCCCCCHHHHHHHHHHHH
MAAQGTQGIIYADERFGLHQLRLAEGAGAYASQSGEIVTRWASQWERPELWLFDFHHHLF
HHHCCCCCEEEECCCCCHHHEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECEEEE
VGDNGEWVIGVAGLAGLFFVISGVILWWRTRRTFQLRLWPKRMSRPSVLMHHRDLGIVAA
ECCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHCCCCCEEEEECCCHHHHH
PLLLISIVTGTMMIFRPFALGVVAPFGSPAETAKALDLPKYMGGPLAEKPDYTAMLTKAH
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHH
RRFPDAEFRILSLPRKDGDPISLRMKQPAEWLPNGRTTLWFDAATGDVLGARDALAMPPG
HHCCCCCEEEEECCCCCCCCEEEEECCCHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCC
AQAFNMAFPLHASRVGGWAWRSLLTVSGLSLTLLGSLAVWTFWFRRPKTAKRAAKKTALA
CCCEEEECCCHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
SA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA