| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103485524
Identifier: 103485524
GI number: 103485524
Start: 20688
End: 22094
Strand: Direct
Name: 103485524
Synonym: Sala_0026
Alternate gene names: NA
Gene position: 20688-22094 (Clockwise)
Preceding gene: 103485521
Following gene: 103485528
Centisome position: 0.62
GC content: 66.67
Gene sequence:
>1407_bases GTGCATATCATGGCCGAATCCGCTCCGATCCGCGCTGCCGAGGCGGCCAGCGATCCCGTCGTCCCGGCGCCCGCGCGCCC GCGTTCGGCGGTCAGCGCGGGGGTCGGCCTGGTCGGGCTGGCCGGTCTTTTGACCTATTTGCTGCTCGCGCGCTTCGCGC CCGAGGTCGCCGCCTTTCTGGGGATCGACTGGGGCGACCGGGGGCCGATGAGCGGACCCAATTCGGCGGTCGCCAGCGTG CTCGCCTGCGGCGTGCCGATGGTGCTCTGGTCGGTGTTCGTCGACAAGGTGCACCGCAATCCGTCGACAGGGATCGACTG GGCGCTGCGGCGCCCATGGCGCGACACACTCGACATCAGCCTGACCAAGCTCGCCGGGCTGTGGGCGACCTGGGGGCTGA TCGCGCTGATCTATGGGACGATGCGCTATTATTGGGAGGGCAATTACGCCTTTTCGATGAACCTGCTGGAGCGCGTCGCG CCGTGGCTGCTCCTTGTCTCGGTGCCCTATATGCTGTGGCTCGACCGCCGCATGATCGAGCCGCGCGACGGTTGTTACCA ATTCGGGCGCTGGCTGATCGCGCCCGGCAAACCCGTCGATGGCCGCGCGATCGGCCATCATCTGCGCGCCTGGGCGGTGA AGGGTTTTTTCACCGCCTTCATGCTGTCGATCGTGCCCGGCAATTTTTCGGCGCTCGTCACCGTGCCGATGGCCGAGGTG CTCGCGAACCCCTATCTGACCGGCATCTGGGCGATCAATCTCCTCTATCTCGTCGACGTCCATATCGCGACGGTGGGCTA TATACTGACCTTGAAGCCGCTCGACGCGCATATCCGCACCGCCAACCCCTATGGCATGGCGTGGGTCGCGGCGCTCGTCT GCTATCCGCCCTTCATCCTGATGAGCGGCGGGCCGCTCGATTATCAGGTCCATGGCGCTGACTGGGGGCATTGGCTCGCG GGGCATGACGGCCTGCTGGTCCTCTGGGGGGCGGTGCTGGTGCTGCTGACCGCGGTTTACAGCTGGGCGACGATGGCGTT CGGCATCCGCTTTTCGAACCTGACGCACCGCGGCATCATCACCCACGGCCCCTATGCCTTCACGCGCCATCCCGCCTATG TGGCGAAAAATCTGACCTGGTGGATCGGCGCGCTGCCCTTCCTTGTCACCGCGGGCGGCTGGGTCGAGGCGGCGCGCAAT GTCGTGCTGCTCGGCCTTGTCAGCGGCATTTATTACTGGCGCGCCAAGACCGAGGAAAAGCATCTGCTCGGCGATCCGGC CTATGTCGCCTATTGGAACTGGGCACAGGCGCAGGCGCCGGTACCGCGGCTGATCGCGAAACTGACGGGGCGGGCGCGCC CGTTGGTCCGGCTGGAACCCGACGCGCGGGTGGGGCCGGTGGCCTAG
Upstream 100 bases:
>100_bases GTGTCAACACGGCGGAACGCTGCCAATCTGGCGCGAAATGACGTGCGAATCGGCGGCTTATATTGACGGCTTGCTTACCA ATTTTGGCTAGGGGTAAGCG
Downstream 100 bases:
>100_bases CGCGCCGCTCCAAGATCCTCCCCATCGCAAGTCGATGGGGAGGATCATCGAGGGACGCTCTCCACCCCAAAGCGGCACCC CTCCCCATCGCCGGGCGACG
Product: isoprenylcysteine carboxyl methyltransferase
Products: NA
Alternate protein names: Transmembrane Protein; Protein-S-Isoprenylcysteine Methyltransferase
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MHIMAESAPIRAAEAASDPVVPAPARPRSAVSAGVGLVGLAGLLTYLLLARFAPEVAAFLGIDWGDRGPMSGPNSAVASV LACGVPMVLWSVFVDKVHRNPSTGIDWALRRPWRDTLDISLTKLAGLWATWGLIALIYGTMRYYWEGNYAFSMNLLERVA PWLLLVSVPYMLWLDRRMIEPRDGCYQFGRWLIAPGKPVDGRAIGHHLRAWAVKGFFTAFMLSIVPGNFSALVTVPMAEV LANPYLTGIWAINLLYLVDVHIATVGYILTLKPLDAHIRTANPYGMAWVAALVCYPPFILMSGGPLDYQVHGADWGHWLA GHDGLLVLWGAVLVLLTAVYSWATMAFGIRFSNLTHRGIITHGPYAFTRHPAYVAKNLTWWIGALPFLVTAGGWVEAARN VVLLGLVSGIYYWRAKTEEKHLLGDPAYVAYWNWAQAQAPVPRLIAKLTGRARPLVRLEPDARVGPVA
Sequences:
>Translated_468_residues MHIMAESAPIRAAEAASDPVVPAPARPRSAVSAGVGLVGLAGLLTYLLLARFAPEVAAFLGIDWGDRGPMSGPNSAVASV LACGVPMVLWSVFVDKVHRNPSTGIDWALRRPWRDTLDISLTKLAGLWATWGLIALIYGTMRYYWEGNYAFSMNLLERVA PWLLLVSVPYMLWLDRRMIEPRDGCYQFGRWLIAPGKPVDGRAIGHHLRAWAVKGFFTAFMLSIVPGNFSALVTVPMAEV LANPYLTGIWAINLLYLVDVHIATVGYILTLKPLDAHIRTANPYGMAWVAALVCYPPFILMSGGPLDYQVHGADWGHWLA GHDGLLVLWGAVLVLLTAVYSWATMAFGIRFSNLTHRGIITHGPYAFTRHPAYVAKNLTWWIGALPFLVTAGGWVEAARN VVLLGLVSGIYYWRAKTEEKHLLGDPAYVAYWNWAQAQAPVPRLIAKLTGRARPLVRLEPDARVGPVA >Mature_468_residues MHIMAESAPIRAAEAASDPVVPAPARPRSAVSAGVGLVGLAGLLTYLLLARFAPEVAAFLGIDWGDRGPMSGPNSAVASV LACGVPMVLWSVFVDKVHRNPSTGIDWALRRPWRDTLDISLTKLAGLWATWGLIALIYGTMRYYWEGNYAFSMNLLERVA PWLLLVSVPYMLWLDRRMIEPRDGCYQFGRWLIAPGKPVDGRAIGHHLRAWAVKGFFTAFMLSIVPGNFSALVTVPMAEV LANPYLTGIWAINLLYLVDVHIATVGYILTLKPLDAHIRTANPYGMAWVAALVCYPPFILMSGGPLDYQVHGADWGHWLA GHDGLLVLWGAVLVLLTAVYSWATMAFGIRFSNLTHRGIITHGPYAFTRHPAYVAKNLTWWIGALPFLVTAGGWVEAARN VVLLGLVSGIYYWRAKTEEKHLLGDPAYVAYWNWAQAQAPVPRLIAKLTGRARPLVRLEPDARVGPVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51449; Mature: 51449
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIMAESAPIRAAEAASDPVVPAPARPRSAVSAGVGLVGLAGLLTYLLLARFAPEVAAFL CCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH GIDWGDRGPMSGPNSAVASVLACGVPMVLWSVFVDKVHRNPSTGIDWALRRPWRDTLDIS CCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHH LTKLAGLWATWGLIALIYGTMRYYWEGNYAFSMNLLERVAPWLLLVSVPYMLWLDRRMIE HHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC PRDGCYQFGRWLIAPGKPVDGRAIGHHLRAWAVKGFFTAFMLSIVPGNFSALVTVPMAEV CCHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHH LANPYLTGIWAINLLYLVDVHIATVGYILTLKPLDAHIRTANPYGMAWVAALVCYPPFIL HCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCEEECCCCCHHHHHHHHHHCCCEEE MSGGPLDYQVHGADWGHWLAGHDGLLVLWGAVLVLLTAVYSWATMAFGIRFSNLTHRGII ECCCCCEEEEECCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCE THGPYAFTRHPAYVAKNLTWWIGALPFLVTAGGWVEAARNVVLLGLVSGIYYWRAKTEEK ECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEECCCCCC HLLGDPAYVAYWNWAQAQAPVPRLIAKLTGRARPLVRLEPDARVGPVA CCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCC >Mature Secondary Structure MHIMAESAPIRAAEAASDPVVPAPARPRSAVSAGVGLVGLAGLLTYLLLARFAPEVAAFL CCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH GIDWGDRGPMSGPNSAVASVLACGVPMVLWSVFVDKVHRNPSTGIDWALRRPWRDTLDIS CCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHH LTKLAGLWATWGLIALIYGTMRYYWEGNYAFSMNLLERVAPWLLLVSVPYMLWLDRRMIE HHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC PRDGCYQFGRWLIAPGKPVDGRAIGHHLRAWAVKGFFTAFMLSIVPGNFSALVTVPMAEV CCHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHH LANPYLTGIWAINLLYLVDVHIATVGYILTLKPLDAHIRTANPYGMAWVAALVCYPPFIL HCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCEEECCCCCHHHHHHHHHHCCCEEE MSGGPLDYQVHGADWGHWLAGHDGLLVLWGAVLVLLTAVYSWATMAFGIRFSNLTHRGII ECCCCCEEEEECCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCE THGPYAFTRHPAYVAKNLTWWIGALPFLVTAGGWVEAARNVVLLGLVSGIYYWRAKTEEK ECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEECCCCCC HLLGDPAYVAYWNWAQAQAPVPRLIAKLTGRARPLVRLEPDARVGPVA CCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA