Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485524

Identifier: 103485524

GI number: 103485524

Start: 20688

End: 22094

Strand: Direct

Name: 103485524

Synonym: Sala_0026

Alternate gene names: NA

Gene position: 20688-22094 (Clockwise)

Preceding gene: 103485521

Following gene: 103485528

Centisome position: 0.62

GC content: 66.67

Gene sequence:

>1407_bases
GTGCATATCATGGCCGAATCCGCTCCGATCCGCGCTGCCGAGGCGGCCAGCGATCCCGTCGTCCCGGCGCCCGCGCGCCC
GCGTTCGGCGGTCAGCGCGGGGGTCGGCCTGGTCGGGCTGGCCGGTCTTTTGACCTATTTGCTGCTCGCGCGCTTCGCGC
CCGAGGTCGCCGCCTTTCTGGGGATCGACTGGGGCGACCGGGGGCCGATGAGCGGACCCAATTCGGCGGTCGCCAGCGTG
CTCGCCTGCGGCGTGCCGATGGTGCTCTGGTCGGTGTTCGTCGACAAGGTGCACCGCAATCCGTCGACAGGGATCGACTG
GGCGCTGCGGCGCCCATGGCGCGACACACTCGACATCAGCCTGACCAAGCTCGCCGGGCTGTGGGCGACCTGGGGGCTGA
TCGCGCTGATCTATGGGACGATGCGCTATTATTGGGAGGGCAATTACGCCTTTTCGATGAACCTGCTGGAGCGCGTCGCG
CCGTGGCTGCTCCTTGTCTCGGTGCCCTATATGCTGTGGCTCGACCGCCGCATGATCGAGCCGCGCGACGGTTGTTACCA
ATTCGGGCGCTGGCTGATCGCGCCCGGCAAACCCGTCGATGGCCGCGCGATCGGCCATCATCTGCGCGCCTGGGCGGTGA
AGGGTTTTTTCACCGCCTTCATGCTGTCGATCGTGCCCGGCAATTTTTCGGCGCTCGTCACCGTGCCGATGGCCGAGGTG
CTCGCGAACCCCTATCTGACCGGCATCTGGGCGATCAATCTCCTCTATCTCGTCGACGTCCATATCGCGACGGTGGGCTA
TATACTGACCTTGAAGCCGCTCGACGCGCATATCCGCACCGCCAACCCCTATGGCATGGCGTGGGTCGCGGCGCTCGTCT
GCTATCCGCCCTTCATCCTGATGAGCGGCGGGCCGCTCGATTATCAGGTCCATGGCGCTGACTGGGGGCATTGGCTCGCG
GGGCATGACGGCCTGCTGGTCCTCTGGGGGGCGGTGCTGGTGCTGCTGACCGCGGTTTACAGCTGGGCGACGATGGCGTT
CGGCATCCGCTTTTCGAACCTGACGCACCGCGGCATCATCACCCACGGCCCCTATGCCTTCACGCGCCATCCCGCCTATG
TGGCGAAAAATCTGACCTGGTGGATCGGCGCGCTGCCCTTCCTTGTCACCGCGGGCGGCTGGGTCGAGGCGGCGCGCAAT
GTCGTGCTGCTCGGCCTTGTCAGCGGCATTTATTACTGGCGCGCCAAGACCGAGGAAAAGCATCTGCTCGGCGATCCGGC
CTATGTCGCCTATTGGAACTGGGCACAGGCGCAGGCGCCGGTACCGCGGCTGATCGCGAAACTGACGGGGCGGGCGCGCC
CGTTGGTCCGGCTGGAACCCGACGCGCGGGTGGGGCCGGTGGCCTAG

Upstream 100 bases:

>100_bases
GTGTCAACACGGCGGAACGCTGCCAATCTGGCGCGAAATGACGTGCGAATCGGCGGCTTATATTGACGGCTTGCTTACCA
ATTTTGGCTAGGGGTAAGCG

Downstream 100 bases:

>100_bases
CGCGCCGCTCCAAGATCCTCCCCATCGCAAGTCGATGGGGAGGATCATCGAGGGACGCTCTCCACCCCAAAGCGGCACCC
CTCCCCATCGCCGGGCGACG

Product: isoprenylcysteine carboxyl methyltransferase

Products: NA

Alternate protein names: Transmembrane Protein; Protein-S-Isoprenylcysteine Methyltransferase

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MHIMAESAPIRAAEAASDPVVPAPARPRSAVSAGVGLVGLAGLLTYLLLARFAPEVAAFLGIDWGDRGPMSGPNSAVASV
LACGVPMVLWSVFVDKVHRNPSTGIDWALRRPWRDTLDISLTKLAGLWATWGLIALIYGTMRYYWEGNYAFSMNLLERVA
PWLLLVSVPYMLWLDRRMIEPRDGCYQFGRWLIAPGKPVDGRAIGHHLRAWAVKGFFTAFMLSIVPGNFSALVTVPMAEV
LANPYLTGIWAINLLYLVDVHIATVGYILTLKPLDAHIRTANPYGMAWVAALVCYPPFILMSGGPLDYQVHGADWGHWLA
GHDGLLVLWGAVLVLLTAVYSWATMAFGIRFSNLTHRGIITHGPYAFTRHPAYVAKNLTWWIGALPFLVTAGGWVEAARN
VVLLGLVSGIYYWRAKTEEKHLLGDPAYVAYWNWAQAQAPVPRLIAKLTGRARPLVRLEPDARVGPVA

Sequences:

>Translated_468_residues
MHIMAESAPIRAAEAASDPVVPAPARPRSAVSAGVGLVGLAGLLTYLLLARFAPEVAAFLGIDWGDRGPMSGPNSAVASV
LACGVPMVLWSVFVDKVHRNPSTGIDWALRRPWRDTLDISLTKLAGLWATWGLIALIYGTMRYYWEGNYAFSMNLLERVA
PWLLLVSVPYMLWLDRRMIEPRDGCYQFGRWLIAPGKPVDGRAIGHHLRAWAVKGFFTAFMLSIVPGNFSALVTVPMAEV
LANPYLTGIWAINLLYLVDVHIATVGYILTLKPLDAHIRTANPYGMAWVAALVCYPPFILMSGGPLDYQVHGADWGHWLA
GHDGLLVLWGAVLVLLTAVYSWATMAFGIRFSNLTHRGIITHGPYAFTRHPAYVAKNLTWWIGALPFLVTAGGWVEAARN
VVLLGLVSGIYYWRAKTEEKHLLGDPAYVAYWNWAQAQAPVPRLIAKLTGRARPLVRLEPDARVGPVA
>Mature_468_residues
MHIMAESAPIRAAEAASDPVVPAPARPRSAVSAGVGLVGLAGLLTYLLLARFAPEVAAFLGIDWGDRGPMSGPNSAVASV
LACGVPMVLWSVFVDKVHRNPSTGIDWALRRPWRDTLDISLTKLAGLWATWGLIALIYGTMRYYWEGNYAFSMNLLERVA
PWLLLVSVPYMLWLDRRMIEPRDGCYQFGRWLIAPGKPVDGRAIGHHLRAWAVKGFFTAFMLSIVPGNFSALVTVPMAEV
LANPYLTGIWAINLLYLVDVHIATVGYILTLKPLDAHIRTANPYGMAWVAALVCYPPFILMSGGPLDYQVHGADWGHWLA
GHDGLLVLWGAVLVLLTAVYSWATMAFGIRFSNLTHRGIITHGPYAFTRHPAYVAKNLTWWIGALPFLVTAGGWVEAARN
VVLLGLVSGIYYWRAKTEEKHLLGDPAYVAYWNWAQAQAPVPRLIAKLTGRARPLVRLEPDARVGPVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51449; Mature: 51449

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIMAESAPIRAAEAASDPVVPAPARPRSAVSAGVGLVGLAGLLTYLLLARFAPEVAAFL
CCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
GIDWGDRGPMSGPNSAVASVLACGVPMVLWSVFVDKVHRNPSTGIDWALRRPWRDTLDIS
CCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHH
LTKLAGLWATWGLIALIYGTMRYYWEGNYAFSMNLLERVAPWLLLVSVPYMLWLDRRMIE
HHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PRDGCYQFGRWLIAPGKPVDGRAIGHHLRAWAVKGFFTAFMLSIVPGNFSALVTVPMAEV
CCHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHH
LANPYLTGIWAINLLYLVDVHIATVGYILTLKPLDAHIRTANPYGMAWVAALVCYPPFIL
HCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCEEECCCCCHHHHHHHHHHCCCEEE
MSGGPLDYQVHGADWGHWLAGHDGLLVLWGAVLVLLTAVYSWATMAFGIRFSNLTHRGII
ECCCCCEEEEECCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCE
THGPYAFTRHPAYVAKNLTWWIGALPFLVTAGGWVEAARNVVLLGLVSGIYYWRAKTEEK
ECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEECCCCCC
HLLGDPAYVAYWNWAQAQAPVPRLIAKLTGRARPLVRLEPDARVGPVA
CCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCC
>Mature Secondary Structure
MHIMAESAPIRAAEAASDPVVPAPARPRSAVSAGVGLVGLAGLLTYLLLARFAPEVAAFL
CCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
GIDWGDRGPMSGPNSAVASVLACGVPMVLWSVFVDKVHRNPSTGIDWALRRPWRDTLDIS
CCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHH
LTKLAGLWATWGLIALIYGTMRYYWEGNYAFSMNLLERVAPWLLLVSVPYMLWLDRRMIE
HHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PRDGCYQFGRWLIAPGKPVDGRAIGHHLRAWAVKGFFTAFMLSIVPGNFSALVTVPMAEV
CCHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHH
LANPYLTGIWAINLLYLVDVHIATVGYILTLKPLDAHIRTANPYGMAWVAALVCYPPFIL
HCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCEEECCCCCHHHHHHHHHHCCCEEE
MSGGPLDYQVHGADWGHWLAGHDGLLVLWGAVLVLLTAVYSWATMAFGIRFSNLTHRGII
ECCCCCEEEEECCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCE
THGPYAFTRHPAYVAKNLTWWIGALPFLVTAGGWVEAARNVVLLGLVSGIYYWRAKTEEK
ECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEECCCCCC
HLLGDPAYVAYWNWAQAQAPVPRLIAKLTGRARPLVRLEPDARVGPVA
CCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA