Click here to switch to the map view.

The map label for this gene is ybaA [H]

Identifier: 103485513

GI number: 103485513

Start: 11093

End: 11815

Strand: Reverse

Name: ybaA [H]

Synonym: Sala_0015

Alternate gene names: 103485513

Gene position: 11815-11093 (Counterclockwise)

Preceding gene: 103485514

Following gene: 103485512

Centisome position: 0.35

GC content: 63.62

Gene sequence:

>723_bases
ATGACCTATGTAGAAGGATTTGTGGTCGCGGTGCCGACCGCCAACAAGGACGCCTATCGCAGGCACGCCGCCGATGCGGC
GCCGCTGTTCAGGGAGTTTGGCGTGACGCGGATGGTCGAGGCGTGGGGCGATGACGTGCCCGACGGCAAGGTCAACGATT
TCAAGGGCGCGGTGCAGGCGAAGGCCGACGAGACCGTCGTGTTCAGCTGGTTCGAATATCCCGACAAGCAGGTGCGCGAT
GCCGCCAATGAAAGGATCATGTCCGACCCGCGGATGCAACAGATGGGTAGCGACATGCCGTTCGACGGCAAGCGGATGAT
CGTCGGCGGTTTCGAAACGATCCTCGACGATCGCGGCACCGGCGCCACCGGCTATGTCGACGGCTTTGTCGCCCCCGTCC
CCGATGCCAACAAGGACCGCTATCGCGCGATGGCGAAAATGGCGTCGGAGATATTCATCGAACATGGCGCCACGCGCGTT
GTTGAAAATTGGGGCGACGACGTCCCCGACGGCAAGATCACCGACTATGCCCGCGCCGCGCACAAAAAGGACGGCGAGAC
CGTCGTGTTCAGCTGGGTCGAATGGCCCAGCAGGGAAGCGCGCGACAGCGGCTGGGAAAGGGTGATGGCCGACGAGCGGA
TGAACCCCGGCCCCGAAGAAGAGCGCCCCTTCGACGCCAGGCGCATGATCTATGGCGGCTTCGTCCCGATCGTCGAGGCG
TGA

Upstream 100 bases:

>100_bases
TGCCTTTCGACGTGCGCTCGACGCGCAGCTTGCCGCGTTCCGTGAAGAGGCGGGTCCGCCTGCCTGATTACAGTTTCCTG
CCCCCGAAAGGAGAGAGACG

Downstream 100 bases:

>100_bases
TGCGGTCATCCCCCTGTGGCGCAGCCATGGAGCGGATCAGGAGGAACAATGATGATCAAACTTTACGGAACCCCGCCGAC
CCGCGCCCTGCGCGCGATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MTYVEGFVVAVPTANKDAYRRHAADAAPLFREFGVTRMVEAWGDDVPDGKVNDFKGAVQAKADETVVFSWFEYPDKQVRD
AANERIMSDPRMQQMGSDMPFDGKRMIVGGFETILDDRGTGATGYVDGFVAPVPDANKDRYRAMAKMASEIFIEHGATRV
VENWGDDVPDGKITDYARAAHKKDGETVVFSWVEWPSREARDSGWERVMADERMNPGPEEERPFDARRMIYGGFVPIVEA

Sequences:

>Translated_240_residues
MTYVEGFVVAVPTANKDAYRRHAADAAPLFREFGVTRMVEAWGDDVPDGKVNDFKGAVQAKADETVVFSWFEYPDKQVRD
AANERIMSDPRMQQMGSDMPFDGKRMIVGGFETILDDRGTGATGYVDGFVAPVPDANKDRYRAMAKMASEIFIEHGATRV
VENWGDDVPDGKITDYARAAHKKDGETVVFSWVEWPSREARDSGWERVMADERMNPGPEEERPFDARRMIYGGFVPIVEA
>Mature_239_residues
TYVEGFVVAVPTANKDAYRRHAADAAPLFREFGVTRMVEAWGDDVPDGKVNDFKGAVQAKADETVVFSWFEYPDKQVRDA
ANERIMSDPRMQQMGSDMPFDGKRMIVGGFETILDDRGTGATGYVDGFVAPVPDANKDRYRAMAKMASEIFIEHGATRVV
ENWGDDVPDGKITDYARAAHKKDGETVVFSWVEWPSREARDSGWERVMADERMNPGPEEERPFDARRMIYGGFVPIVEA

Specific function: Unknown

COG id: COG5507

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786661, Length=117, Percent_Identity=67.5213675213675, Blast_Score=171, Evalue=4e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009874 [H]

Pfam domain/function: PF07237 DUF1428 [H]

EC number: NA

Molecular weight: Translated: 26945; Mature: 26814

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYVEGFVVAVPTANKDAYRRHAADAAPLFREFGVTRMVEAWGDDVPDGKVNDFKGAVQA
CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHC
KADETVVFSWFEYPDKQVRDAANERIMSDPRMQQMGSDMPFDGKRMIVGGFETILDDRGT
CCCCEEEEEHHHCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCEEEECHHHHHHCCCCC
GATGYVDGFVAPVPDANKDRYRAMAKMASEIFIEHGATRVVENWGDDVPDGKITDYARAA
CCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHH
HKKDGETVVFSWVEWPSREARDSGWERVMADERMNPGPEEERPFDARRMIYGGFVPIVEA
HCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCEEEECC
>Mature Secondary Structure 
TYVEGFVVAVPTANKDAYRRHAADAAPLFREFGVTRMVEAWGDDVPDGKVNDFKGAVQA
CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHC
KADETVVFSWFEYPDKQVRDAANERIMSDPRMQQMGSDMPFDGKRMIVGGFETILDDRGT
CCCCEEEEEHHHCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCEEEECHHHHHHCCCCC
GATGYVDGFVAPVPDANKDRYRAMAKMASEIFIEHGATRVVENWGDDVPDGKITDYARAA
CCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHH
HKKDGETVVFSWVEWPSREARDSGWERVMADERMNPGPEEERPFDARRMIYGGFVPIVEA
HCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]