| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is gstA [H]
Identifier: 103485512
GI number: 103485512
Start: 10373
End: 11044
Strand: Reverse
Name: gstA [H]
Synonym: Sala_0014
Alternate gene names: 103485512
Gene position: 11044-10373 (Counterclockwise)
Preceding gene: 103485513
Following gene: 103485511
Centisome position: 0.33
GC content: 66.22
Gene sequence:
>672_bases ATGATGATCAAACTTTACGGAACCCCGCCGACCCGCGCCCTGCGCGCGATCTGGCTGCTCAATGAACTCGACCTGCCGCA CGAGATCATCCCGATCGACCTCGGCGCGGGCGAACAGTTGACGCCCGATTTTATGGCGCTCAACCCCGCCGCCAAGCTGC CGGTGCTCGTCGATGGCGCCATGGTGGTCAGCGAATCGGCGGCGATCCAGCTCTATCTCGCCGACAAATATGGCGAACGC TTCCCCGGCGGCGGGCTGATCCCCGCCACTGCCGAAGATCGCGGCCGCATGTATCACTGGCTGTTCTTCCTGATGACCGA GATCGAGGCACCGCTGTGGCGGATCGCGCTCCACAATTTCATCTATGATCCCGAGGAAAAGTCGGAGGCCGAAATCGCGC TGGCGAAGCGCGACGCCGCACGGATGGTTGCAGTGCTCGAACAGCATATGCAGGGGCGCGACGTCCTGGTCGGCGACGCG CTGACGGTGGCCGATTTCAACGCCGCCTTCACGCTCGACTGGGCGCGCGAGGAAGCGCTGCTGGACGATGCCCCGGCGCT CCGCGCCTTTCTGGACCGCATGTACGCGCGGCCCAGGGCGCCGGTGACGATCGCTGCGGCATTTGCGGCGCTGGAGGCGG TGGCCGCCGACGCCGACGGGGCGAGGGCTTGA
Upstream 100 bases:
>100_bases CGACGCCAGGCGCATGATCTATGGCGGCTTCGTCCCGATCGTCGAGGCGTGATGCGGTCATCCCCCTGTGGCGCAGCCAT GGAGCGGATCAGGAGGAACA
Downstream 100 bases:
>100_bases CGATGGGCAGGACCAACGACCGCGTCGACATGCTGAACGTCAACAGCCCGAACCATGTCGTGCGGGTCGAGCGCGTGAAA TATGAGGCGATGCGCGATGC
Product: glutathione S-transferase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MMIKLYGTPPTRALRAIWLLNELDLPHEIIPIDLGAGEQLTPDFMALNPAAKLPVLVDGAMVVSESAAIQLYLADKYGER FPGGGLIPATAEDRGRMYHWLFFLMTEIEAPLWRIALHNFIYDPEEKSEAEIALAKRDAARMVAVLEQHMQGRDVLVGDA LTVADFNAAFTLDWAREEALLDDAPALRAFLDRMYARPRAPVTIAAAFAALEAVAADADGARA
Sequences:
>Translated_223_residues MMIKLYGTPPTRALRAIWLLNELDLPHEIIPIDLGAGEQLTPDFMALNPAAKLPVLVDGAMVVSESAAIQLYLADKYGER FPGGGLIPATAEDRGRMYHWLFFLMTEIEAPLWRIALHNFIYDPEEKSEAEIALAKRDAARMVAVLEQHMQGRDVLVGDA LTVADFNAAFTLDWAREEALLDDAPALRAFLDRMYARPRAPVTIAAAFAALEAVAADADGARA >Mature_223_residues MMIKLYGTPPTRALRAIWLLNELDLPHEIIPIDLGAGEQLTPDFMALNPAAKLPVLVDGAMVVSESAAIQLYLADKYGER FPGGGLIPATAEDRGRMYHWLFFLMTEIEAPLWRIALHNFIYDPEEKSEAEIALAKRDAARMVAVLEQHMQGRDVLVGDA LTVADFNAAFTLDWAREEALLDDAPALRAFLDRMYARPRAPVTIAAAFAALEAVAADADGARA
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788640, Length=205, Percent_Identity=26.3414634146341, Blast_Score=74, Evalue=7e-15, Organism=Drosophila melanogaster, GI19922932, Length=202, Percent_Identity=30.6930693069307, Blast_Score=77, Evalue=8e-15, Organism=Drosophila melanogaster, GI19922160, Length=189, Percent_Identity=29.1005291005291, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI85725204, Length=176, Percent_Identity=30.1136363636364, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI17737923, Length=176, Percent_Identity=30.1136363636364, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI17933730, Length=166, Percent_Identity=32.5301204819277, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24654965, Length=206, Percent_Identity=32.0388349514563, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI19922526, Length=200, Percent_Identity=30, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24654992, Length=171, Percent_Identity=31.5789473684211, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI21686985, Length=173, Percent_Identity=31.2138728323699, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI24654979, Length=205, Percent_Identity=29.7560975609756, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI24654983, Length=173, Percent_Identity=28.3236994219653, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 24488; Mature: 24488
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMIKLYGTPPTRALRAIWLLNELDLPHEIIPIDLGAGEQLTPDFMALNPAAKLPVLVDGA CEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEECCCCCCCEEECCE MVVSESAAIQLYLADKYGERFPGGGLIPATAEDRGRMYHWLFFLMTEIEAPLWRIALHNF EEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH IYDPEEKSEAEIALAKRDAARMVAVLEQHMQGRDVLVGDALTVADFNAAFTLDWAREEAL CCCCCCCCCHHEEHHHHHHHHHHHHHHHHHCCCEEEEECEEEEEECCEEEEEEHHHHHHH LDDAPALRAFLDRMYARPRAPVTIAAAFAALEAVAADADGARA HCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MMIKLYGTPPTRALRAIWLLNELDLPHEIIPIDLGAGEQLTPDFMALNPAAKLPVLVDGA CEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEECCCCCCCEEECCE MVVSESAAIQLYLADKYGERFPGGGLIPATAEDRGRMYHWLFFLMTEIEAPLWRIALHNF EEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH IYDPEEKSEAEIALAKRDAARMVAVLEQHMQGRDVLVGDALTVADFNAAFTLDWAREEAL CCCCCCCCCHHEEHHHHHHHHHHHHHHHHHCCCEEEEECEEEEEECCEEEEEEHHHHHHH LDDAPALRAFLDRMYARPRAPVTIAAAFAALEAVAADADGARA HCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA