| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103485511
Identifier: 103485511
GI number: 103485511
Start: 10071
End: 10370
Strand: Reverse
Name: 103485511
Synonym: Sala_0013
Alternate gene names: NA
Gene position: 10370-10071 (Counterclockwise)
Preceding gene: 103485512
Following gene: 103485510
Centisome position: 0.31
GC content: 69.0
Gene sequence:
>300_bases ATGGGCAGGACCAACGACCGCGTCGACATGCTGAACGTCAACAGCCCGAACCATGTCGTGCGGGTCGAGCGCGTGAAATA TGAGGCGATGCGCGATGCGATGCTGACGGTGGTGCCCACCGAAGCGCCCGGCCTGACCGCCGCCGAGATCAAGGAGCGCC TGCTGCCACTGCTCCCCGAGGTGCTGTTCCCCGGCGGGGCCAAGGCCGGCTGGTGGCAAAAGGGCGTCCAGCTCGACCTC GAGGCGCGCGGGCAGATGGCGCGCTCCGACACCAGGCCGCTGCGCTTCTACCGGCCCTGA
Upstream 100 bases:
>100_bases ACCGCATGTACGCGCGGCCCAGGGCGCCGGTGACGATCGCTGCGGCATTTGCGGCGCTGGAGGCGGTGGCCGCCGACGCC GACGGGGCGAGGGCTTGACG
Downstream 100 bases:
>100_bases GGCTGCATTTCGGAACAGGCTTTTGCAAGGAGAAGAAGGATGACCAATCCCCCAGGCAGCTTCATCTGGTACGAACTGAT GACGAGCGACCCCGACGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MGRTNDRVDMLNVNSPNHVVRVERVKYEAMRDAMLTVVPTEAPGLTAAEIKERLLPLLPEVLFPGGAKAGWWQKGVQLDL EARGQMARSDTRPLRFYRP
Sequences:
>Translated_99_residues MGRTNDRVDMLNVNSPNHVVRVERVKYEAMRDAMLTVVPTEAPGLTAAEIKERLLPLLPEVLFPGGAKAGWWQKGVQLDL EARGQMARSDTRPLRFYRP >Mature_98_residues GRTNDRVDMLNVNSPNHVVRVERVKYEAMRDAMLTVVPTEAPGLTAAEIKERLLPLLPEVLFPGGAKAGWWQKGVQLDLE ARGQMARSDTRPLRFYRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11200; Mature: 11069
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRTNDRVDMLNVNSPNHVVRVERVKYEAMRDAMLTVVPTEAPGLTAAEIKERLLPLLPE CCCCCCCEEEEECCCCCCEEEHHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHHHHH VLFPGGAKAGWWQKGVQLDLEARGQMARSDTRPLRFYRP HHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEECC >Mature Secondary Structure GRTNDRVDMLNVNSPNHVVRVERVKYEAMRDAMLTVVPTEAPGLTAAEIKERLLPLLPE CCCCCCEEEEECCCCCCEEEHHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHHHHH VLFPGGAKAGWWQKGVQLDLEARGQMARSDTRPLRFYRP HHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA