| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is yibF [C]
Identifier: 103485507
GI number: 103485507
Start: 7591
End: 8253
Strand: Reverse
Name: yibF [C]
Synonym: Sala_0009
Alternate gene names: 103485507
Gene position: 8253-7591 (Counterclockwise)
Preceding gene: 103485508
Following gene: 103485506
Centisome position: 0.25
GC content: 60.94
Gene sequence:
>663_bases ATGACCCTGATCTTCTATGGCCACCCCTTCTCTTCATACACGTGGAAGGCACTGATCGCGCTGTACGAAAAGGGTATCGA TTTCGACTATCGCGCACTCGAAACCGAAGCCCCCTTCACTCATTATGACGAACTGCGGGCCCATTGGCCGGTGGGACAGT TTCCCCTGATCGTCCATGACGGGCAGGCGCTGTTCGAATCGAGCATCATCATCGAGTATCTCGACCAGATTGTCCCCGAA CCGTGCATGGTTGCCGCCGATCCGAAGGTGGCGCTCGACGTGCGGTTTCTGGACCGGATATTCGACAATCATTTTCAGGC GCGTTTTCAGGCCGTGGTCGCCGAATATCTGCCGTTCATCACGGCAACGCCCGATCTTGCCCGCGTCGAGCGCGCGCGCG ATCTGCTCGAAAAAGCCTATGGCTGGCTCGAGACCAGGCTGCCCAACGACGGCTGGGCCACGCCGCACGGCTTTTCGTTG GCCGACTGCGCCGCGGCGCCCGCGCTTTTCTATGCCGACTGGGTTCACCCGATCGATCCGCGCCATGTCAGGGTGCGTGC GTATCGTGCGCGTCTGAACGCACGGCCCAGCGTCGCGCGTTGTATCGAGGAAGCACGTCCCTATCGCGCTTTCTTCCCGC TTGGCGCGCCCGACCGCGATTAA
Upstream 100 bases:
>100_bases CCTTTCCGCCCGCCGACCCCGCGCAGGGGCTGATCGCGCTCTTGCCACATATCATGTTCGTCGGCTGGCCGCTCGCCTGG ATGAAGCGAAAGGAACGTCG
Downstream 100 bases:
>100_bases ACGTCCCGCAACGGGGTTAACGCGGCGCTGACGCTGCCGCTTTGCCAATTGGTCATCGCGGGCGCGCGAAGGCTGGGGCA TGGCTTCGCCGTCTGCCCTG
Product: glutathione S-transferase-like protein
Products: NA
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase Domain; Glutathione S-Transferase-Like; Glutathione S-Transferase Family Protein; Glutathione S-Transferase Ta Family; Stringent Starvation Protein A; Glutathione S-Transferase C-Terminal Domain Protein
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MTLIFYGHPFSSYTWKALIALYEKGIDFDYRALETEAPFTHYDELRAHWPVGQFPLIVHDGQALFESSIIIEYLDQIVPE PCMVAADPKVALDVRFLDRIFDNHFQARFQAVVAEYLPFITATPDLARVERARDLLEKAYGWLETRLPNDGWATPHGFSL ADCAAAPALFYADWVHPIDPRHVRVRAYRARLNARPSVARCIEEARPYRAFFPLGAPDRD
Sequences:
>Translated_220_residues MTLIFYGHPFSSYTWKALIALYEKGIDFDYRALETEAPFTHYDELRAHWPVGQFPLIVHDGQALFESSIIIEYLDQIVPE PCMVAADPKVALDVRFLDRIFDNHFQARFQAVVAEYLPFITATPDLARVERARDLLEKAYGWLETRLPNDGWATPHGFSL ADCAAAPALFYADWVHPIDPRHVRVRAYRARLNARPSVARCIEEARPYRAFFPLGAPDRD >Mature_219_residues TLIFYGHPFSSYTWKALIALYEKGIDFDYRALETEAPFTHYDELRAHWPVGQFPLIVHDGQALFESSIIIEYLDQIVPEP CMVAADPKVALDVRFLDRIFDNHFQARFQAVVAEYLPFITATPDLARVERARDLLEKAYGWLETRLPNDGWATPHGFSLA DCAAAPALFYADWVHPIDPRHVRVRAYRARLNARPSVARCIEEARPYRAFFPLGAPDRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25297; Mature: 25166
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLIFYGHPFSSYTWKALIALYEKGIDFDYRALETEAPFTHYDELRAHWPVGQFPLIVHD CEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHCCCCCCCCEEEEC GQALFESSIIIEYLDQIVPEPCMVAADPKVALDVRFLDRIFDNHFQARFQAVVAEYLPFI CHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH TATPDLARVERARDLLEKAYGWLETRLPNDGWATPHGFSLADCAAAPALFYADWVHPIDP CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC RHVRVRAYRARLNARPSVARCIEEARPYRAFFPLGAPDRD CHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCCCCCC >Mature Secondary Structure TLIFYGHPFSSYTWKALIALYEKGIDFDYRALETEAPFTHYDELRAHWPVGQFPLIVHD EEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHCCCCCCCCEEEEC GQALFESSIIIEYLDQIVPEPCMVAADPKVALDVRFLDRIFDNHFQARFQAVVAEYLPFI CHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH TATPDLARVERARDLLEKAYGWLETRLPNDGWATPHGFSLADCAAAPALFYADWVHPIDP CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC RHVRVRAYRARLNARPSVARCIEEARPYRAFFPLGAPDRD CHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA