Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is yibF [C]

Identifier: 103485507

GI number: 103485507

Start: 7591

End: 8253

Strand: Reverse

Name: yibF [C]

Synonym: Sala_0009

Alternate gene names: 103485507

Gene position: 8253-7591 (Counterclockwise)

Preceding gene: 103485508

Following gene: 103485506

Centisome position: 0.25

GC content: 60.94

Gene sequence:

>663_bases
ATGACCCTGATCTTCTATGGCCACCCCTTCTCTTCATACACGTGGAAGGCACTGATCGCGCTGTACGAAAAGGGTATCGA
TTTCGACTATCGCGCACTCGAAACCGAAGCCCCCTTCACTCATTATGACGAACTGCGGGCCCATTGGCCGGTGGGACAGT
TTCCCCTGATCGTCCATGACGGGCAGGCGCTGTTCGAATCGAGCATCATCATCGAGTATCTCGACCAGATTGTCCCCGAA
CCGTGCATGGTTGCCGCCGATCCGAAGGTGGCGCTCGACGTGCGGTTTCTGGACCGGATATTCGACAATCATTTTCAGGC
GCGTTTTCAGGCCGTGGTCGCCGAATATCTGCCGTTCATCACGGCAACGCCCGATCTTGCCCGCGTCGAGCGCGCGCGCG
ATCTGCTCGAAAAAGCCTATGGCTGGCTCGAGACCAGGCTGCCCAACGACGGCTGGGCCACGCCGCACGGCTTTTCGTTG
GCCGACTGCGCCGCGGCGCCCGCGCTTTTCTATGCCGACTGGGTTCACCCGATCGATCCGCGCCATGTCAGGGTGCGTGC
GTATCGTGCGCGTCTGAACGCACGGCCCAGCGTCGCGCGTTGTATCGAGGAAGCACGTCCCTATCGCGCTTTCTTCCCGC
TTGGCGCGCCCGACCGCGATTAA

Upstream 100 bases:

>100_bases
CCTTTCCGCCCGCCGACCCCGCGCAGGGGCTGATCGCGCTCTTGCCACATATCATGTTCGTCGGCTGGCCGCTCGCCTGG
ATGAAGCGAAAGGAACGTCG

Downstream 100 bases:

>100_bases
ACGTCCCGCAACGGGGTTAACGCGGCGCTGACGCTGCCGCTTTGCCAATTGGTCATCGCGGGCGCGCGAAGGCTGGGGCA
TGGCTTCGCCGTCTGCCCTG

Product: glutathione S-transferase-like protein

Products: NA

Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase Domain; Glutathione S-Transferase-Like; Glutathione S-Transferase Family Protein; Glutathione S-Transferase Ta Family; Stringent Starvation Protein A; Glutathione S-Transferase C-Terminal Domain Protein

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MTLIFYGHPFSSYTWKALIALYEKGIDFDYRALETEAPFTHYDELRAHWPVGQFPLIVHDGQALFESSIIIEYLDQIVPE
PCMVAADPKVALDVRFLDRIFDNHFQARFQAVVAEYLPFITATPDLARVERARDLLEKAYGWLETRLPNDGWATPHGFSL
ADCAAAPALFYADWVHPIDPRHVRVRAYRARLNARPSVARCIEEARPYRAFFPLGAPDRD

Sequences:

>Translated_220_residues
MTLIFYGHPFSSYTWKALIALYEKGIDFDYRALETEAPFTHYDELRAHWPVGQFPLIVHDGQALFESSIIIEYLDQIVPE
PCMVAADPKVALDVRFLDRIFDNHFQARFQAVVAEYLPFITATPDLARVERARDLLEKAYGWLETRLPNDGWATPHGFSL
ADCAAAPALFYADWVHPIDPRHVRVRAYRARLNARPSVARCIEEARPYRAFFPLGAPDRD
>Mature_219_residues
TLIFYGHPFSSYTWKALIALYEKGIDFDYRALETEAPFTHYDELRAHWPVGQFPLIVHDGQALFESSIIIEYLDQIVPEP
CMVAADPKVALDVRFLDRIFDNHFQARFQAVVAEYLPFITATPDLARVERARDLLEKAYGWLETRLPNDGWATPHGFSLA
DCAAAPALFYADWVHPIDPRHVRVRAYRARLNARPSVARCIEEARPYRAFFPLGAPDRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25297; Mature: 25166

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLIFYGHPFSSYTWKALIALYEKGIDFDYRALETEAPFTHYDELRAHWPVGQFPLIVHD
CEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHCCCCCCCCEEEEC
GQALFESSIIIEYLDQIVPEPCMVAADPKVALDVRFLDRIFDNHFQARFQAVVAEYLPFI
CHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TATPDLARVERARDLLEKAYGWLETRLPNDGWATPHGFSLADCAAAPALFYADWVHPIDP
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
RHVRVRAYRARLNARPSVARCIEEARPYRAFFPLGAPDRD
CHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCCCCCC
>Mature Secondary Structure 
TLIFYGHPFSSYTWKALIALYEKGIDFDYRALETEAPFTHYDELRAHWPVGQFPLIVHD
EEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHCCCCCCCCEEEEC
GQALFESSIIIEYLDQIVPEPCMVAADPKVALDVRFLDRIFDNHFQARFQAVVAEYLPFI
CHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TATPDLARVERARDLLEKAYGWLETRLPNDGWATPHGFSLADCAAAPALFYADWVHPIDP
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
RHVRVRAYRARLNARPSVARCIEEARPYRAFFPLGAPDRD
CHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA