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The map label for this gene is ydjR [C]

Identifier: 99082842

GI number: 99082842

Start: 3170058

End: 3170588

Strand: Direct

Name: ydjR [C]

Synonym: TM1040_3002

Alternate gene names: 99082842

Gene position: 3170058-3170588 (Clockwise)

Preceding gene: 99082840

Following gene: 99082844

Centisome position: 99.04

GC content: 60.64

Gene sequence:

>531_bases
ATGCGCTTTGACGCTGCTGAGATCAGACCGGCGCCATGGAAAAACGGCGGAGGAACGACCCGCGAGCTTGCAGTAGGCCA
GGATGTGAGCGGACAGATCTGGCGTTTGAGCCTCGCAGAGATTGCGCGCGAGGGCCCGTTTTCTTCCTTTGCGGGCCAAT
GGCGCATTCACACCATCATATCGGGACAGGGGCTGCGGCTGATGGGCACTGAGGAAACGCTTGAGGCCCTGCCGCTTGCG
CCCTTGGAGTTTGACGGTGGGATCGCGCTTGATGCGCAGTTTATTGAGGGGCCATGTCGCGCGGTCAATCTGATCTATGA
TCCTCGGCACCTCGCAGCCACAGCAGAGGTGCGCAATGGGTCCTTACGGGCGCAGCGCGGCGATTTGGTCTTTGTGATCA
GGGGGGCGCTGACCCTCGGTGGTAAAAATTTTGTCGCCGGGCAGGGGGCCGCGGTAGAAGCACCAGCCCGAGCAGAGGTC
GAGGGCACGGTGCTTCATTTCGAGATTAGAGTTCCGCCAAAAGAGACGTGA

Upstream 100 bases:

>100_bases
GGTTTTCTTCTGTTGTTGCACTTCAGGGCTCCGGGCTGAATAATAACTCTGGCTAAATCATATTATGTCTGCATTAAAAT
GCAGTTGTAAAGGAGAGTGC

Downstream 100 bases:

>100_bases
TCGCCTTGCGATAGCTGGCAAGAATGCTGTCTCGCGCGATGTGACGACCTGTTTGTACCATATGACGCCCTGCGGCCCAG
ACGTCGGTGACGCTATGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MRFDAAEIRPAPWKNGGGTTRELAVGQDVSGQIWRLSLAEIAREGPFSSFAGQWRIHTIISGQGLRLMGTEETLEALPLA
PLEFDGGIALDAQFIEGPCRAVNLIYDPRHLAATAEVRNGSLRAQRGDLVFVIRGALTLGGKNFVAGQGAAVEAPARAEV
EGTVLHFEIRVPPKET

Sequences:

>Translated_176_residues
MRFDAAEIRPAPWKNGGGTTRELAVGQDVSGQIWRLSLAEIAREGPFSSFAGQWRIHTIISGQGLRLMGTEETLEALPLA
PLEFDGGIALDAQFIEGPCRAVNLIYDPRHLAATAEVRNGSLRAQRGDLVFVIRGALTLGGKNFVAGQGAAVEAPARAEV
EGTVLHFEIRVPPKET
>Mature_176_residues
MRFDAAEIRPAPWKNGGGTTRELAVGQDVSGQIWRLSLAEIAREGPFSSFAGQWRIHTIISGQGLRLMGTEETLEALPLA
PLEFDGGIALDAQFIEGPCRAVNLIYDPRHLAATAEVRNGSLRAQRGDLVFVIRGALTLGGKNFVAGQGAAVEAPARAEV
EGTVLHFEIRVPPKET

Specific function: Unknown

COG id: COG3758

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ydjR [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR010282 [H]

Pfam domain/function: PF05962 HutD [H]

EC number: NA

Molecular weight: Translated: 18898; Mature: 18898

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFDAAEIRPAPWKNGGGTTRELAVGQDVSGQIWRLSLAEIAREGPFSSFAGQWRIHTII
CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEHHHHHHCCCCCCCCCCEEEEEEE
SGQGLRLMGTEETLEALPLAPLEFDGGIALDAQFIEGPCRAVNLIYDPRHLAATAEVRNG
CCCCEEEEECHHHHHHCCCCCEECCCCEEEEHHHHCCCCEEEEEEECCCHHEEEEEECCC
SLRAQRGDLVFVIRGALTLGGKNFVAGQGAAVEAPARAEVEGTVLHFEIRVPPKET
EEEEECCCEEEEEEEEEEECCCEEECCCCCEECCCCCCCEEEEEEEEEEECCCCCC
>Mature Secondary Structure
MRFDAAEIRPAPWKNGGGTTRELAVGQDVSGQIWRLSLAEIAREGPFSSFAGQWRIHTII
CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEHHHHHHCCCCCCCCCCEEEEEEE
SGQGLRLMGTEETLEALPLAPLEFDGGIALDAQFIEGPCRAVNLIYDPRHLAATAEVRNG
CCCCEEEEECHHHHHHCCCCCEECCCCEEEEHHHHCCCCEEEEEEECCCHHEEEEEECCC
SLRAQRGDLVFVIRGALTLGGKNFVAGQGAAVEAPARAEVEGTVLHFEIRVPPKET
EEEEECCCEEEEEEEEEEECCCEEECCCCCEECCCCCCCEEEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2203753 [H]