| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is hutI
Identifier: 99082844
GI number: 99082844
Start: 3172003
End: 3173220
Strand: Direct
Name: hutI
Synonym: TM1040_3004
Alternate gene names: 99082844
Gene position: 3172003-3173220 (Clockwise)
Preceding gene: 99082842
Following gene: 99082845
Centisome position: 99.1
GC content: 62.89
Gene sequence:
>1218_bases ATGCGCGATACATACGTGTTGAGCGGTGCTCGGTTGGCGACCATGGAGGCCGAGGGGTCTTATGGGCTTGTGGAAGACGG GGCGATCGCCATTCAGGGGGATGAAATTCTCTGGTGCGGCGCGCGGGGCGCGCTACCGGACACCTACGCAGCTTGCCCCA GCACCGACCTCAATGGACGTCTGGTCACGCCGGCCTTCATTGATTGTCACACGCACATCGTTTTTGGCGGAGACCGTGCG GGCGAGTTCGAGATGCGCCTCGAGGGGGCAACCTATGAAGAGGTGGCCAAGGCTGGCGGCGGGATTGTGTCGACCGTCAC GGCCACGCGTGCCGCAAGCCTGGATGCGCTTGTGACCGGGGCCTTGCCGCGGCTGGATGCACTGATTGCGGAAGGGGTGA GCACGGTAGAAGTCAAATCCGGCTACGGGCTCGACCGCGAGACCGAGCTCAATATGCTGCGCGCGGCGCGTCGTCTGGCT GAGCACAGAGATGTTACGGTCAAAACCACCTTTCTGGGCGCGCATGCAGTCCCTGCAGAGTATGCGGGTCGGGCAGATGC CTATCTTGATGAGGTCTGCCTGCCGACGCTGCGCGCAGCGCATGCCGAGGGGTTGGTCGATGCGGTAGATGGCTTTTGTG AAGGGATCGCTTTTTCGGCGGCGCAGATCGCAAAGGTTTTTGACGTGGCAGCAGAGTTGGGTTTGCCGGTGAAGCTCCAT GCCGAACAGCTGTCGCATCAGGGCGGCACCAAATTGGCGGCAGAGCGCGGCGCACTGTCTGTGGATCATGTGGAATACGC CACAGAAGCGGACGCACGGGCAATGGCGGCTTCGGGGTCCGTTGCGGTCCTGTTGCCCGGCGCGTTCTACACAATCCGCG AAACGCAAGTCCCGCCCGTGGCAGAGTTTCGCATGCATGGCGTGCCGATGGCACTGGCGACAGACTGCAACCCCGGATCA TCGCCGCTCACGTCGCTTCTGCTGACGCTCAATATGGGCTGCACATTGTTTCGCCTGACCCCGGAAGAGGCGCTTGCGGG TGTGACCCGTAATGCCGCCCGCGCGCTGGGCATGCAGGATCGTGGGCGCATCGCCCCCGGGCTTCGTGCGGATCTGGCGG TCTGGGATGTCTCTCGCCCGGCAGAGCTGGCTTATCGCATTGGTTTCAACCCGCTCTACGCGCGTGTCATGGGCGGCAAA ATGGAGGTTCGTACATGA
Upstream 100 bases:
>100_bases CGGTGGCGGCAAAAATTGTCTGCATCTGGCCCTCTTATGTATAGACATAACAACAATAAGCGCATACCGTTAATGGGGCA AGAGGATTCTGGGGGACGAA
Downstream 100 bases:
>100_bases TCGAGATGATCCCGGGCGCCGTGACGCTCGACACTTTGGAACGGATCTGGCGTCACGGCACGCCTGCACGTCTGGCCGAT AGCGCGCGTGCAGGTGTCGA
Product: imidazolonepropionase
Products: NA
Alternate protein names: Imidazolone-5-propionate hydrolase
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MRDTYVLSGARLATMEAEGSYGLVEDGAIAIQGDEILWCGARGALPDTYAACPSTDLNGRLVTPAFIDCHTHIVFGGDRA GEFEMRLEGATYEEVAKAGGGIVSTVTATRAASLDALVTGALPRLDALIAEGVSTVEVKSGYGLDRETELNMLRAARRLA EHRDVTVKTTFLGAHAVPAEYAGRADAYLDEVCLPTLRAAHAEGLVDAVDGFCEGIAFSAAQIAKVFDVAAELGLPVKLH AEQLSHQGGTKLAAERGALSVDHVEYATEADARAMAASGSVAVLLPGAFYTIRETQVPPVAEFRMHGVPMALATDCNPGS SPLTSLLLTLNMGCTLFRLTPEEALAGVTRNAARALGMQDRGRIAPGLRADLAVWDVSRPAELAYRIGFNPLYARVMGGK MEVRT
Sequences:
>Translated_405_residues MRDTYVLSGARLATMEAEGSYGLVEDGAIAIQGDEILWCGARGALPDTYAACPSTDLNGRLVTPAFIDCHTHIVFGGDRA GEFEMRLEGATYEEVAKAGGGIVSTVTATRAASLDALVTGALPRLDALIAEGVSTVEVKSGYGLDRETELNMLRAARRLA EHRDVTVKTTFLGAHAVPAEYAGRADAYLDEVCLPTLRAAHAEGLVDAVDGFCEGIAFSAAQIAKVFDVAAELGLPVKLH AEQLSHQGGTKLAAERGALSVDHVEYATEADARAMAASGSVAVLLPGAFYTIRETQVPPVAEFRMHGVPMALATDCNPGS SPLTSLLLTLNMGCTLFRLTPEEALAGVTRNAARALGMQDRGRIAPGLRADLAVWDVSRPAELAYRIGFNPLYARVMGGK MEVRT >Mature_405_residues MRDTYVLSGARLATMEAEGSYGLVEDGAIAIQGDEILWCGARGALPDTYAACPSTDLNGRLVTPAFIDCHTHIVFGGDRA GEFEMRLEGATYEEVAKAGGGIVSTVTATRAASLDALVTGALPRLDALIAEGVSTVEVKSGYGLDRETELNMLRAARRLA EHRDVTVKTTFLGAHAVPAEYAGRADAYLDEVCLPTLRAAHAEGLVDAVDGFCEGIAFSAAQIAKVFDVAAELGLPVKLH AEQLSHQGGTKLAAERGALSVDHVEYATEADARAMAASGSVAVLLPGAFYTIRETQVPPVAEFRMHGVPMALATDCNPGS SPLTSLLLTLNMGCTLFRLTPEEALAGVTRNAARALGMQDRGRIAPGLRADLAVWDVSRPAELAYRIGFNPLYARVMGGK MEVRT
Specific function: Unknown
COG id: COG1228
COG function: function code Q; Imidazolonepropionase and related amidohydrolases
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hutI family
Homologues:
Organism=Homo sapiens, GI223972677, Length=337, Percent_Identity=36.2017804154303, Blast_Score=184, Evalue=2e-46, Organism=Caenorhabditis elegans, GI17555004, Length=352, Percent_Identity=34.9431818181818, Blast_Score=188, Evalue=3e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HUTI_SILST (Q1GC80)
Other databases:
- EMBL: CP000377 - RefSeq: YP_614998.1 - ProteinModelPortal: Q1GC80 - SMR: Q1GC80 - STRING: Q1GC80 - GeneID: 4078034 - GenomeReviews: CP000377_GR - KEGG: sit:TM1040_3004 - NMPDR: fig|292414.1.peg.1027 - eggNOG: COG1228 - HOGENOM: HBG686142 - OMA: MNMACTL - ProtClustDB: PRK09356 - BioCyc: SSP292414:TM1040_3004-MONOMER - GO: GO:0005737 - HAMAP: MF_00372 - InterPro: IPR006680 - InterPro: IPR005920 - InterPro: IPR011059 - TIGRFAMs: TIGR01224
Pfam domain/function: PF01979 Amidohydro_1; SSF51338 Metalo_hydrolase
EC number: =3.5.2.7
Molecular weight: Translated: 42718; Mature: 42718
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: BINDING 79-79 BINDING 92-92 BINDING 142-142 BINDING 175-175 BINDING 243-243
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDTYVLSGARLATMEAEGSYGLVEDGAIAIQGDEILWCGARGALPDTYAACPSTDLNGR CCCCEEECCCEEEEEECCCCCCEEECCEEEEECCEEEEECCCCCCCCCHHCCCCCCCCCE LVTPAFIDCHTHIVFGGDRAGEFEMRLEGATYEEVAKAGGGIVSTVTATRAASLDALVTG ECCCEEEEEEEEEEECCCCCCCEEEEECCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHC ALPRLDALIAEGVSTVEVKSGYGLDRETELNMLRAARRLAEHRDVTVKTTFLGAHAVPAE CHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCHH YAGRADAYLDEVCLPTLRAAHAEGLVDAVDGFCEGIAFSAAQIAKVFDVAAELGLPVKLH HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE AEQLSHQGGTKLAAERGALSVDHVEYATEADARAMAASGSVAVLLPGAFYTIRETQVPPV HHHHCCCCCCEEHHHCCCCEEHHHHHHHCCCHHHHCCCCCEEEEECCCEEEEECCCCCCH AEFRMHGVPMALATDCNPGSSPLTSLLLTLNMGCTLFRLTPEEALAGVTRNAARALGMQD HHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHCCCCC RGRIAPGLRADLAVWDVSRPAELAYRIGFNPLYARVMGGKMEVRT CCCCCCCCCCCEEEEECCCHHHHHEECCCCHHHHHHCCCEEEECC >Mature Secondary Structure MRDTYVLSGARLATMEAEGSYGLVEDGAIAIQGDEILWCGARGALPDTYAACPSTDLNGR CCCCEEECCCEEEEEECCCCCCEEECCEEEEECCEEEEECCCCCCCCCHHCCCCCCCCCE LVTPAFIDCHTHIVFGGDRAGEFEMRLEGATYEEVAKAGGGIVSTVTATRAASLDALVTG ECCCEEEEEEEEEEECCCCCCCEEEEECCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHC ALPRLDALIAEGVSTVEVKSGYGLDRETELNMLRAARRLAEHRDVTVKTTFLGAHAVPAE CHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCHH YAGRADAYLDEVCLPTLRAAHAEGLVDAVDGFCEGIAFSAAQIAKVFDVAAELGLPVKLH HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE AEQLSHQGGTKLAAERGALSVDHVEYATEADARAMAASGSVAVLLPGAFYTIRETQVPPV HHHHCCCCCCEEHHHCCCCEEHHHHHHHCCCHHHHCCCCCEEEEECCCEEEEECCCCCCH AEFRMHGVPMALATDCNPGSSPLTSLLLTLNMGCTLFRLTPEEALAGVTRNAARALGMQD HHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHCCCCC RGRIAPGLRADLAVWDVSRPAELAYRIGFNPLYARVMGGKMEVRT CCCCCCCCCCCEEEEECCCHHHHHEECCCCHHHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA