| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is glnH [H]
Identifier: 99082838
GI number: 99082838
Start: 3166064
End: 3167128
Strand: Direct
Name: glnH [H]
Synonym: TM1040_2998
Alternate gene names: 99082838
Gene position: 3166064-3167128 (Clockwise)
Preceding gene: 99082837
Following gene: 99082840
Centisome position: 98.91
GC content: 57.09
Gene sequence:
>1065_bases ATGACCCTGCGCTCTATTTGGTTTTGTCTTGTCACAGTGTTGATGACCCTTCCAGCCTTGCCGCTGCGCGCGCAGGAACT GGTGGTCAACACGGTTACCCGTCCGCCGTTTTCAATGCCGGTCGGAGAGCATGAGACGGGTTTTACCATGGATTTGATCC GCGAGGTCTCGCAACGCCTCGGTTGGGACATCCAGATCAATCGGGTCGATAACTTTGCGCAGATGCTCGAAGAGGTCGAA CGCGGCGAGGCCGATATGGCGGCGGCAAACATCTCCATCACGGCCGGGCGTGAAGCGGTAATGGATTTCAGTCAGCCCAT CTTTGAAAGCGGCCTGCAGATCATGCTGCATCAGGACGATGTGTCAGAGCCAAGCCTGATTTCGGCGCTGATGTCGTGGG ATCTCTTCGCGGCCATCGCAATCGCATTTGTGCTCTTGCTGGTGGGCGGCATGCTTATGTGGGTGTTTGAGCGCCGAGCG CAGCCCTATTTTGATCGCCCGTTGAAAGATGCGTGGTTCCCATCTTTCTGGTGGGCTCTCAATCTGGTGGTGAACGGTGG TTTTGAAGAGCGGGTGCCGCGCAGCGCGCTTGGGCGGGTTTTTGGTGTTCTGCTGGTTCTCTCATCATTGTTCGTGGTGT CGGTCTTTGTCGCCAAAATCACCGCCGCCATGACCGTCGAGGCGATCAACGGGTCGGTGAATTCGGTGAACGACCTCTAC GGCAAGCGCGTCGGCACGATCCAGGGCTCCACCGCGGCAGGATTTCTGGATCGTCGTGAAATCGACTATGTGGCGTTTCC GGGGCTCGATAAGATGCTCGAGGACTTTGAAGACGGCGATACGCGCATAGTCGTGTTTGATGCGCCGGTGCTCAACCACT ACGTCAAAACCGACGGTGCGGGGATCGGGCATGTGATGGGGCGGAAGTTCCTGACGGAATACTACGGGATTATCTTCCCG CAGGGGTCCGACATGGTGGAGCCGTTCAATCGTGCCTTGCTGAAGATGCAGGAAGACGGCGCCTACGAGACGCTCTATCG AAAGTGGTTTGGTCAGAGTTTCTAG
Upstream 100 bases:
>100_bases GCAATCCTTGCAGAACATCGCACCGCCTGAGCACTGAGGACTTGAAAAAATCCCCGTAGCCCTTCTAAGCAGTCTCACCG TTTCTAGTGAGAACCGCTCC
Downstream 100 bases:
>100_bases ACCCTGATTGGATCTTTTGACCCACGCCAGCGATTTCTGAGCAAGCGCGGGTTAATGCGGGGCGCTGTTTTCGTCCACCG CGCTCAATTCATCACCAAAG
Product: extracellular solute-binding protein
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: GlnBP [H]
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MTLRSIWFCLVTVLMTLPALPLRAQELVVNTVTRPPFSMPVGEHETGFTMDLIREVSQRLGWDIQINRVDNFAQMLEEVE RGEADMAAANISITAGREAVMDFSQPIFESGLQIMLHQDDVSEPSLISALMSWDLFAAIAIAFVLLLVGGMLMWVFERRA QPYFDRPLKDAWFPSFWWALNLVVNGGFEERVPRSALGRVFGVLLVLSSLFVVSVFVAKITAAMTVEAINGSVNSVNDLY GKRVGTIQGSTAAGFLDRREIDYVAFPGLDKMLEDFEDGDTRIVVFDAPVLNHYVKTDGAGIGHVMGRKFLTEYYGIIFP QGSDMVEPFNRALLKMQEDGAYETLYRKWFGQSF
Sequences:
>Translated_354_residues MTLRSIWFCLVTVLMTLPALPLRAQELVVNTVTRPPFSMPVGEHETGFTMDLIREVSQRLGWDIQINRVDNFAQMLEEVE RGEADMAAANISITAGREAVMDFSQPIFESGLQIMLHQDDVSEPSLISALMSWDLFAAIAIAFVLLLVGGMLMWVFERRA QPYFDRPLKDAWFPSFWWALNLVVNGGFEERVPRSALGRVFGVLLVLSSLFVVSVFVAKITAAMTVEAINGSVNSVNDLY GKRVGTIQGSTAAGFLDRREIDYVAFPGLDKMLEDFEDGDTRIVVFDAPVLNHYVKTDGAGIGHVMGRKFLTEYYGIIFP QGSDMVEPFNRALLKMQEDGAYETLYRKWFGQSF >Mature_353_residues TLRSIWFCLVTVLMTLPALPLRAQELVVNTVTRPPFSMPVGEHETGFTMDLIREVSQRLGWDIQINRVDNFAQMLEEVER GEADMAAANISITAGREAVMDFSQPIFESGLQIMLHQDDVSEPSLISALMSWDLFAAIAIAFVLLLVGGMLMWVFERRAQ PYFDRPLKDAWFPSFWWALNLVVNGGFEERVPRSALGRVFGVLLVLSSLFVVSVFVAKITAAMTVEAINGSVNSVNDLYG KRVGTIQGSTAAGFLDRREIDYVAFPGLDKMLEDFEDGDTRIVVFDAPVLNHYVKTDGAGIGHVMGRKFLTEYYGIIFPQ GSDMVEPFNRALLKMQEDGAYETLYRKWFGQSF
Specific function: Involved in a glutamine-transport system glnHPQ [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Homo sapiens, GI74275354, Length=406, Percent_Identity=24.8768472906404, Blast_Score=105, Evalue=4e-23, Organism=Homo sapiens, GI134304851, Length=406, Percent_Identity=24.8768472906404, Blast_Score=105, Evalue=5e-23, Organism=Homo sapiens, GI163659856, Length=376, Percent_Identity=25.531914893617, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI167001419, Length=373, Percent_Identity=24.6648793565684, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI134304848, Length=406, Percent_Identity=24.6305418719212, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI167001484, Length=373, Percent_Identity=24.6648793565684, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI164419734, Length=379, Percent_Identity=24.802110817942, Blast_Score=102, Evalue=5e-22, Organism=Homo sapiens, GI163659858, Length=376, Percent_Identity=25.2659574468085, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI29029595, Length=384, Percent_Identity=25.5208333333333, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI164419736, Length=379, Percent_Identity=24.5382585751979, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI28416444, Length=373, Percent_Identity=22.7882037533512, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI4504117, Length=373, Percent_Identity=22.7882037533512, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI28605145, Length=377, Percent_Identity=23.6074270557029, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI28559003, Length=377, Percent_Identity=22.5464190981432, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI261278362, Length=377, Percent_Identity=22.5464190981432, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI11386137, Length=377, Percent_Identity=22.5464190981432, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI223278356, Length=340, Percent_Identity=24.1176470588235, Blast_Score=85, Evalue=9e-17, Organism=Homo sapiens, GI153946391, Length=371, Percent_Identity=23.1805929919137, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI29029597, Length=403, Percent_Identity=24.8138957816377, Blast_Score=82, Evalue=8e-16, Organism=Homo sapiens, GI62988346, Length=336, Percent_Identity=23.8095238095238, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI310113271, Length=336, Percent_Identity=23.2142857142857, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI167003331, Length=341, Percent_Identity=21.9941348973607, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI1787031, Length=129, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71988861, Length=384, Percent_Identity=22.65625, Blast_Score=88, Evalue=8e-18, Organism=Caenorhabditis elegans, GI25144707, Length=339, Percent_Identity=23.598820058997, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71989779, Length=371, Percent_Identity=22.6415094339623, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193208538, Length=339, Percent_Identity=20.0589970501475, Blast_Score=72, Evalue=5e-13, Organism=Caenorhabditis elegans, GI193209667, Length=262, Percent_Identity=24.8091603053435, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI62484334, Length=376, Percent_Identity=23.4042553191489, Blast_Score=89, Evalue=7e-18, Organism=Drosophila melanogaster, GI24648559, Length=376, Percent_Identity=24.468085106383, Blast_Score=88, Evalue=9e-18, Organism=Drosophila melanogaster, GI24648478, Length=350, Percent_Identity=24.8571428571429, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI116008052, Length=347, Percent_Identity=23.342939481268, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI45549153, Length=385, Percent_Identity=23.1168831168831, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI21355999, Length=349, Percent_Identity=21.4899713467049, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI116008056, Length=381, Percent_Identity=21.5223097112861, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24644257, Length=346, Percent_Identity=21.3872832369942, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24640783, Length=382, Percent_Identity=21.9895287958115, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: 1440 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 460 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 39710; Mature: 39579
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRSIWFCLVTVLMTLPALPLRAQELVVNTVTRPPFSMPVGEHETGFTMDLIREVSQRL CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHC GWDIQINRVDNFAQMLEEVERGEADMAAANISITAGREAVMDFSQPIFESGLQIMLHQDD CCCEEEEHHHHHHHHHHHHHCCCHHHHHEEEEEECCHHHHHHHHHHHHHCCCEEEEECCC VSEPSLISALMSWDLFAAIAIAFVLLLVGGMLMWVFERRAQPYFDRPLKDAWFPSFWWAL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHH NLVVNGGFEERVPRSALGRVFGVLLVLSSLFVVSVFVAKITAAMTVEAINGSVNSVNDLY HHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH GKRVGTIQGSTAAGFLDRREIDYVAFPGLDKMLEDFEDGDTRIVVFDAPVLNHYVKTDGA HCCCCCCCCCHHHCCHHHHCCCEEECCCHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCC GIGHVMGRKFLTEYYGIIFPQGSDMVEPFNRALLKMQEDGAYETLYRKWFGQSF CHHHHHHHHHHHHHHCEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC >Mature Secondary Structure TLRSIWFCLVTVLMTLPALPLRAQELVVNTVTRPPFSMPVGEHETGFTMDLIREVSQRL CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHC GWDIQINRVDNFAQMLEEVERGEADMAAANISITAGREAVMDFSQPIFESGLQIMLHQDD CCCEEEEHHHHHHHHHHHHHCCCHHHHHEEEEEECCHHHHHHHHHHHHHCCCEEEEECCC VSEPSLISALMSWDLFAAIAIAFVLLLVGGMLMWVFERRAQPYFDRPLKDAWFPSFWWAL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHH NLVVNGGFEERVPRSALGRVFGVLLVLSSLFVVSVFVAKITAAMTVEAINGSVNSVNDLY HHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH GKRVGTIQGSTAAGFLDRREIDYVAFPGLDKMLEDFEDGDTRIVVFDAPVLNHYVKTDGA HCCCCCCCCCHHHCCHHHHCCCEEECCCHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCC GIGHVMGRKFLTEYYGIIFPQGSDMVEPFNRALLKMQEDGAYETLYRKWFGQSF CHHHHHHHHHHHHHHCEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: Translocates substrate across the membrane [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]