Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082837

Identifier: 99082837

GI number: 99082837

Start: 3164896

End: 3165993

Strand: Direct

Name: 99082837

Synonym: TM1040_2997

Alternate gene names: NA

Gene position: 3164896-3165993 (Clockwise)

Preceding gene: 99082833

Following gene: 99082838

Centisome position: 98.87

GC content: 62.3

Gene sequence:

>1098_bases
ATGAGCTGGCTCGGTCTATGGCATAAAGAGGCGCAGTATTTCGACGCCGCTGGACTCACCCCGTCGGTAGAACGCAGCTG
TCTCTTGTTGCGCGAAGCCGATGCACTGTTGCCGCGGGGCGCGCTGGTTCTGGAGGTGAGCCTGCCGGAATTGCGCAAAC
CCGAACCCCTGGTGCTGTTTGAGCGTGGAGGCGACTGGCCTTTGCGATTTCAGCTCTCGGCGGTGCCGGGGGGCGGTATC
AATCTGGTGCTGGAGCAATATGGCGCGGTGTTTCACCAAACGCTGAACCCGACCAAGCGGGGGCGTGCGGATCAGGTGCG
GCTGACCTACAACTGGGACGCTCCGGCGTTTGAAGGCCAGCTTGCGCTCGAATGGCTTGATGGAGATCGGGCCGAAATCG
CGGATATTCATGCCCCACGCCCCTGGCGGCTTGCGGATCTTGAGGCTTTGATTGAAGGGGGGCCGCACTGCTTTATCGCC
TCCGGCGTCGAATACATTGCACTTTCTGATCAGCCGGAGCCGGTGGGGCCGATGCCCGGCCTCTCGCCGTTTACACCGGT
GGAAACGGAAACGGGGGCGCGACCGATCAAGGACCTGCGTCGAGGTGACTTGCTGCGCTGCGCAAGTGGTGATTTGGTCC
CCGTCTTGCATAAAATCGAACGTGAAGTGCCAGCGGTGGGCAGCTTTTGTCCCGTGCAGCTTCGGGCGCCATATTTCGGC
CTGACACAGGATATTACCGTCGCGCCTTTCCAACGCATGGTGCTCACCGGGTCTGAGGTTGAATATCTCTTTGGATGTGA
GGCTGTGCTTGCGCCGGCAGAAATGCTTGCGGCCACGCGCACCGCCCGTCGGGTCTTGCCCGCGGGGCCGATCACGACCT
ATGCGCAGGTGATCCTGCCCGGCCATGAGGTGCCAGTTGTGGCGGGGCTCGGGGTCGAGAGCCTTTTTCTGGGGCGCATT
CGGCGCGACCGTTCCGCACTTGGGGCCAGCCTCTTTGCAGGGCTAGATCGCAACTCTCTGCCAGAACACGCACAGCCGCG
CTACCCCGTGGTGCGCGCGTTTGATGCCGCAATCCTTGCAGAACATCGCACCGCCTGA

Upstream 100 bases:

>100_bases
CGATGAACGCGCCGCCCGGGGCAAAACACTTACGGGCGGTGGAGTACGACATGGCAGGCAACACAGGGCTCCGGACGGTT
GCGACCGGGCAGGCGCGCAG

Downstream 100 bases:

>100_bases
GCACTGAGGACTTGAAAAAATCCCCGTAGCCCTTCTAAGCAGTCTCACCGTTTCTAGTGAGAACCGCTCCATGACCCTGC
GCTCTATTTGGTTTTGTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 365; Mature: 364

Protein sequence:

>365_residues
MSWLGLWHKEAQYFDAAGLTPSVERSCLLLREADALLPRGALVLEVSLPELRKPEPLVLFERGGDWPLRFQLSAVPGGGI
NLVLEQYGAVFHQTLNPTKRGRADQVRLTYNWDAPAFEGQLALEWLDGDRAEIADIHAPRPWRLADLEALIEGGPHCFIA
SGVEYIALSDQPEPVGPMPGLSPFTPVETETGARPIKDLRRGDLLRCASGDLVPVLHKIEREVPAVGSFCPVQLRAPYFG
LTQDITVAPFQRMVLTGSEVEYLFGCEAVLAPAEMLAATRTARRVLPAGPITTYAQVILPGHEVPVVAGLGVESLFLGRI
RRDRSALGASLFAGLDRNSLPEHAQPRYPVVRAFDAAILAEHRTA

Sequences:

>Translated_365_residues
MSWLGLWHKEAQYFDAAGLTPSVERSCLLLREADALLPRGALVLEVSLPELRKPEPLVLFERGGDWPLRFQLSAVPGGGI
NLVLEQYGAVFHQTLNPTKRGRADQVRLTYNWDAPAFEGQLALEWLDGDRAEIADIHAPRPWRLADLEALIEGGPHCFIA
SGVEYIALSDQPEPVGPMPGLSPFTPVETETGARPIKDLRRGDLLRCASGDLVPVLHKIEREVPAVGSFCPVQLRAPYFG
LTQDITVAPFQRMVLTGSEVEYLFGCEAVLAPAEMLAATRTARRVLPAGPITTYAQVILPGHEVPVVAGLGVESLFLGRI
RRDRSALGASLFAGLDRNSLPEHAQPRYPVVRAFDAAILAEHRTA
>Mature_364_residues
SWLGLWHKEAQYFDAAGLTPSVERSCLLLREADALLPRGALVLEVSLPELRKPEPLVLFERGGDWPLRFQLSAVPGGGIN
LVLEQYGAVFHQTLNPTKRGRADQVRLTYNWDAPAFEGQLALEWLDGDRAEIADIHAPRPWRLADLEALIEGGPHCFIAS
GVEYIALSDQPEPVGPMPGLSPFTPVETETGARPIKDLRRGDLLRCASGDLVPVLHKIEREVPAVGSFCPVQLRAPYFGL
TQDITVAPFQRMVLTGSEVEYLFGCEAVLAPAEMLAATRTARRVLPAGPITTYAQVILPGHEVPVVAGLGVESLFLGRIR
RDRSALGASLFAGLDRNSLPEHAQPRYPVVRAFDAAILAEHRTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39878; Mature: 39747

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWLGLWHKEAQYFDAAGLTPSVERSCLLLREADALLPRGALVLEVSLPELRKPEPLVLF
CCCCHHHHHHHHHHHCCCCCCCHHHHEEEEHHHHHHCCCCEEEEEEECCCCCCCCCEEEE
ERGGDWPLRFQLSAVPGGGINLVLEQYGAVFHQTLNPTKRGRADQVRLTYNWDAPAFEGQ
ECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHCCCCCEEEEEEECCCCCCCCE
LALEWLDGDRAEIADIHAPRPWRLADLEALIEGGPHCFIASGVEYIALSDQPEPVGPMPG
EEEEEECCCCCEEEECCCCCCCCHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCCCCCC
LSPFTPVETETGARPIKDLRRGDLLRCASGDLVPVLHKIEREVPAVGSFCPVQLRAPYFG
CCCCCCCCCCCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCC
LTQDITVAPFQRMVLTGSEVEYLFGCEAVLAPAEMLAATRTARRVLPAGPITTYAQVILP
CCCCCCCCCHHHHEECCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEEC
GHEVPVVAGLGVESLFLGRIRRDRSALGASLFAGLDRNSLPEHAQPRYPVVRAFDAAILA
CCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
EHRTA
HCCCC
>Mature Secondary Structure 
SWLGLWHKEAQYFDAAGLTPSVERSCLLLREADALLPRGALVLEVSLPELRKPEPLVLF
CCCHHHHHHHHHHHCCCCCCCHHHHEEEEHHHHHHCCCCEEEEEEECCCCCCCCCEEEE
ERGGDWPLRFQLSAVPGGGINLVLEQYGAVFHQTLNPTKRGRADQVRLTYNWDAPAFEGQ
ECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHCCCCCEEEEEEECCCCCCCCE
LALEWLDGDRAEIADIHAPRPWRLADLEALIEGGPHCFIASGVEYIALSDQPEPVGPMPG
EEEEEECCCCCEEEECCCCCCCCHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCCCCCC
LSPFTPVETETGARPIKDLRRGDLLRCASGDLVPVLHKIEREVPAVGSFCPVQLRAPYFG
CCCCCCCCCCCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCC
LTQDITVAPFQRMVLTGSEVEYLFGCEAVLAPAEMLAATRTARRVLPAGPITTYAQVILP
CCCCCCCCCHHHHEECCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEEC
GHEVPVVAGLGVESLFLGRIRRDRSALGASLFAGLDRNSLPEHAQPRYPVVRAFDAAILA
CCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
EHRTA
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA