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The map label for this gene is lcrS [H]

Identifier: 99082809

GI number: 99082809

Start: 3134929

End: 3135195

Strand: Direct

Name: lcrS [H]

Synonym: TM1040_2969

Alternate gene names: 99082809

Gene position: 3134929-3135195 (Clockwise)

Preceding gene: 99082808

Following gene: 99082810

Centisome position: 97.94

GC content: 56.18

Gene sequence:

>267_bases
ATGAAGGCATCGAAGTTCACGGACGCGCAGAAGGCGTTCATCATCAAGCAGGCGGAGGACGGCACCTCGGTGGCCGAGGT
CTGCCGCAAGGCCGGGATCAGCACGGCGACATTTTTCAACTGGAAGAAAAAATATGCTGGCCTGATGCCATCCGAGATGA
AACGGCTCAGGGAACTCGAGCAGGAGAACGCGCGTCTGAAGAAGATCGTCGCGGATCTCGCGCTCGACAAGGAAATGCTG
CAGGACGTCATTAAGCGAAAGCTTTGA

Upstream 100 bases:

>100_bases
TCAGTAAAGGACCAAACCCTGATGTGATCCCCGAAAACGCCCCCGTTTTTGATTAGAGTTTTCCGCAGAGAAACCCTGGC
TGGGAGAGGAGCGGAAACGC

Downstream 100 bases:

>100_bases
GGCCTGCCCGGAAAAGGTCGCTGGTCGACGGGATGCGGGCGGATTGGCAGGTGTCGATCCGCCGGGCCTGCGAGGTGATC
CGGTTCGATCCGAGAACCTA

Product: transposase IS3/IS911

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MKASKFTDAQKAFIIKQAEDGTSVAEVCRKAGISTATFFNWKKKYAGLMPSEMKRLRELEQENARLKKIVADLALDKEML
QDVIKRKL

Sequences:

>Translated_88_residues
MKASKFTDAQKAFIIKQAEDGTSVAEVCRKAGISTATFFNWKKKYAGLMPSEMKRLRELEQENARLKKIVADLALDKEML
QDVIKRKL
>Mature_88_residues
MKASKFTDAQKAFIIKQAEDGTSVAEVCRKAGISTATFFNWKKKYAGLMPSEMKRLRELEQENARLKKIVADLALDKEML
QDVIKRKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002514 [H]

Pfam domain/function: PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 10050; Mature: 10050

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKASKFTDAQKAFIIKQAEDGTSVAEVCRKAGISTATFFNWKKKYAGLMPSEMKRLRELE
CCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
QENARLKKIVADLALDKEMLQDVIKRKL
HHHHHHHHHHHHHHHCHHHHHHHHHHCC
>Mature Secondary Structure
MKASKFTDAQKAFIIKQAEDGTSVAEVCRKAGISTATFFNWKKKYAGLMPSEMKRLRELE
CCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
QENARLKKIVADLALDKEMLQDVIKRKL
HHHHHHHHHHHHHHHCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9746557; 9748454; 11586360 [H]