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The map label for this gene is parB [H]

Identifier: 99082708

GI number: 99082708

Start: 3037330

End: 3038229

Strand: Direct

Name: parB [H]

Synonym: TM1040_2868

Alternate gene names: 99082708

Gene position: 3037330-3038229 (Clockwise)

Preceding gene: 99082707

Following gene: 99082713

Centisome position: 94.89

GC content: 53.56

Gene sequence:

>900_bases
ATGGCAGATAAAAAGACTAAACCGCGTGGCTTGGGTCGTGGCTTGTCGGCGTTGATGGCAGACGTAAATGCGGATCCGGT
GAGCACTGAAGGAGGACGACAGCCCCGAAATGCTGAAATCCTCGTTCCTATCGAAAAAGTGCAGGCGAATCCGGATCAGC
CGCGTCGCCAATTCCTCCAAGAGGACCTGGATGATCTTACCGCATCCATCAAGGAGAAGGGTGTTCTCCAGCCGCTCATT
GTTCGCCCGCGTGATGGTGGCATCTATGAAATCGTAGCTGGTGAGCGCCGCTGGAGAGCGGCGCAAGCTGCTCAACTCCA
TGAGGTGCCTGTGCTCATCCGAGATTACTCGGATGTTGAGATGCTCGAAGTTGCCATTATCGAGAACATTCAGCGGTCTG
ACCTAAATGCACTTGAAGAGGCCCAGAGCTATAAGCAACTGATGGACAAGTTCGGCCATACGCAGGAAAAGATGGCGGAG
GCGCTCGGGAAGAGCCGCAGCCACATTGCGAACTTGGTTCGCCTACTGCATTTGCCTGAGGATGTTCAGTCACTTGTTCT
GGATCGCAAGTTGTCTGCCGGCCACGCCAGAGCGTTGATTACTTCTGACAATGCCTCGGAGCTCGCAAAGAAAATCGTAA
AGGGCGGTCTGTCTGTGCGGGCCACGGAGTCGCTTGTAAAGAAAGATGCGGCAGGGACTACATCTTCGTCTAATTCACGC
AAAGCAAAACCGCAGGCAGACAAGGACGCGGATACGCGAGCGCTGGAGAATGACTTGTCAGCGATGATCCGTATGAAGGT
ATCGATTGACCACAAACCCGGTGGCGAATCTGGGGTTGTGACGATTTCCTACGAGACTTTGGATCAGTTGGATGATCTGT
GTAATCTGCTCAGCCGTTAG

Upstream 100 bases:

>100_bases
TCCAAGCTCTCTTGGAGCAAAAGCTTATCGTCAATTAGCTGGTGAGATTATTGCCAACCACCAAGACATCGCGGCACAAT
AAGAAAAAGAGGGGCGAACA

Downstream 100 bases:

>100_bases
GGCGTGACCAAATGAAGATCATGACCCCTCCAAGCGTAAGGCCCTGAATAAGCAGGACATGTGTCGGGACATTCAGGATG
ATCGAAATAGAAAAAACAGC

Product: chromosome segregation DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MADKKTKPRGLGRGLSALMADVNADPVSTEGGRQPRNAEILVPIEKVQANPDQPRRQFLQEDLDDLTASIKEKGVLQPLI
VRPRDGGIYEIVAGERRWRAAQAAQLHEVPVLIRDYSDVEMLEVAIIENIQRSDLNALEEAQSYKQLMDKFGHTQEKMAE
ALGKSRSHIANLVRLLHLPEDVQSLVLDRKLSAGHARALITSDNASELAKKIVKGGLSVRATESLVKKDAAGTTSSSNSR
KAKPQADKDADTRALENDLSAMIRMKVSIDHKPGGESGVVTISYETLDQLDDLCNLLSR

Sequences:

>Translated_299_residues
MADKKTKPRGLGRGLSALMADVNADPVSTEGGRQPRNAEILVPIEKVQANPDQPRRQFLQEDLDDLTASIKEKGVLQPLI
VRPRDGGIYEIVAGERRWRAAQAAQLHEVPVLIRDYSDVEMLEVAIIENIQRSDLNALEEAQSYKQLMDKFGHTQEKMAE
ALGKSRSHIANLVRLLHLPEDVQSLVLDRKLSAGHARALITSDNASELAKKIVKGGLSVRATESLVKKDAAGTTSSSNSR
KAKPQADKDADTRALENDLSAMIRMKVSIDHKPGGESGVVTISYETLDQLDDLCNLLSR
>Mature_298_residues
ADKKTKPRGLGRGLSALMADVNADPVSTEGGRQPRNAEILVPIEKVQANPDQPRRQFLQEDLDDLTASIKEKGVLQPLIV
RPRDGGIYEIVAGERRWRAAQAAQLHEVPVLIRDYSDVEMLEVAIIENIQRSDLNALEEAQSYKQLMDKFGHTQEKMAEA
LGKSRSHIANLVRLLHLPEDVQSLVLDRKLSAGHARALITSDNASELAKKIVKGGLSVRATESLVKKDAAGTTSSSNSRK
AKPQADKDADTRALENDLSAMIRMKVSIDHKPGGESGVVTISYETLDQLDDLCNLLSR

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 32812; Mature: 32681

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADKKTKPRGLGRGLSALMADVNADPVSTEGGRQPRNAEILVPIEKVQANPDQPRRQFLQ
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCHHHHHHHH
EDLDDLTASIKEKGVLQPLIVRPRDGGIYEIVAGERRWRAAQAAQLHEVPVLIRDYSDVE
HHHHHHHHHHHHCCCCCCEEEECCCCCEEEEECCCHHHHHHHHHHHHHCCEEEECCCCHH
MLEVAIIENIQRSDLNALEEAQSYKQLMDKFGHTQEKMAEALGKSRSHIANLVRLLHLPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCH
DVQSLVLDRKLSAGHARALITSDNASELAKKIVKGGLSVRATESLVKKDAAGTTSSSNSR
HHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCC
KAKPQADKDADTRALENDLSAMIRMKVSIDHKPGGESGVVTISYETLDQLDDLCNLLSR
CCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ADKKTKPRGLGRGLSALMADVNADPVSTEGGRQPRNAEILVPIEKVQANPDQPRRQFLQ
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCHHHHHHHH
EDLDDLTASIKEKGVLQPLIVRPRDGGIYEIVAGERRWRAAQAAQLHEVPVLIRDYSDVE
HHHHHHHHHHHHCCCCCCEEEECCCCCEEEEECCCHHHHHHHHHHHHHCCEEEECCCCHH
MLEVAIIENIQRSDLNALEEAQSYKQLMDKFGHTQEKMAEALGKSRSHIANLVRLLHLPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCH
DVQSLVLDRKLSAGHARALITSDNASELAKKIVKGGLSVRATESLVKKDAAGTTSSSNSR
HHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCC
KAKPQADKDADTRALENDLSAMIRMKVSIDHKPGGESGVVTISYETLDQLDDLCNLLSR
CCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9054507 [H]