Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is parA [H]

Identifier: 99082707

GI number: 99082707

Start: 3036499

End: 3037311

Strand: Direct

Name: parA [H]

Synonym: TM1040_2867

Alternate gene names: 99082707

Gene position: 3036499-3037311 (Clockwise)

Preceding gene: 99082706

Following gene: 99082708

Centisome position: 94.86

GC content: 50.92

Gene sequence:

>813_bases
GTGTCTGACTTTTCCCGTTTTGGAGTCCCCCGGATCATTGCGATCGCTAACCAAAAGGGGGGCGTGGGAAAAACGACTAC
TGCGATTAACCTCGCCGCCGCTTTGGTAGAGGAGGGGATGCGTGTTTTGCTGGTTGATCTCGATCCCCAAGGGAACGCGT
CGACAGGACTGGGCGTCGAAGTTGATGACAGAGAGCACACGACTTATGATCTGCTGGTTGAGGAAGCAGAACTCTCACAG
GTGATCCGCGAGACAGATCTAGAGGATCTTTGCATTGTCCCGGCAAACGTAGATCTAAGCTCTGCTGACATCGAGTTATT
TTCTAACGAAAAACGGAGCTTTCTTCTCCACGACGCCCTGCGTCAACCAGCTATGACGGAATATGATTGGGACTATATCC
TGATTGATTGCCCGCCGTCGCTCAATCTCCTGACTGTGAACGCAATGGTTGCCGCACATTCAGTGCTGATTCCGCTACAG
AGTGAGTTCTTTGCTCTCGAAGGTTTGTCCCAACTCATGCTCACGATCCGTGAGGTCCGACAAGCTGCTAATCCTCAGTT
GCGCATCGAAGGTGTCGTTTTGACGATGTATGATCGTCGAAATAACCTGTCCCAGCAGGTTGAACAGGATGCACGGGATA
ATCTCGGGGATCTCGTGTTTCGGACAAAGATCCCAAGAAATGTGCGGGTAAGCGAGTCACCATCCTACGCGATGCCGGTA
CTGAATTACGATCCAAGCTCTCTTGGAGCAAAAGCTTATCGTCAATTAGCTGGTGAGATTATTGCCAACCACCAAGACAT
CGCGGCACAATAA

Upstream 100 bases:

>100_bases
GAGGTGGATAACGCGCGCAAGAGATGGCGGTTTGAGTGCGATGAGATTACAAGTGTAACTGAGCCTGGTGCTGTCATCCT
CAAGATAAAGGGAGTAGAGC

Downstream 100 bases:

>100_bases
GAAAAAGAGGGGCGAACAATGGCAGATAAAAAGACTAAACCGCGTGGCTTGGGTCGTGGCTTGTCGGCGTTGATGGCAGA
CGTAAATGCGGATCCGGTGA

Product: chromosome segregation ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MSDFSRFGVPRIIAIANQKGGVGKTTTAINLAAALVEEGMRVLLVDLDPQGNASTGLGVEVDDREHTTYDLLVEEAELSQ
VIRETDLEDLCIVPANVDLSSADIELFSNEKRSFLLHDALRQPAMTEYDWDYILIDCPPSLNLLTVNAMVAAHSVLIPLQ
SEFFALEGLSQLMLTIREVRQAANPQLRIEGVVLTMYDRRNNLSQQVEQDARDNLGDLVFRTKIPRNVRVSESPSYAMPV
LNYDPSSLGAKAYRQLAGEIIANHQDIAAQ

Sequences:

>Translated_270_residues
MSDFSRFGVPRIIAIANQKGGVGKTTTAINLAAALVEEGMRVLLVDLDPQGNASTGLGVEVDDREHTTYDLLVEEAELSQ
VIRETDLEDLCIVPANVDLSSADIELFSNEKRSFLLHDALRQPAMTEYDWDYILIDCPPSLNLLTVNAMVAAHSVLIPLQ
SEFFALEGLSQLMLTIREVRQAANPQLRIEGVVLTMYDRRNNLSQQVEQDARDNLGDLVFRTKIPRNVRVSESPSYAMPV
LNYDPSSLGAKAYRQLAGEIIANHQDIAAQ
>Mature_269_residues
SDFSRFGVPRIIAIANQKGGVGKTTTAINLAAALVEEGMRVLLVDLDPQGNASTGLGVEVDDREHTTYDLLVEEAELSQV
IRETDLEDLCIVPANVDLSSADIELFSNEKRSFLLHDALRQPAMTEYDWDYILIDCPPSLNLLTVNAMVAAHSVLIPLQS
EFFALEGLSQLMLTIREVRQAANPQLRIEGVVLTMYDRRNNLSQQVEQDARDNLGDLVFRTKIPRNVRVSESPSYAMPVL
NYDPSSLGAKAYRQLAGEIIANHQDIAAQ

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 29867; Mature: 29736

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: PS00435 PEROXIDASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDFSRFGVPRIIAIANQKGGVGKTTTAINLAAALVEEGMRVLLVDLDPQGNASTGLGVE
CCCCHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEE
VDDREHTTYDLLVEEAELSQVIRETDLEDLCIVPANVDLSSADIELFSNEKRSFLLHDAL
ECCCCCCCHHHEECHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCCHHHHHHHHH
RQPAMTEYDWDYILIDCPPSLNLLTVNAMVAAHSVLIPLQSEFFALEGLSQLMLTIREVR
CCCCCCCCCCCEEEEECCCCCCEEEEHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHH
QAANPQLRIEGVVLTMYDRRNNLSQQVEQDARDNLGDLVFRTKIPRNVRVSESPSYAMPV
HHCCCCEEEEEEEEEEECCCCCHHHHHHHHHHCCHHHEEEEECCCCCEEECCCCCCCCCE
LNYDPSSLGAKAYRQLAGEIIANHQDIAAQ
ECCCCHHHHHHHHHHHHHHHHCCCHHHCCC
>Mature Secondary Structure 
SDFSRFGVPRIIAIANQKGGVGKTTTAINLAAALVEEGMRVLLVDLDPQGNASTGLGVE
CCCHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEE
VDDREHTTYDLLVEEAELSQVIRETDLEDLCIVPANVDLSSADIELFSNEKRSFLLHDAL
ECCCCCCCHHHEECHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCCHHHHHHHHH
RQPAMTEYDWDYILIDCPPSLNLLTVNAMVAAHSVLIPLQSEFFALEGLSQLMLTIREVR
CCCCCCCCCCCEEEEECCCCCCEEEEHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHH
QAANPQLRIEGVVLTMYDRRNNLSQQVEQDARDNLGDLVFRTKIPRNVRVSESPSYAMPV
HHCCCCEEEEEEEEEEECCCCCHHHHHHHHHHCCHHHEEEEECCCCCEEECCCCCCCCCE
LNYDPSSLGAKAYRQLAGEIIANHQDIAAQ
ECCCCHHHHHHHHHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9054507 [H]