| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is divL [H]
Identifier: 99082681
GI number: 99082681
Start: 3008991
End: 3010541
Strand: Direct
Name: divL [H]
Synonym: TM1040_2841
Alternate gene names: 99082681
Gene position: 3008991-3010541 (Clockwise)
Preceding gene: 99082680
Following gene: 99082682
Centisome position: 94.0
GC content: 59.96
Gene sequence:
>1551_bases ATGCAAGAATTGATGTCCGTCGAGTGGTTCATTCTGGTGACCCTCTGCATCGCCAGCGCAGCGGTTGCGGTCTGGTTTCT GAACCCCAAGGCCGAGGCCAAGGGGATGGAGCACGAATTGCTGATCGCCGATGGCCGCACGGATGCGGTTTTCCTATTTG ACGACCAGACGCTGATTGCCTGGTCATCGGGCGCGCGCAAGTTCCTCGATGACAATGCCGAAGATTTCAGTTGGGGCAAG CTGCGGGACAAGCTGTCGCGCTCCTACCCGGGCCTACCGCAGTCACCCGGTTTCCTGCGCGATGTCGGCTCCCTGACACT ATCTGGCACTGCAGAGGCAGACAACCGCGAGGCCCATTGCGAATGGATCGACGGCGTTACCCGTATTCAGCTGCGCCGCG CCGCCTCGGACATCGGCCACGTCGGCGATGATCAGGAACTGACCACCCTGCGTGCAGCCGTGCATCAGGCCCCCTACCCC GTTTGGCTGCAATCCGATGATGCCCGCGTCACCTGGACCAACCTTGCCTACGATCGTCTGAACCAGAAAATCCGTGGCCG CGGCAATGATACCTCTGCACCTCTGTTTCCAAACCTCGACGCGCCGATGAACAGCGGTCGCGCGGAACGGATCTCCATCG AGCTGCCGGAAACCGACAAGAAGCTCTGGTATAATGTCTCCACCACCGAGACCGAAGCCGGTTGGCTCTGTCATGCCATG GACGTCAACGCCGTGGTGGATGCTGAGATCGCGCAACGCAACTTTGTGCAGACGCTGGCAAAAACCTTTGCGCAGCTTTC CATCGGCCTTGCGATCTTTGACCGCAACCGCCAACTGGTCCTGTTCAACCCCGTCTTGATCGACCTCACCGCCCTGCCGG CGAGTTTTCTGAGCTCGCGCCCCAACATGATGTCCTTCTTTGACCGCCTGCGCGACCAACGCATGATGCCGGAACCAAAG AACTACTCGAGCTGGCGTCACCAGATGGCGGATCTCCTGGAGGCTGCCGCCGAGGGCCGCTATCAGGAAACATGGTCTTT GCCCTCCGGGTCGGTCTATTCGGTCTCTGGCCGTCCACATCCTGATGGGGCCATCGCCTTTCTGTTTGAAGACATCACCG CCGAAATCACTCTGACCCGTCAGTTCCGCTCTGAACTGGAGTTAGGCCAGTCGATCCTCGATCATATCGACGACGCCTTT GCGGTCTTCGGCGCCGACGGTAGCATGGTCTATTCCAACACCGCCTACCACACGATGTGGAAAACCGACCCCGACGCAAG CTTTGCCAAAATCACCATCACCGATGCCTGCCGCACCTGGCAGGAGCTCTCGGGACCAACCCCAACCTGGGGTGAAGTGC GCGACTTTGTAGCCGGTGGCACCAGTGATCGTTCTGATTGGTGGTCTCGCGTGGACATGCGCAACGGTGAGCAGTTGCTC TGCCGCGTGCAGTCGCTCCAGAACGGCTCCGTTATGGTCCGTTTCCAGCAGATCGACCTGCCGCTGGCGCCGCCAGAACA AGAGCGTTTCGCCGTCCTCAAGGATAGCTGA
Upstream 100 bases:
>100_bases CCGATACAGTTTTAACTATTCACTTTTGGGAAACCAGTTAAACTTCACTTAACCATTGTCATGGAAACTCAACGCAAGGA GAAATAGCGAGGCTGTGTCC
Downstream 100 bases:
>100_bases ACCCGCTTGCGGAGCCTCGCGCTGAACGTCATTGTGGCGCCATGACACAACGCTCTGCGACTTTCAGGCTGCCCAGCAGC GACGCAACCACAGAATTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 516; Mature: 516
Protein sequence:
>516_residues MQELMSVEWFILVTLCIASAAVAVWFLNPKAEAKGMEHELLIADGRTDAVFLFDDQTLIAWSSGARKFLDDNAEDFSWGK LRDKLSRSYPGLPQSPGFLRDVGSLTLSGTAEADNREAHCEWIDGVTRIQLRRAASDIGHVGDDQELTTLRAAVHQAPYP VWLQSDDARVTWTNLAYDRLNQKIRGRGNDTSAPLFPNLDAPMNSGRAERISIELPETDKKLWYNVSTTETEAGWLCHAM DVNAVVDAEIAQRNFVQTLAKTFAQLSIGLAIFDRNRQLVLFNPVLIDLTALPASFLSSRPNMMSFFDRLRDQRMMPEPK NYSSWRHQMADLLEAAAEGRYQETWSLPSGSVYSVSGRPHPDGAIAFLFEDITAEITLTRQFRSELELGQSILDHIDDAF AVFGADGSMVYSNTAYHTMWKTDPDASFAKITITDACRTWQELSGPTPTWGEVRDFVAGGTSDRSDWWSRVDMRNGEQLL CRVQSLQNGSVMVRFQQIDLPLAPPEQERFAVLKDS
Sequences:
>Translated_516_residues MQELMSVEWFILVTLCIASAAVAVWFLNPKAEAKGMEHELLIADGRTDAVFLFDDQTLIAWSSGARKFLDDNAEDFSWGK LRDKLSRSYPGLPQSPGFLRDVGSLTLSGTAEADNREAHCEWIDGVTRIQLRRAASDIGHVGDDQELTTLRAAVHQAPYP VWLQSDDARVTWTNLAYDRLNQKIRGRGNDTSAPLFPNLDAPMNSGRAERISIELPETDKKLWYNVSTTETEAGWLCHAM DVNAVVDAEIAQRNFVQTLAKTFAQLSIGLAIFDRNRQLVLFNPVLIDLTALPASFLSSRPNMMSFFDRLRDQRMMPEPK NYSSWRHQMADLLEAAAEGRYQETWSLPSGSVYSVSGRPHPDGAIAFLFEDITAEITLTRQFRSELELGQSILDHIDDAF AVFGADGSMVYSNTAYHTMWKTDPDASFAKITITDACRTWQELSGPTPTWGEVRDFVAGGTSDRSDWWSRVDMRNGEQLL CRVQSLQNGSVMVRFQQIDLPLAPPEQERFAVLKDS >Mature_516_residues MQELMSVEWFILVTLCIASAAVAVWFLNPKAEAKGMEHELLIADGRTDAVFLFDDQTLIAWSSGARKFLDDNAEDFSWGK LRDKLSRSYPGLPQSPGFLRDVGSLTLSGTAEADNREAHCEWIDGVTRIQLRRAASDIGHVGDDQELTTLRAAVHQAPYP VWLQSDDARVTWTNLAYDRLNQKIRGRGNDTSAPLFPNLDAPMNSGRAERISIELPETDKKLWYNVSTTETEAGWLCHAM DVNAVVDAEIAQRNFVQTLAKTFAQLSIGLAIFDRNRQLVLFNPVLIDLTALPASFLSSRPNMMSFFDRLRDQRMMPEPK NYSSWRHQMADLLEAAAEGRYQETWSLPSGSVYSVSGRPHPDGAIAFLFEDITAEITLTRQFRSELELGQSILDHIDDAF AVFGADGSMVYSNTAYHTMWKTDPDASFAKITITDACRTWQELSGPTPTWGEVRDFVAGGTSDRSDWWSRVDMRNGEQLL CRVQSLQNGSVMVRFQQIDLPLAPPEQERFAVLKDS
Specific function: Required for cell division and growth. It catalyzes the phosphorylation of CtrA and activates transcription in vitro of the cell cycle-regulated fliF promoter [H]
COG id: COG2202
COG function: function code T; FOG: PAS/PAC domain
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 57945; Mature: 57945
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS00027 HOMEOBOX_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQELMSVEWFILVTLCIASAAVAVWFLNPKAEAKGMEHELLIADGRTDAVFLFDDQTLIA CCHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHCCCCEEEEEECCCCCEEEEEECCEEEE WSSGARKFLDDNAEDFSWGKLRDKLSRSYPGLPQSPGFLRDVGSLTLSGTAEADNREAHC ECCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCEEEECCCCCCCCCCCH EWIDGVTRIQLRRAASDIGHVGDDQELTTLRAAVHQAPYPVWLQSDDARVTWTNLAYDRL HHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEECCCCEEEEEHHHHHHH NQKIRGRGNDTSAPLFPNLDAPMNSGRAERISIELPETDKKLWYNVSTTETEAGWLCHAM HHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCEEEEEE DVNAVVDAEIAQRNFVQTLAKTFAQLSIGLAIFDRNRQLVLFNPVLIDLTALPASFLSSR CCCCEECHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEECCCEEEHHHCCHHHHCCC PNMMSFFDRLRDQRMMPEPKNYSSWRHQMADLLEAAAEGRYQETWSLPSGSVYSVSGRPH CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCC PDGAIAFLFEDITAEITLTRQFRSELELGQSILDHIDDAFAVFGADGSMVYSNTAYHTMW CCCEEEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCEEEEEE KTDPDASFAKITITDACRTWQELSGPTPTWGEVRDFVAGGTSDRSDWWSRVDMRNGEQLL CCCCCCCEEEEEEHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHH CRVQSLQNGSVMVRFQQIDLPLAPPEQERFAVLKDS HHHHHCCCCCEEEEEEECCCCCCCCCCCCEEEEECC >Mature Secondary Structure MQELMSVEWFILVTLCIASAAVAVWFLNPKAEAKGMEHELLIADGRTDAVFLFDDQTLIA CCHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHCCCCEEEEEECCCCCEEEEEECCEEEE WSSGARKFLDDNAEDFSWGKLRDKLSRSYPGLPQSPGFLRDVGSLTLSGTAEADNREAHC ECCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCEEEECCCCCCCCCCCH EWIDGVTRIQLRRAASDIGHVGDDQELTTLRAAVHQAPYPVWLQSDDARVTWTNLAYDRL HHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEECCCCEEEEEHHHHHHH NQKIRGRGNDTSAPLFPNLDAPMNSGRAERISIELPETDKKLWYNVSTTETEAGWLCHAM HHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCEEEEEE DVNAVVDAEIAQRNFVQTLAKTFAQLSIGLAIFDRNRQLVLFNPVLIDLTALPASFLSSR CCCCEECHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEECCCEEEHHHCCHHHHCCC PNMMSFFDRLRDQRMMPEPKNYSSWRHQMADLLEAAAEGRYQETWSLPSGSVYSVSGRPH CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCC PDGAIAFLFEDITAEITLTRQFRSELELGQSILDHIDDAFAVFGADGSMVYSNTAYHTMW CCCEEEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCEEEEEE KTDPDASFAKITITDACRTWQELSGPTPTWGEVRDFVAGGTSDRSDWWSRVDMRNGEQLL CCCCCCCEEEEEEHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHH CRVQSLQNGSVMVRFQQIDLPLAPPEQERFAVLKDS HHHHHCCCCCEEEEEEECCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10557274; 11259647 [H]