Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is yjeE [C]

Identifier: 99082682

GI number: 99082682

Start: 3010583

End: 3011059

Strand: Direct

Name: yjeE [C]

Synonym: TM1040_2842

Alternate gene names: 99082682

Gene position: 3010583-3011059 (Clockwise)

Preceding gene: 99082681

Following gene: 99082683

Centisome position: 94.05

GC content: 58.7

Gene sequence:

>477_bases
ATGACACAACGCTCTGCGACTTTCAGGCTGCCCAGCAGCGACGCAACCACAGAATTGGCTCGACACATCGCCCGGATCCT
CGTTCCGGGCGATGTTGTCTTGCTCCAGGGCCCAATCGGCGCCGGAAAAACGCATTTCGCCCGCAGCCTGATCCAATCTC
TGATGGAGGTGCCAGAAGACGTCCCCTCCCCTACGTTCACGCTGGTGCAAGTCTACAATGTCGCCACAGGAGAGCTTTGG
CATGCCGATCTCTACCGGCTCTCGCATGTAGATGAGGTCGAGGAGCTAGGGCTTTTGGCGGCATTTGAGGACGCGATCTG
CCTGATTGAATGGCCCGAGAAACTCGAAGATCTGCGCCCCGCGTCAGCACTGACAATGGAGCTCTCTTTAGACGAGGACC
ATGACGACGCCCGGATGGCCGAACTCATGTGGACTGACGCCTCTTGGGACGCGCGACTGGAAGGAATTGCGCCATGA

Upstream 100 bases:

>100_bases
TCGACCTGCCGCTGGCGCCGCCAGAACAAGAGCGTTTCGCCGTCCTCAAGGATAGCTGAACCCGCTTGCGGAGCCTCGCG
CTGAACGTCATTGTGGCGCC

Downstream 100 bases:

>100_bases
CATCTCGCGAGGACGAAATCAGAGATTTTCTGGCCACCCATGGCTATGCGGACTGGAACCGCACCCCACTGGCCGGAGAT
GCCTCCAGCCGTCGCTACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MTQRSATFRLPSSDATTELARHIARILVPGDVVLLQGPIGAGKTHFARSLIQSLMEVPEDVPSPTFTLVQVYNVATGELW
HADLYRLSHVDEVEELGLLAAFEDAICLIEWPEKLEDLRPASALTMELSLDEDHDDARMAELMWTDASWDARLEGIAP

Sequences:

>Translated_158_residues
MTQRSATFRLPSSDATTELARHIARILVPGDVVLLQGPIGAGKTHFARSLIQSLMEVPEDVPSPTFTLVQVYNVATGELW
HADLYRLSHVDEVEELGLLAAFEDAICLIEWPEKLEDLRPASALTMELSLDEDHDDARMAELMWTDASWDARLEGIAP
>Mature_157_residues
TQRSATFRLPSSDATTELARHIARILVPGDVVLLQGPIGAGKTHFARSLIQSLMEVPEDVPSPTFTLVQVYNVATGELWH
ADLYRLSHVDEVEELGLLAAFEDAICLIEWPEKLEDLRPASALTMELSLDEDHDDARMAELMWTDASWDARLEGIAP

Specific function: Unknown

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

Organism=Escherichia coli, GI1790610, Length=147, Percent_Identity=34.6938775510204, Blast_Score=88, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 17552; Mature: 17421

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQRSATFRLPSSDATTELARHIARILVPGDVVLLQGPIGAGKTHFARSLIQSLMEVPED
CCCCCCEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
VPSPTFTLVQVYNVATGELWHADLYRLSHVDEVEELGLLAAFEDAICLIEWPEKLEDLRP
CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHCCC
ASALTMELSLDEDHDDARMAELMWTDASWDARLEGIAP
CCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TQRSATFRLPSSDATTELARHIARILVPGDVVLLQGPIGAGKTHFARSLIQSLMEVPED
CCCCCEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
VPSPTFTLVQVYNVATGELWHADLYRLSHVDEVEELGLLAAFEDAICLIEWPEKLEDLRP
CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHCCC
ASALTMELSLDEDHDDARMAELMWTDASWDARLEGIAP
CCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA