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The map label for this gene is ybjT [C]

Identifier: 99082660

GI number: 99082660

Start: 2984942

End: 2985931

Strand: Direct

Name: ybjT [C]

Synonym: TM1040_2820

Alternate gene names: 99082660

Gene position: 2984942-2985931 (Clockwise)

Preceding gene: 99082659

Following gene: 99082662

Centisome position: 93.25

GC content: 57.17

Gene sequence:

>990_bases
ATGTCCAAACTGGTCACCATTTATGGCGGTTCAGGGTTTGTCGGTCGCTATATCGCGCGCCGCATGGCAAAAGAAGGCTG
GCGCGTGCGCGTGGCCGTTCGTCGCCCGAATGAGGCAATGCACGTCAAACCCTATGGTGTGCCGGGGCAGGTTGAGCCGG
TTTTCTGCAACATCCGCGATGACGCTTCTGTCGCTGCTGTTATGGCAGGCGCAGATGCGGTGGTAAATTGCGTGGGTGTT
CTGAACGAAGTCGGCAAAAACACGTTCTCTGCGGTGCAGTCCGAAGGGGCTGGTCGCATCGCGCGGATCGCGGCTGATAC
AGGTGTTGAACGTCTTGTTCATGTTTCTGCGATTGGTGCAGATGCTGATGGCGACAGCGCGTATGCCCGCACCAAGGCCG
AAGGGGAAGCTGCGGTGCTTGAAGCTTTTCCCTCTGCAATGATCCTGCGTCCCTCGATCATCTTTGGCCCCGAAGACCAG
TTCTTTAATCGCTTTGCGAGCATGACGCGCTTTGGCCCCGTTCTGCCCATCGCAGGAGGGACGACACGGTTTCAGCCGGT
CTATGTCGATGACGTCGCGAAAGCTGCTGTTGCGGGTCTGACTGGGCAGGCTGCTGCAGGAACCTATGAGCTTGGTGGCC
CCGAGGTCAAAAGCTTTACAGAGTTGATGTCGCAAATGCTTGATGTGATCCATCGCCGCCGTCTCGTTGTGTCGCTACCG
AATTTTGTCGCCCGCCTCATGGCTTTTGGGTTCGATATGGCGCAGGCGGTGACCTTTGGCCTGTTTACAAACGGCCTGCT
GACGCGCGACCAACTAAAGAACCTGCAAAACGACAATGTGGTCAGTGAAGGCGCCAAAGGTCTGGCAGACCTCGGGATCG
AACCGGTTACCATGGGGTCCGTTCTACCCGACTATCTGTGGAAGTTCCGCCCATCCGGTCAGTACGACGAATTGATGAAA
TCGGCCGGTAACCTGCGCGGAGACATCTGA

Upstream 100 bases:

>100_bases
CGGTTCCGACAAACAGCGTCGTTTTGACCTTTGTTTGACCTTGTTTGACGGGGGCCGGAGCGGTAAATCGGGACAACAGC
TACGCGAGAGGAGCCAAGTC

Downstream 100 bases:

>100_bases
CGCGGATCACTGGTCCTGGTGATTTGAAAGGTGCGACCCAGGTCGCGCCTTTTTTGTTTTAGCCATAGGCGATGAACAAC
AGCACCATACCGAGCGCCAC

Product: 3-beta hydroxysteroid dehydrogenase/isomerase

Products: NAD+; ubiquinol

Alternate protein names: NADH Dehydrogenase; NADH-Ubiquinone Oxidoreductase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Nucleoside-Diphosphate-Sugar Epimerase; Oxidoreductase; NADH-Ubiquinone Oxidoreductase Subunit; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; NADH-Ubiquinone Oxireductase; NADH-Ubiquinone Oxidoreductase Family Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family Protein; 3-Beta-Hydroxy-Delta(5)-Steroid Dehydrogenase; NADH Ubiquinone Oxidoreductase; NADH Dehydrogenase 1 Alpha Subcomplex; Dehydrogenase; NADH Dehydrogenase/NADH Dehydrogenase Protein; Ubiquinone Dependent NADH Dehydrogenase; NADH Dehydrogenase/Oxidoreductase-Like Protein; NADH Dehydrogenase-Like Protein; NAD Dependent Epimerase; NAD Dependent Epimerase/Dehydratase Family; NADH-Ubiquinone Oxidoreductase -Like Protein; NADH-Ubiquinone Oxidoreductase Putativ; NADH-Quinone Oxidoreductase

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MSKLVTIYGGSGFVGRYIARRMAKEGWRVRVAVRRPNEAMHVKPYGVPGQVEPVFCNIRDDASVAAVMAGADAVVNCVGV
LNEVGKNTFSAVQSEGAGRIARIAADTGVERLVHVSAIGADADGDSAYARTKAEGEAAVLEAFPSAMILRPSIIFGPEDQ
FFNRFASMTRFGPVLPIAGGTTRFQPVYVDDVAKAAVAGLTGQAAAGTYELGGPEVKSFTELMSQMLDVIHRRRLVVSLP
NFVARLMAFGFDMAQAVTFGLFTNGLLTRDQLKNLQNDNVVSEGAKGLADLGIEPVTMGSVLPDYLWKFRPSGQYDELMK
SAGNLRGDI

Sequences:

>Translated_329_residues
MSKLVTIYGGSGFVGRYIARRMAKEGWRVRVAVRRPNEAMHVKPYGVPGQVEPVFCNIRDDASVAAVMAGADAVVNCVGV
LNEVGKNTFSAVQSEGAGRIARIAADTGVERLVHVSAIGADADGDSAYARTKAEGEAAVLEAFPSAMILRPSIIFGPEDQ
FFNRFASMTRFGPVLPIAGGTTRFQPVYVDDVAKAAVAGLTGQAAAGTYELGGPEVKSFTELMSQMLDVIHRRRLVVSLP
NFVARLMAFGFDMAQAVTFGLFTNGLLTRDQLKNLQNDNVVSEGAKGLADLGIEPVTMGSVLPDYLWKFRPSGQYDELMK
SAGNLRGDI
>Mature_328_residues
SKLVTIYGGSGFVGRYIARRMAKEGWRVRVAVRRPNEAMHVKPYGVPGQVEPVFCNIRDDASVAAVMAGADAVVNCVGVL
NEVGKNTFSAVQSEGAGRIARIAADTGVERLVHVSAIGADADGDSAYARTKAEGEAAVLEAFPSAMILRPSIIFGPEDQF
FNRFASMTRFGPVLPIAGGTTRFQPVYVDDVAKAAVAGLTGQAAAGTYELGGPEVKSFTELMSQMLDVIHRRRLVVSLPN
FVARLMAFGFDMAQAVTFGLFTNGLLTRDQLKNLQNDNVVSEGAKGLADLGIEPVTMGSVLPDYLWKFRPSGQYDELMKS
AGNLRGDI

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6681764, Length=292, Percent_Identity=34.5890410958904, Blast_Score=151, Evalue=8e-37,
Organism=Caenorhabditis elegans, GI17556106, Length=316, Percent_Identity=30.379746835443, Blast_Score=128, Evalue=4e-30,
Organism=Drosophila melanogaster, GI24667554, Length=332, Percent_Identity=32.5301204819277, Blast_Score=140, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.6.5.3; 1.6.99.3

Molecular weight: Translated: 35200; Mature: 35069

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLVTIYGGSGFVGRYIARRMAKEGWRVRVAVRRPNEAMHVKPYGVPGQVEPVFCNIRD
CCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCCEEEECCCCCCCCCEEEEECCC
DASVAAVMAGADAVVNCVGVLNEVGKNTFSAVQSEGAGRIARIAADTGVERLVHVSAIGA
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHCCC
DADGDSAYARTKAEGEAAVLEAFPSAMILRPSIIFGPEDQFFNRFASMTRFGPVLPIAGG
CCCCCCHHHHCCCCCCHHHHHHCCCHHEECCCEEECCCHHHHHHHHHHHHCCCCEEECCC
TTRFQPVYVDDVAKAAVAGLTGQAAAGTYELGGPEVKSFTELMSQMLDVIHRRRLVVSLP
CCCCCEEEHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NFVARLMAFGFDMAQAVTFGLFTNGLLTRDQLKNLQNDNVVSEGAKGLADLGIEPVTMGS
HHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHH
VLPDYLWKFRPSGQYDELMKSAGNLRGDI
HHHHHHHHCCCCCCHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SKLVTIYGGSGFVGRYIARRMAKEGWRVRVAVRRPNEAMHVKPYGVPGQVEPVFCNIRD
CCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCCEEEECCCCCCCCCEEEEECCC
DASVAAVMAGADAVVNCVGVLNEVGKNTFSAVQSEGAGRIARIAADTGVERLVHVSAIGA
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHCCC
DADGDSAYARTKAEGEAAVLEAFPSAMILRPSIIFGPEDQFFNRFASMTRFGPVLPIAGG
CCCCCCHHHHCCCCCCHHHHHHCCCHHEECCCEEECCCHHHHHHHHHHHHCCCCEEECCC
TTRFQPVYVDDVAKAAVAGLTGQAAAGTYELGGPEVKSFTELMSQMLDVIHRRRLVVSLP
CCCCCEEEHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NFVARLMAFGFDMAQAVTFGLFTNGLLTRDQLKNLQNDNVVSEGAKGLADLGIEPVTMGS
HHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHH
VLPDYLWKFRPSGQYDELMKSAGNLRGDI
HHHHHHHHCCCCCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA