Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is yafP [C]

Identifier: 99082599

GI number: 99082599

Start: 2907826

End: 2908299

Strand: Reverse

Name: yafP [C]

Synonym: TM1040_2759

Alternate gene names: 99082599

Gene position: 2908299-2907826 (Counterclockwise)

Preceding gene: 99082600

Following gene: 99082597

Centisome position: 90.86

GC content: 62.24

Gene sequence:

>474_bases
ATGCTGATGCAGATCCGTCCGTTTGAACCCCGTGATGCTGTCGATTGGGCCCGCATTTTTCACACCGCTGTGCATGAGGT
GGGCGCGCGCGACTACACCCCGGAACAATGCGCTGCCTGGAGCCCGGAACCTGCCCCCGTTGACCGCGTGCTGGAACGTG
CGCAAGACGGGCGCCGCATTTGGGTTGCTGCCGATACACAAGATGTGGCGCAAGGGTTTATCGAGCTCGAACCCGACGGG
CATATCGACTGCTTCTATCTTGCGCCTGACGTTGCCGGTGCGGGCATTGGTGCGTCGCTTTATGCGCGACTGGAGCATGA
GGCGCGCAGCCTCGCGCTGGCCTCGCTCTTTGTCGAAGCCAGCGAGGCCGCGCGGCGTTTCTTTTTGCGCCAGGGATTTG
CCGAGGACCACCGGCGCGATTTTGAGCGCCGAGGCGTCAGGATCCACAACTACGCGATGTCAAAGACGCTCTGA

Upstream 100 bases:

>100_bases
TGCTCGAAGCGGTGCGGGCCGCCGGGATTTCAATCCGTGACGTCAAAACCGAAGAAGCCGACCTCGAGGATGTCTTCCTC
GCACTGACAAAGTCCCGCTG

Downstream 100 bases:

>100_bases
GGCTCAGCGCTCGATCCGGGCCTGATAGCAGTTGTTGCGTGCGGACCGGACGTGGATATAGCGCACATGCGGATCAGCAA
AGATTTTCTCTGCCTGCGCC

Product: acetyltransferase

Products: NA

Alternate protein names: Acetyltransferase; Acetyltransferase Gnat Family; Acetyltransferase GNAT Family; Acetyltransferase YafP; Acetyltransferase Protein; GNAT Family Acetyltransferase; Acyltransferase With Acyl-CoA N-Acyltransferase Domain; Histone Acetyltransferase HPA2-Like Acetyltransferase; GCN5-Like N-Acetyltransferase

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MLMQIRPFEPRDAVDWARIFHTAVHEVGARDYTPEQCAAWSPEPAPVDRVLERAQDGRRIWVAADTQDVAQGFIELEPDG
HIDCFYLAPDVAGAGIGASLYARLEHEARSLALASLFVEASEAARRFFLRQGFAEDHRRDFERRGVRIHNYAMSKTL

Sequences:

>Translated_157_residues
MLMQIRPFEPRDAVDWARIFHTAVHEVGARDYTPEQCAAWSPEPAPVDRVLERAQDGRRIWVAADTQDVAQGFIELEPDG
HIDCFYLAPDVAGAGIGASLYARLEHEARSLALASLFVEASEAARRFFLRQGFAEDHRRDFERRGVRIHNYAMSKTL
>Mature_157_residues
MLMQIRPFEPRDAVDWARIFHTAVHEVGARDYTPEQCAAWSPEPAPVDRVLERAQDGRRIWVAADTQDVAQGFIELEPDG
HIDCFYLAPDVAGAGIGASLYARLEHEARSLALASLFVEASEAARRFFLRQGFAEDHRRDFERRGVRIHNYAMSKTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.3.1.-

Molecular weight: Translated: 17810; Mature: 17810

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMQIRPFEPRDAVDWARIFHTAVHEVGARDYTPEQCAAWSPEPAPVDRVLERAQDGRRI
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHCCCCEE
WVAADTQDVAQGFIELEPDGHIDCFYLAPDVAGAGIGASLYARLEHEARSLALASLFVEA
EEEECHHHHHCCEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SEAARRFFLRQGFAEDHRRDFERRGVRIHNYAMSKTL
HHHHHHHHHHHCHHHHHHHHHHHCCCEEEEHHHHCCC
>Mature Secondary Structure
MLMQIRPFEPRDAVDWARIFHTAVHEVGARDYTPEQCAAWSPEPAPVDRVLERAQDGRRI
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHCCCCEE
WVAADTQDVAQGFIELEPDGHIDCFYLAPDVAGAGIGASLYARLEHEARSLALASLFVEA
EEEECHHHHHCCEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SEAARRFFLRQGFAEDHRRDFERRGVRIHNYAMSKTL
HHHHHHHHHHHCHHHHHHHHHHHCCCEEEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA